KEGG   PATHWAY: pom00240
Entry
pom00240                    Pathway                                
Name
Pyrimidine metabolism - Polaribacter sp. MED152
Class
Metabolism; Nucleotide metabolism
Pathway map
pom00240  Pyrimidine metabolism
pom00240

Module
pom_M00052  Pyrimidine ribonucleotide biosynthesis, UMP => UDP/UTP,CDP/CTP [PATH:pom00240]
pom_M00053  Deoxyribonucleotide biosynthesis, ADP/GDP/CDP/UDP => dATP/dGTP/dCTP/dUTP [PATH:pom00240]
Other DBs
GO: 0006220 0006213
Organism
Polaribacter sp. MED152 [GN:pom]
Gene
MED152_13319  carB; carbamoyl-phosphate synthase, large subunit [KO:K01955] [EC:6.3.5.5]
MED152_12619  carA; carbamoyl-phosphate synthase small chain [KO:K01956] [EC:6.3.5.5]
MED152_13089  pyrB; aspartate carbamoyltransferase [KO:K00609] [EC:2.1.3.2]
MED152_03495  pyrC; dihydroorotase [KO:K01465] [EC:3.5.2.3]
MED152_08265  dihydroorotase [KO:K01465] [EC:3.5.2.3]
MED152_01405  pyrD; dihydroorotate dehydrogenase [KO:K00254] [EC:1.3.5.2]
MED152_12924  pyrE; orotate phosphoribosyltransferase [KO:K00762] [EC:2.4.2.10]
MED152_11579  pyrF; orotidine 5'-phosphate decarboxylase [KO:K01591] [EC:4.1.1.23]
MED152_11054  pyrH; uridylate kinase [KO:K09903] [EC:2.7.4.22]
MED152_01355  ndk; nucleoside diphosphate kinase [KO:K00940] [EC:2.7.4.6]
MED152_01820  maf; Maf-like protein [KO:K06287] [EC:3.6.1.-]
MED152_13304  ctrA; CTP synthase [KO:K01937] [EC:6.3.4.2]
MED152_00010  cmk; cytidylate kinase [KO:K00945] [EC:2.7.4.25]
MED152_05465  udk; uridine kinase [KO:K00876] [EC:2.7.1.48]
MED152_01670  phosphoesterase/5'-nucleotidase, C-terminal domain protein [KO:K11751] [EC:3.1.3.5 3.6.1.45]
MED152_06290  surE; stationary-phase survival acid phosphatase [KO:K03787] [EC:3.1.3.5 3.1.3.6]
MED152_00820  deoD; purine nucleoside phosphorylase II [KO:K00757] [EC:2.4.2.3]
MED152_09320  upp; uracil phosphoribosyltransferase [KO:K00761] [EC:2.4.2.9]
MED152_13094  pyrR; PyrR bifunctional protein [KO:K02825] [EC:2.4.2.9]
MED152_01140  phosphoribosyl transferase family [KO:K02825] [EC:2.4.2.9]
MED152_05550  cdd; cytidine deaminase [KO:K01489] [EC:3.5.4.5]
MED152_06645  ribonucleoside-diphosphate reductase large subunit [KO:K00525] [EC:1.17.4.1]
MED152_06650  ribonucleoside-diphosphate reductase small chain [KO:K00526] [EC:1.17.4.1]
MED152_11769  deoxynucleoside kinase [KO:K15519] [EC:2.7.1.76 2.7.1.74]
MED152_08975  deoxycytidylate deaminase [KO:K01493] [EC:3.5.4.12]
MED152_08725  dut; dUTPase [KO:K01520] [EC:3.6.1.23]
MED152_07745  tdk; thymidine kinase [KO:K00857] [EC:2.7.1.21]
MED152_11964  thyB; thymidylate synthase [KO:K00560] [EC:2.1.1.45]
MED152_08330  short chain dehydrogenase [KO:K16066] [EC:1.1.1.381 1.1.1.-]
Compound
C00015  UDP
C00039  DNA
C00046  RNA
C00055  CMP
C00063  CTP
C00064  L-Glutamine
C00075  UTP
C00086  Urea
C00099  beta-Alanine
C00105  UMP
C00106  Uracil
C00112  CDP
C00119  5-Phospho-alpha-D-ribose 1-diphosphate
C00169  Carbamoyl phosphate
C00178  Thymine
C00214  Thymidine
C00222  3-Oxopropanoate
C00239  dCMP
C00295  Orotate
C00299  Uridine
C00337  (S)-Dihydroorotate
C00363  dTDP
C00364  dTMP
C00365  dUMP
C00380  Cytosine
C00383  Malonate
C00429  5,6-Dihydrouracil
C00438  N-Carbamoyl-L-aspartate
C00458  dCTP
C00459  dTTP
C00460  dUTP
C00475  Cytidine
C00526  Deoxyuridine
C00672  2-Deoxy-D-ribose 1-phosphate
C00705  dCDP
C00813  Barbiturate
C00881  Deoxycytidine
C00941  3',5'-Cyclic CMP
C01013  3-Hydroxypropanoate
C01103  Orotidine 5'-phosphate
C01168  Pseudouridine 5'-phosphate
C01205  (R)-3-Amino-2-methylpropanoate
C01346  dUDP
C01368  3'-UMP
C01563  Carbamate
C02067  Pseudouridine
C02170  Methylmalonate
C02354  2',3'-Cyclic CMP
C02355  2',3'-Cyclic UMP
C02376  5-Methylcytosine
C02642  3-Ureidopropionate
C03997  5-Hydroxymethyldeoxycytidylate
C05281  5-Methylbarbiturate
C05822  3'-CMP
C06198  P1,P4-Bis(5'-uridyl) tetraphosphate
C11038  2'-Deoxy-5-hydroxymethylcytidine-5'-diphosphate
C11039  2'-Deoxy-5-hydroxymethylcytidine-5'-triphosphate
C15607  3-Oxo-3-ureidopropanoate
C20231  (Z)-3-Ureidoacrylate peracid
C20249  (Z)-3-Peroxyaminoacrylate
C20253  Aminoacrylate
C20254  Ureidoacrylate
C20846  3-Oxo-3-ureidoisobutyrate
C21028  (R)-5,6-Dihydrothymine
C21029  (R)-3-Ureidoisobutyrate
C22509  3',5'-Cyclic UMP
Related
pathway
pom00030  Pentose phosphate pathway
pom00220  Arginine biosynthesis
pom00250  Alanine, aspartate and glutamate metabolism
pom00280  Valine, leucine and isoleucine degradation
pom00410  beta-Alanine metabolism
KO pathway
ko00240   
LinkDB

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