PATHWAY: ppab01100 Help Entry ppab01100                   Pathway                                 Name Metabolic pathways - Paenibacillus pabuli Class BRITE hierarchy Pathway map ppab01100   Metabolic pathways Module ppab_M00001   Glycolysis (Embden-Meyerhof pathway), glucose => pyruvate [PATH:ppab01100] ppab_M00002   Glycolysis, core module involving three-carbon compounds [PATH:ppab01100] ppab_M00004   Pentose phosphate pathway (Pentose phosphate cycle) [PATH:ppab01100] ppab_M00005   PRPP biosynthesis, ribose 5P => PRPP [PATH:ppab01100] ppab_M00006   Pentose phosphate pathway, oxidative phase, glucose 6P => ribulose 5P [PATH:ppab01100] ppab_M00007   Pentose phosphate pathway, non-oxidative phase, fructose 6P => ribose 5P [PATH:ppab01100] ppab_M00009   Citrate cycle (TCA cycle, Krebs cycle) [PATH:ppab01100] ppab_M00010   Citrate cycle, first carbon oxidation, oxaloacetate => 2-oxoglutarate [PATH:ppab01100] ppab_M00011   Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate [PATH:ppab01100] ppab_M00015   Proline biosynthesis, glutamate => proline [PATH:ppab01100] ppab_M00017   Methionine biosynthesis, aspartate => homoserine => methionine [PATH:ppab01100] ppab_M00018   Threonine biosynthesis, aspartate => homoserine => threonine [PATH:ppab01100] ppab_M00019   Valine/isoleucine biosynthesis, pyruvate => valine / 2-oxobutanoate => isoleucine [PATH:ppab01100] ppab_M00020   Serine biosynthesis, glycerate-3P => serine [PATH:ppab01100] ppab_M00021   Cysteine biosynthesis, serine => cysteine [PATH:ppab01100] ppab_M00022   Shikimate pathway, phosphoenolpyruvate + erythrose-4P => chorismate [PATH:ppab01100] ppab_M00026   Histidine biosynthesis, PRPP => histidine [PATH:ppab01100] ppab_M00028   Ornithine biosynthesis, glutamate => ornithine [PATH:ppab01100] ppab_M00034   Methionine salvage pathway [PATH:ppab01100] ppab_M00046   Pyrimidine degradation, uracil => beta-alanine, thymine => 3-aminoisobutanoate [PATH:ppab01100] ppab_M00048   De novo purine biosynthesis, PRPP + glutamine => IMP [PATH:ppab01100] ppab_M00049   Adenine ribonucleotide biosynthesis, IMP => ADP,ATP [PATH:ppab01100] ppab_M00050   Guanine ribonucleotide biosynthesis, IMP => GDP,GTP [PATH:ppab01100] ppab_M00052   Pyrimidine ribonucleotide biosynthesis, UMP => UDP/UTP,CDP/CTP [PATH:ppab01100] ppab_M00053   Deoxyribonucleotide biosynthesis, ADP/GDP/CDP/UDP => dATP/dGTP/dCTP/dUTP [PATH:ppab01100] ppab_M00082   Fatty acid biosynthesis, initiation [PATH:ppab01100] ppab_M00083   Fatty acid biosynthesis, elongation [PATH:ppab01100] ppab_M00093   Phosphatidylethanolamine (PE) biosynthesis, PA => PS => PE [PATH:ppab01100] ppab_M00096   C5 isoprenoid biosynthesis, non-mevalonate pathway [PATH:ppab01100] ppab_M00115   NAD biosynthesis, aspartate => quinolinate => NAD [PATH:ppab01100] ppab_M00119   Pantothenate biosynthesis, valine/L-aspartate => pantothenate [PATH:ppab01100] ppab_M00120   Coenzyme A biosynthesis, pantothenate => CoA [PATH:ppab01100] ppab_M00123   Biotin biosynthesis, pimeloyl-ACP/CoA => biotin [PATH:ppab01100] ppab_M00125   Riboflavin biosynthesis, plants and bacteria, GTP => riboflavin/FMN/FAD [PATH:ppab01100] ppab_M00126   Tetrahydrofolate biosynthesis, GTP => THF [PATH:ppab01100] ppab_M00133   Polyamine biosynthesis, arginine => agmatine => putrescine => spermidine [PATH:ppab01100] ppab_M00151   Cytochrome bc1 complex respiratory unit [PATH:ppab01100] ppab_M00155   Cytochrome c oxidase, prokaryotes [PATH:ppab01100] ppab_M00157   F-type ATPase, prokaryotes and chloroplasts [PATH:ppab01100] ppab_M00168   CAM (Crassulacean acid metabolism), dark [PATH:ppab01100] ppab_M00176   Assimilatory sulfate reduction, sulfate => H2S [PATH:ppab01100] ppab_M00307   Pyruvate oxidation, pyruvate => acetyl-CoA [PATH:ppab01100] ppab_M00345   Formaldehyde assimilation, ribulose monophosphate pathway [PATH:ppab01100] ppab_M00364   C10-C20 isoprenoid biosynthesis, bacteria [PATH:ppab01100] ppab_M00432   Leucine biosynthesis, 2-oxoisovalerate => 2-oxoisocaproate [PATH:ppab01100] ppab_M00526   Lysine biosynthesis, DAP dehydrogenase pathway, aspartate => lysine [PATH:ppab01100] ppab_M00527   Lysine biosynthesis, DAP aminotransferase pathway, aspartate => lysine [PATH:ppab01100] ppab_M00531   Assimilatory nitrate reduction, nitrate => ammonia [PATH:ppab01100] ppab_M00549   Nucleotide sugar biosynthesis, glucose => UDP-glucose [PATH:ppab01100] ppab_M00554   Nucleotide sugar biosynthesis, galactose => UDP-galactose [PATH:ppab01100] ppab_M00570   Isoleucine biosynthesis, threonine => 2-oxobutanoate => isoleucine [PATH:ppab01100] ppab_M00579   Phosphate acetyltransferase-acetate kinase pathway, acetyl-CoA => acetate [PATH:ppab01100] ppab_M00580   Pentose phosphate pathway, archaea, fructose 6P => ribose 5P [PATH:ppab01100] ppab_M00621   Glycine cleavage system [PATH:ppab01100] ppab_M00631   D-Galacturonate degradation (bacteria), D-galacturonate => pyruvate + D-glyceraldehyde 3P [PATH:ppab01100] ppab_M00632   Galactose degradation, Leloir pathway, galactose => alpha-D-glucose-1P [PATH:ppab01100] ppab_M00793   dTDP-L-rhamnose biosynthesis [PATH:ppab01100] ppab_M00844   Arginine biosynthesis, ornithine => arginine [PATH:ppab01100] ppab_M00854   Glycogen biosynthesis, glucose-1P => glycogen/starch [PATH:ppab01100] ppab_M00880   Molybdenum cofactor biosynthesis, GTP => molybdenum cofactor [PATH:ppab01100] ppab_M00881   Lipoic acid biosynthesis, plants and bacteria, octanoyl-ACP => dihydrolipoyl-E2/H [PATH:ppab01100] ppab_M00899   Thiamine salvage pathway, HMP/HET => TMP [PATH:ppab01100] ppab_M00909   UDP-N-acetyl-D-glucosamine biosynthesis, prokaryotes, glucose => UDP-GlcNAc [PATH:ppab01100] ppab_M00916   Pyridoxal-P biosynthesis, R5P + glyceraldehyde-3P + glutamine => pyridoxal-P [PATH:ppab01100] ppab_M00926   Heme biosynthesis, bacteria, glutamyl-tRNA => coproporphyrin III => heme [PATH:ppab01100] ppab_M00938   Pyrimidine deoxyribonucleotide biosynthesis, UDP => dTTP [PATH:ppab01100] ppab_M00949   Staphylopine biosynthesis, L-histidine => staphylopine [PATH:ppab01100] ppab_M00970   Proline degradation, proline => glutamate [PATH:ppab01100] ppab_M00972   Proline metabolism [PATH:ppab01100] Organism Paenibacillus pabuli [GN:ppab] Related pathway ppab00010   Glycolysis / Gluconeogenesis ppab00020   Citrate cycle (TCA cycle) ppab00030   Pentose phosphate pathway ppab00040   Pentose and glucuronate interconversions ppab00051   Fructose and mannose metabolism ppab00052   Galactose metabolism ppab00053   Ascorbate and aldarate metabolism ppab00061   Fatty acid biosynthesis ppab00071   Fatty acid degradation ppab00130   