KEGG   PATHWAY: pseb00010
Entry
pseb00010                   Pathway                                
Name
Glycolysis / Gluconeogenesis - Pseudorhodobacter turbinis
Description
Glycolysis is the process of converting glucose into pyruvate and generating small amounts of ATP (energy) and NADH (reducing power). It is a central pathway that produces important precursor metabolites: six-carbon compounds of glucose-6P and fructose-6P and three-carbon compounds of glycerone-P, glyceraldehyde-3P, glycerate-3P, phosphoenolpyruvate, and pyruvate [MD:M00001]. Acetyl-CoA, another important precursor metabolite, is produced by oxidative decarboxylation of pyruvate [MD:M00307]. When the enzyme genes of this pathway are examined in completely sequenced genomes, the reaction steps of three-carbon compounds from glycerone-P to pyruvate form a conserved core module [MD:M00002], which is found in almost all organisms and which sometimes contains operon structures in bacterial genomes. Gluconeogenesis is a synthesis pathway of glucose from noncarbohydrate precursors. It is essentially a reversal of glycolysis with minor variations of alternative paths [MD:M00003].
Class
Metabolism; Carbohydrate metabolism
Pathway map
pseb00010  Glycolysis / Gluconeogenesis
pseb00010

Module
pseb_M00002  Glycolysis, core module involving three-carbon compounds [PATH:pseb00010]
pseb_M00003  Gluconeogenesis, oxaloacetate => fructose-6P [PATH:pseb00010]
pseb_M00307  Pyruvate oxidation, pyruvate => acetyl-CoA [PATH:pseb00010]
Other DBs
GO: 0006096 0006094
Organism
Pseudorhodobacter turbinis [GN:pseb]
Gene
EOK75_13590  glucokinase [KO:K00845] [EC:2.7.1.2]
EOK75_20090  glucose-6-phosphate isomerase [KO:K01810] [EC:5.3.1.9]
EOK75_12445  glpX; class II fructose-bisphosphatase [KO:K11532] [EC:3.1.3.11 3.1.3.37]
EOK75_01635  fructose bisphosphate aldolase [KO:K01623] [EC:4.1.2.13]
EOK75_09530  class II fructose-bisphosphate aldolase [KO:K01624] [EC:4.1.2.13]
EOK75_13845  triose-phosphate isomerase [KO:K01803] [EC:5.3.1.1]
EOK75_13335  gap; type I glyceraldehyde-3-phosphate dehydrogenase [KO:K00134] [EC:1.2.1.12]
EOK75_13340  gap; type I glyceraldehyde-3-phosphate dehydrogenase [KO:K00134] [EC:1.2.1.12]
EOK75_11800  aldehyde dehydrogenase [KO:K00134] [EC:1.2.1.12]
EOK75_01640  phosphoglycerate kinase [KO:K00927] [EC:2.7.2.3]
EOK75_09730  2,3-bisphosphoglycerate-independent phosphoglycerate mutase [KO:K15633] [EC:5.4.2.12]
EOK75_01670  phosphopyruvate hydratase [KO:K01689] [EC:4.2.1.11]
EOK75_07900  pyk; pyruvate kinase [KO:K00873] [EC:2.7.1.40]
EOK75_14460  pyruvate, phosphate dikinase [KO:K01006] [EC:2.7.9.1]
EOK75_19165  transketolase [KO:K00163] [EC:1.2.4.1]
EOK75_06775  transketolase [KO:K00163] [EC:1.2.4.1]
EOK75_01625  pdhA; pyruvate dehydrogenase (acetyl-transferring) E1 component subunit alpha [KO:K00161] [EC:1.2.4.1]
EOK75_01620  pyruvate dehydrogenase complex E1 component subunit beta [KO:K00162] [EC:1.2.4.1]
EOK75_01615  pyruvate dehydrogenase complex dihydrolipoamide acetyltransferase [KO:K00627] [EC:2.3.1.12]
