KEGG   PATHWAY: pop01210
Entry
pop01210                    Pathway                                
Name
2-Oxocarboxylic acid metabolism - Populus trichocarpa (black cottonwood)
Description
2-Oxocarboxylic acids, also called 2-oxo acids and alpha-keto acids, are the most elementary set of metabolites that includes pyruvate (2-oxopropanoate), 2-oxobutanoate, oxaloacetate (2-oxosuccinate) and 2-oxoglutarate. This diagram illustrates the architecture of chain extension and modification reaction modules for 2-oxocarboxylic acids. The chain extension module RM001 is a tricarboxylic pathway where acetyl-CoA derived carbon is used to extend the chain length by one. The chain modification modules RM002 (including RM032) and RM033, together with a reductive amination step (RC00006 or RC00036), generate basic and branched-chain amino acids, respectively. The modification module RM030 is used in the biosynthesis of glucosinolates, a class of plant secondary metabolites, for conversion to oxime followed by addition of thio-glucose moiety. Furthermore, the chain extension from 2-oxoadipate to 2-oxosuberate is followed by coenzyme B biosynthesis in methonogenic archaea.
Class
Pathway map
pop01210  2-Oxocarboxylic acid metabolism
pop01210

Module
pop_M00010  Citrate cycle, first carbon oxidation, oxaloacetate => 2-oxoglutarate [PATH:pop01210]
pop_M00019  Valine/isoleucine biosynthesis, pyruvate => valine / 2-oxobutanoate => isoleucine [PATH:pop01210]
pop_M00028  Ornithine biosynthesis, glutamate => ornithine [PATH:pop01210]
pop_M00307  Pyruvate oxidation, pyruvate => acetyl-CoA [PATH:pop01210]
pop_M00432  Leucine biosynthesis, 2-oxoisovalerate => 2-oxoisocaproate [PATH:pop01210]
Organism
Populus trichocarpa (black cottonwood) [GN:pop]
Related
pathway
pop00020  Citrate cycle (TCA cycle)
pop00220  Arginine biosynthesis
pop00250  Alanine, aspartate and glutamate metabolism
pop00260  Glycine, serine and threonine metabolism
pop00270  Cysteine and methionine metabolism
pop00290  Valine, leucine and isoleucine biosynthesis
pop00300  Lysine biosynthesis
pop00310  Lysine degradation
pop00620  Pyruvate metabolism
pop00640  Propanoate metabolism
pop00966  Glucosinolate biosynthesis
KO pathway
ko01210   
LinkDB

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