Ubiquinone and other terpenoid-quinone biosynthesis ppab00190   Oxidative phosphorylation ppab00220   Arginine biosynthesis ppab00230   Purine metabolism ppab00240   Pyrimidine metabolism ppab00250   Alanine, aspartate and glutamate metabolism ppab00260   Glycine, serine and threonine metabolism ppab00261   Monobactam biosynthesis ppab00270   Cysteine and methionine metabolism ppab00280   Valine, leucine and isoleucine degradation ppab00290   Valine, leucine and isoleucine biosynthesis ppab00300   Lysine biosynthesis ppab00310   Lysine degradation ppab00330   Arginine and proline metabolism ppab00332   Carbapenem biosynthesis ppab00340   Histidine metabolism ppab00350   Tyrosine metabolism ppab00360   Phenylalanine metabolism ppab00362   Benzoate degradation ppab00380   Tryptophan metabolism ppab00400   Phenylalanine, tyrosine and tryptophan biosynthesis ppab00401   Novobiocin biosynthesis ppab00410   beta-Alanine metabolism ppab00430   Taurine and hypotaurine metabolism ppab00450   Selenocompound metabolism ppab00460   Cyanoamino acid metabolism ppab00470   D-Amino acid metabolism ppab00480   Glutathione metabolism ppab00500   Starch and sucrose metabolism ppab00511   Other glycan degradation ppab00520   Amino sugar and nucleotide sugar metabolism ppab00521   Streptomycin biosynthesis ppab00523   Polyketide sugar unit biosynthesis ppab00525   Acarbose and validamycin biosynthesis ppab00540   Lipopolysaccharide biosynthesis ppab00541   O-Antigen nucleotide sugar biosynthesis ppab00542   O-Antigen repeat unit biosynthesis ppab00543   Exopolysaccharide biosynthesis ppab00550   Peptidoglycan biosynthesis ppab00552   Teichoic acid biosynthesis ppab00561   Glycerolipid metabolism ppab00562   Inositol phosphate metabolism ppab00564   Glycerophospholipid metabolism ppab00600   Sphingolipid metabolism ppab00620   Pyruvate metabolism ppab00621   Dioxin degradation ppab00622   Xylene degradation ppab00625   Chloroalkane and chloroalkene degradation ppab00626   Naphthalene degradation ppab00627   Aminobenzoate degradation ppab00630   Glyoxylate and dicarboxylate metabolism ppab00633   Nitrotoluene degradation ppab00640   Propanoate metabolism ppab00643   Styrene degradation ppab00650   Butanoate metabolism ppab00660   C5-Branched dibasic acid metabolism ppab00670   One carbon pool by folate ppab00680   Methane metabolism ppab00710   Carbon fixation by Calvin cycle ppab00720   Other carbon fixation pathways ppab00730   Thiamine metabolism ppab00740   Riboflavin metabolism ppab00750   Vitamin B6 metabolism ppab00760   Nicotinate and nicotinamide metabolism ppab00770   Pantothenate and CoA biosynthesis ppab00780   Biotin metabolism ppab00785   Lipoic acid metabolism ppab00790   Folate biosynthesis ppab00860   Porphyrin metabolism ppab00900   Terpenoid backbone biosynthesis ppab00906   Carotenoid biosynthesis ppab00910   Nitrogen metabolism ppab00920   Sulfur metabolism ppab00946   Degradation of flavonoids ppab00997   Biosynthesis of various other secondary metabolites ppab00998   Biosynthesis of various antibiotics ppab00999   Biosynthesis of various plant secondary metabolites ppab01053   Biosynthesis of siderophore group nonribosomal peptides KO pathway ko01100     LinkDB All DBs

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