EOK75_13280  lpdA; dihydrolipoyl dehydrogenase [KO:K00382] [EC:1.8.1.4]
EOK75_19545  lpdA; dihydrolipoyl dehydrogenase [KO:K00382] [EC:1.8.1.4]
EOK75_09450  lpdA; dihydrolipoyl dehydrogenase [KO:K00382] [EC:1.8.1.4]
EOK75_18925  dihydrolipoyl dehydrogenase [KO:K00382] [EC:1.8.1.4]
EOK75_15560  S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase [KO:K00121] [EC:1.1.1.284 1.1.1.1]
EOK75_07340  S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase [KO:K00121] [EC:1.1.1.284 1.1.1.1]
EOK75_07575  aldehyde dehydrogenase family protein [KO:K00128] [EC:1.2.1.3]
EOK75_09805  aldehyde dehydrogenase family protein [KO:K00128] [EC:1.2.1.3]
EOK75_16240  aldehyde dehydrogenase family protein [KO:K00128] [EC:1.2.1.3]
EOK75_00370  aldehyde dehydrogenase family protein [KO:K00128] [EC:1.2.1.3]
EOK75_18685  aldehyde dehydrogenase [KO:K00128] [EC:1.2.1.3]
EOK75_00945  aldehyde dehydrogenase [KO:K00138] [EC:1.2.1.-]
EOK75_03295  AMP-dependent synthetase [KO:K01895] [EC:6.2.1.1]
EOK75_05150  acs; acetate--CoA ligase [KO:K01895] [EC:6.2.1.1]
EOK75_14580  acetate--CoA ligase family protein [KO:K24012] [EC:6.2.1.13]
EOK75_18820  acetate--CoA ligase family protein [KO:K24012] [EC:6.2.1.13]
EOK75_06635  acetate--CoA ligase family protein [KO:K24012] [EC:6.2.1.13]
EOK75_13585  alpha-D-glucose phosphate-specific phosphoglucomutase [KO:K01835] [EC:5.4.2.2]
EOK75_15205  phosphoenolpyruvate carboxykinase [KO:K01610] [EC:4.1.1.49]
Compound
C00022  Pyruvate
C00024  Acetyl-CoA
C00031  D-Glucose
C00033  Acetate
C00036  Oxaloacetate
C00068  Thiamin diphosphate
C00074  Phosphoenolpyruvate
C00084  Acetaldehyde
C00085  D-Fructose 6-phosphate
C00103  D-Glucose 1-phosphate
C00111  Glycerone phosphate
C00118  D-Glyceraldehyde 3-phosphate
C00186  (S)-Lactate
C00197  3-Phospho-D-glycerate
C00221  beta-D-Glucose
C00236  3-Phospho-D-glyceroyl phosphate
C00267  alpha-D-Glucose
C00354  D-Fructose 1,6-bisphosphate
C00469  Ethanol
C00631  2-Phospho-D-glycerate
C00668  alpha-D-Glucose 6-phosphate
C01159  2,3-Bisphospho-D-glycerate
C01172  beta-D-Glucose 6-phosphate
C01451  Salicin
C05125  2-(alpha-Hydroxyethyl)thiamine diphosphate
C06186  Arbutin
C06187  Arbutin 6-phosphate
C06188  Salicin 6-phosphate
C15972  Enzyme N6-(lipoyl)lysine
C15973  Enzyme N6-(dihydrolipoyl)lysine
C16255  [Dihydrolipoyllysine-residue acetyltransferase] S-acetyldihydrolipoyllysine
Reference
  Authors
Nishizuka Y (ed).
  Title
[Metabolic Maps] (In Japanese)
  Journal
Tokyo Kagaku Dojin (1980)
Reference
  Authors
Nishizuka Y, Seyama Y, Ikai A, Ishimura Y, Kawaguchi A (eds).
  Title
[Cellular Functions and Metabolic Maps] (In Japanese)
  Journal
Tokyo Kagaku Dojin (1997)
Reference
  Authors
Michal G.
  Title
Biochemical Pathways
  Journal
Wiley (1999)
Related
pathway
pseb00020  Citrate cycle (TCA cycle)
pseb00030  Pentose phosphate pathway
pseb00500  Starch and sucrose metabolism
pseb00620  Pyruvate metabolism
pseb00640  Propanoate metabolism
KO pathway
ko00010   
LinkDB

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