KEGG   PATHWAY: pleu03022
Entry
pleu03022                   Pathway                                
Name
Basal transcription factors - Peromyscus leucopus (white-footed mouse)
Class
Genetic Information Processing; Transcription
Pathway map
pleu03022  Basal transcription factors
pleu03022

Other DBs
GO: 0005668 0005669 0005672 0005673 0005674 0005675
Organism
Peromyscus leucopus (white-footed mouse) [GN:pleu]
Gene
114697648  Gtf2a1; transcription initiation factor IIA subunit 1 isoform X1 [KO:K03122]
114709313  Gtf2a1l; TFIIA-alpha and beta-like factor isoform X2 [KO:K03122]
114690885  Gtf2a2; transcription initiation factor IIA subunit 2 isoform X1 [KO:K03123]
114709783  Gtf2b; transcription initiation factor IIB [KO:K03124]
114691326  TATA-box-binding protein [KO:K03120]
114692728  Tbpl2; TATA box-binding protein-like 2 [KO:K03120]
114703673  Tbpl1; TATA box-binding protein-like 1 [KO:K03120]
114708632  Taf1; transcription initiation factor TFIID subunit 1 isoform X2 [KO:K03125] [EC:2.3.1.48 2.7.11.1]
114694437  LOW QUALITY PROTEIN: transcription initiation factor TFIID subunit 2-like [KO:K03128]
114694838  Taf2; transcription initiation factor TFIID subunit 2 isoform X1 [KO:K03128]
114687134  Taf7; transcription initiation factor TFIID subunit 7 [KO:K03132]
114699038  transcription initiation factor TFIID subunit 7-like [KO:K03132]
114696993  Taf7l; transcription initiation factor TFIID subunit 7-like isoform X1 [KO:K03132]
114705347  Taf8; transcription initiation factor TFIID subunit 8 [KO:K14649]
114708317  Taf3; transcription initiation factor TFIID subunit 3 [KO:K14650]
114683844  Taf10; transcription initiation factor TFIID subunit 10 [KO:K03134]
114694086  transcription initiation factor TFIID subunit 10-like [KO:K03134]
114682462  Taf5l; TAF5-like RNA polymerase II p300/CBP-associated factor-associated factor 65 kDa subunit 5L isoform X1 [KO:K03130]
114709595  TAF5-like RNA polymerase II p300/CBP-associated factor-associated factor 65 kDa subunit 5L [KO:K03130]
114696734  Taf5; transcription initiation factor TFIID subunit 5 [KO:K03130]
114686640  Taf4b; transcription initiation factor TFIID subunit 4B [KO:K03129]
114704217  Taf4; LOW QUALITY PROTEIN: transcription initiation factor TFIID subunit 4 [KO:K03129]
114705965  Taf12; transcription initiation factor TFIID subunit 12 isoform X1 [KO:K03126]
114683644  Taf6l; TAF6-like RNA polymerase II p300/CBP-associated factor-associated factor 65 kDa subunit 6L [KO:K03131]
114685020  Taf6; transcription initiation factor TFIID subunit 6 [KO:K03131]
114703676  LOW QUALITY PROTEIN: transcription initiation factor TFIID subunit 6-like [KO:K03131]
114700403  transcription initiation factor TFIID subunit 9 [KO:K14535]
114703863  Taf9; transcription initiation factor TFIID subunit 9 [KO:K14535]
114704887  Taf9b; transcription initiation factor TFIID subunit 9B isoform X1 [KO:K03133]
114706115  Taf11; transcription initiation factor TFIID subunit 11 [KO:K03135]
114699969  Taf13; transcription initiation factor TFIID subunit 13 [KO:K03127]
114707698  Taf15; LOW QUALITY PROTEIN: TATA-binding protein-associated factor 2N [KO:K14651]
114710721  Gtf2e1; general transcription factor IIE subunit 1 [KO:K03136]
114698494  Gtf2e2; transcription initiation factor IIE subunit beta [KO:K03137]
114687907  Gtf2f1; general transcription factor IIF subunit 1 isoform X1 [KO:K03138]
114704580  general transcription factor IIF subunit 2-like [KO:K03139] [EC:5.6.2.-]
114699319  Gtf2f2; general transcription factor IIF subunit 2 [KO:K03139] [EC:5.6.2.-]
114685653  Gtf2h1; general transcription factor IIH subunit 1 [KO:K03141]
114703868  general transcription factor IIH subunit 2 [KO:K03142]
114704510  Gtf2h3; general transcription factor IIH subunit 3 [KO:K03143]
114687015  Gtf2h4; general transcription factor IIH subunit 4 [KO:K03144]
114691642  Ercc3; general transcription and DNA repair factor IIH helicase subunit XPB [KO:K10843] [EC:5.6.2.4]
114709862  Ercc2; general transcription and DNA repair factor IIH helicase subunit XPD [KO:K10844] [EC:5.6.2.3]
114706271  Gtf2h5; general transcription factor IIH subunit 5 [KO:K10845]
114703858  Cdk7; cyclin-dependent kinase 7 isoform X1 [KO:K02202] [EC:2.7.11.22 2.7.11.23]
114683809  Mnat1; CDK-activating kinase assembly factor MAT1 [KO:K10842]
114710512  Ccnh; cyclin-H [KO:K06634]
114693651  Gtf2i; general transcription factor II-I isoform X1 [KO:K03121]
Reference
PMID:16858867
  Authors
Thomas MC, Chiang CM
  Title
The general transcription machinery and general cofactors.
  Journal
Crit Rev Biochem Mol Biol 41:105-78 (2006)
DOI:10.1080/10409230600648736
Reference
PMID:12516863
  Authors
Martinez E
  Title
Multi-protein complexes in eukaryotic gene transcription.
  Journal
Plant Mol Biol 50:925-47 (2002)
DOI:10.1023/A:1021258713850
Reference
PMID:19308322
  Authors
Cler E, Papai G, Schultz P, Davidson I
  Title
Recent advances in understanding the structure and function of general transcription factor TFIID.
  Journal
Cell Mol Life Sci 66:2123-34 (2009)
DOI:10.1007/s00018-009-0009-3
Reference
PMID:10838567
  Authors
Malik S, Roeder RG.
  Title
Transcriptional regulation through Mediator-like coactivators in yeast and metazoan cells.
  Journal
Trends Biochem Sci 25:277-283 (2000)
DOI:10.1016/S0968-0004(00)01596-6
Related
pathway
pleu03020  RNA polymerase
pleu03420  Nucleotide excision repair
KO pathway
ko03022   
LinkDB

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