PATHWAY: psk01100 Help Entry psk01100                    Pathway                                 Name Metabolic pathways - Pseudomonas sp. TKP Class BRITE hierarchy Pathway map psk01100   Metabolic pathways Module psk_M00002   Glycolysis, core module involving three-carbon compounds [PATH:psk01100] psk_M00003   Gluconeogenesis, oxaloacetate => fructose-6P [PATH:psk01100] psk_M00004   Pentose phosphate pathway (Pentose phosphate cycle) [PATH:psk01100] psk_M00005   PRPP biosynthesis, ribose 5P => PRPP [PATH:psk01100] psk_M00006   Pentose phosphate pathway, oxidative phase, glucose 6P => ribulose 5P [PATH:psk01100] psk_M00007   Pentose phosphate pathway, non-oxidative phase, fructose 6P => ribose 5P [PATH:psk01100] psk_M00008   Entner-Doudoroff pathway, glucose-6P => glyceraldehyde-3P + pyruvate [PATH:psk01100] psk_M00009   Citrate cycle (TCA cycle, Krebs cycle) [PATH:psk01100] psk_M00010   Citrate cycle, first carbon oxidation, oxaloacetate => 2-oxoglutarate [PATH:psk01100] psk_M00011   Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate [PATH:psk01100] psk_M00015   Proline biosynthesis, glutamate => proline [PATH:psk01100] psk_M00016   Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine [PATH:psk01100] psk_M00018   Threonine biosynthesis, aspartate => homoserine => threonine [PATH:psk01100] psk_M00019   Valine/isoleucine biosynthesis, pyruvate => valine / 2-oxobutanoate => isoleucine [PATH:psk01100] psk_M00020   Serine biosynthesis, glycerate-3P => serine [PATH:psk01100] psk_M00021   Cysteine biosynthesis, serine => cysteine [PATH:psk01100] psk_M00022   Shikimate pathway, phosphoenolpyruvate + erythrose-4P => chorismate [PATH:psk01100] psk_M00023   Tryptophan biosynthesis, chorismate => tryptophan [PATH:psk01100] psk_M00024   Phenylalanine biosynthesis, chorismate => phenylpyruvate => phenylalanine [PATH:psk01100] psk_M00028   Ornithine biosynthesis, glutamate => ornithine [PATH:psk01100] psk_M00035   Methionine degradation [PATH:psk01100] psk_M00036   Leucine degradation, leucine => acetoacetate + acetyl-CoA [PATH:psk01100] psk_M00040   Tyrosine biosynthesis, chorismate => arogenate => tyrosine [PATH:psk01100] psk_M00044   Tyrosine degradation, tyrosine => homogentisate [PATH:psk01100] psk_M00045   Histidine degradation, histidine => N-formiminoglutamate => glutamate [PATH:psk01100] psk_M00046   Pyrimidine degradation, uracil => beta-alanine, thymine => 3-aminoisobutanoate [PATH:psk01100] psk_M00048   De novo purine biosynthesis, PRPP + glutamine => IMP [PATH:psk01100] psk_M00049   Adenine ribonucleotide biosynthesis, IMP => ADP,ATP [PATH:psk01100] psk_M00050   Guanine ribonucleotide biosynthesis, IMP => GDP,GTP [PATH:psk01100] psk_M00052   Pyrimidine ribonucleotide biosynthesis, UMP => UDP/UTP,CDP/CTP [PATH:psk01100] psk_M00053   Deoxyribonucleotide biosynthesis, ADP/GDP/CDP/UDP => dATP/dGTP/dCTP/dUTP [PATH:psk01100] psk_M00063   CMP-KDO biosynthesis [PATH:psk01100] psk_M00082   Fatty acid biosynthesis, initiation [PATH:psk01100] psk_M00083   Fatty acid biosynthesis, elongation [PATH:psk01100] psk_M00086   beta-Oxidation, acyl-CoA synthesis [PATH:psk01100] psk_M00087   beta-Oxidation [PATH:psk01100] psk_M00093   Phosphatidylethanolamine (PE) biosynthesis, PA => PS => PE [PATH:psk01100] psk_M00115   NAD biosynthesis, aspartate => quinolinate => NAD [PATH:psk01100] psk_M00117   Ubiquinone biosynthesis, prokaryotes, chorismate (+ polyprenyl-PP) => ubiquinol [PATH:psk01100] psk_M00118   Glutathione biosynthesis, glutamate => glutathione [PATH:psk01100] psk_M00120   Coenzyme A biosynthesis, pantothenate => CoA [PATH:psk01100] psk_M00121   Heme biosynthesis, plants and bacteria, glutamate => heme [PATH:psk01100] psk_M00122   Cobalamin biosynthesis, cobyrinate a,c-diamide => cobalamin [PATH:psk01100] psk_M00123   Biotin biosynthesis, pimeloyl-ACP/CoA => biotin [PATH:psk01100] psk_M00124   Pyridoxal-P biosynthesis, erythrose-4P => pyridoxal-P [PATH:psk01100] psk_M00125   Riboflavin biosynthesis, plants and bacteria, GTP => riboflavin/FMN/FAD [PATH:psk01100] psk_M00126   Tetrahydrofolate biosynthesis, GTP => THF [PATH:psk01100] psk_M00144   NADH:quinone oxidoreductase, prokaryotes [PATH:psk01100] psk_M00149   Succinate dehydrogenase, prokaryotes [PATH:psk01100] psk_M00151   Cytochrome bc1 complex respiratory unit [PATH:psk01100] psk_M00155   Cytochrome c oxidase, prokaryotes [PATH:psk01100] psk_M00156   Cytochrome c oxidase, cbb3-type [PATH:psk01100] psk_M00157   F-type ATPase, prokaryotes and chloroplasts [PATH:psk01100] psk_M00176   Assimilatory sulfate reduction, sulfate => H2S [PATH:psk01100] psk_M00307   Pyruvate oxidation, pyruvate => acetyl-CoA [PATH:psk01100] psk_M00338   Cysteine biosynthesis, homocysteine + serine => cysteine [PATH:psk01100] psk_M00417   Cytochrome o ubiquinol oxidase [PATH:psk01100] psk_M00432   Leucine biosynthesis, 2-oxoisovalerate => 2-oxoisocaproate [PATH:psk01100] psk_M00529   Denitrification, nitrate => nitrogen [PATH:psk01100] psk_M00531   Assimilatory nitrate reduction, nitrate => ammonia [PATH:psk01100] psk_M00533   Homoprotocatechuate degradation, homoprotocatechuate => 2-oxohept-3-enedioate [PATH:psk01100] psk_M00549   Nucleotide sugar biosynthesis, glucose => UDP-glucose [PATH:psk01100] psk_M00552   D-galactonate degradation, De Ley-Doudoroff pathway, D-galactonate => glycerate-3P [PATH:psk01100] psk_M00555   Betaine biosynthesis, choline => betaine [PATH:psk01100] psk_M00570   Isoleucine biosynthesis, threonine => 2-oxobutanoate => isoleucine [PATH:psk01100] psk_M00572   Pimeloyl-ACP biosynthesis, BioC-BioH pathway, malonyl-ACP => pimeloyl-ACP [PATH:psk01100] psk_M00621   Glycine cleavage system [PATH:psk01100] psk_M00622   Nicotinate degradation, nicotinate => fumarate [PATH:psk01100] psk_M00793   dTDP-L-rhamnose biosynthesis [PATH:psk01100] psk_M00844   Arginine biosynthesis, ornithine => arginine [PATH:psk01100] psk_M00846   Siroheme biosynthesis, glutamyl-tRNA => siroheme [PATH:psk01100] psk_M00879   Arginine succinyltransferase pathway, arginine => glutamate [PATH:psk01100] psk_M00880   Molybdenum cofactor biosynthesis, GTP => molybdenum cofactor [PATH:psk01100] psk_M00881   Lipoic acid biosynthesis, plants and bacteria, octanoyl-ACP => dihydrolipoyl-E2/H [PATH:psk01100] psk_M00909   UDP-N-acetyl-D-glucosamine biosynthesis, prokaryotes, glucose => UDP-GlcNAc [PATH:psk01100] psk_M00938   Pyrimidine deoxyribonucleotide biosynthesis, UDP => dTTP [PATH:psk01100] psk_M00947   D-Arginine racemization, D-arginine => L-arginine [PATH:psk01100] psk_M00948   Hydroxyproline degradation, trans-4-hydroxy-L-proline => 2-oxoglutarate [PATH:psk01100] psk_M00957   Lysine degradation, bacteria, L-lysine => glutarate => succinate/acetyl-CoA [PATH:psk01100] psk_M00958   Adenine ribonucleotide degradation, AMP => Urate [PATH:psk01100] psk_M00959   Guanine ribonucleotide degradation, GMP => Urate [PATH:psk01100] psk_M00970   Proline degradation, proline => glutamate [PATH:psk01100] psk_M00975   Betaine degradation, bacteria, betaine => pyruvate [PATH:psk01100] Organism Pseudomonas sp. TKP [GN:psk] Related pathway psk00010   Glycolysis / Gluconeogenesis psk00020   Citrate cycle (TCA cycle) psk00030   Pentose phosphate pathway psk00040   Pentose and glucuronate interconversions psk00051   Fructose and mannose metabolism psk00052   Galactose metabolism psk00053   Ascorbate and aldarate metabolism psk00061   Fatty acid biosynthesis psk00071   Fatty acid degradation psk00130   Ubiquinone and other terpenoid-quinone biosynthesis psk00190   Oxidative phosphorylation psk00220   Arginine biosynthesis psk00230   Purine metabolism psk00240   Pyrimidine metabolism psk00250   Alanine, aspartate and glutamate metabolism psk00260   Glycine, serine and threonine metabolism psk00261   Monobactam biosynthesis psk00270   Cysteine and methionine metabolism psk00280   Valine, leucine and isoleucine degradation psk00290   Valine, leucine and isoleucine biosynthesis psk00300   Lysine biosynthesis psk00310   Lysine degradation psk00330   Arginine and proline metabolism psk00332   Carbapenem biosynthesis psk00340   Histidine metabolism psk00350   Tyrosine metabolism psk00360   Phenylalanine metabolism psk00361   Chlorocyclohexane and chlorobenzene degradation psk00362   Benzoate degradation psk00364   Fluorobenzoate degradation psk00365   Furfural degradation psk00380   Tryptophan metabolism psk00400   Phenylalanine, tyrosine and tryptophan biosynthesis psk00401   Novobiocin biosynthesis psk00410   beta-Alanine metabolism psk00430   Taurine and hypotaurine metabolism psk00440   Phosphonate and phosphinate metabolism psk00450   Selenocompound metabolism psk00460   Cyanoamino acid metabolism psk00470   D-Amino acid metabolism psk00480   Glutathione metabolism psk00500   Starch and sucrose metabolism psk00520   Amino sugar and nucleotide sugar metabolism psk00521   Streptomycin biosynthesis psk00523   Polyketide sugar unit biosynthesis psk00525   Acarbose and validamycin biosynthesis psk00540   Lipopolysaccharide biosynthesis psk00541   O-Antigen nucleotide sugar biosynthesis psk00543   Exopolysaccharide biosynthesis psk00550   Peptidoglycan biosynthesis psk00552   Teichoic acid biosynthesis psk00561   Glycerolipid metabolism psk00562   Inositol phosphate metabolism psk00564   Glycerophospholipid metabolism psk00565   Ether lipid metabolism psk00592   alpha-Linolenic acid metabolism psk00620   Pyruvate metabolism psk00621   Dioxin degradation psk00622   Xylene degradation psk00623   Toluene degradation psk00624   Polycyclic aromatic hydrocarbon degradation psk00625   Chloroalkane and chloroalkene degradation psk00626   Naphthalene degradation psk00627   Aminobenzoate degradation psk00630   Glyoxylate and dicarboxylate metabolism psk00633   Nitrotoluene degradation psk00640   Propanoate metabolism psk00643   Styrene degradation psk00650   Butanoate metabolism psk00660   C5-Branched dibasic acid metabolism psk00670   One carbon pool by folate psk00680   Methane metabolism psk00710   Carbon fixation by Calvin cycle psk00720   Other carbon fixation pathways psk00730   Thiamine metabolism psk00740   Riboflavin metabolism psk00750   Vitamin B6 metabolism psk00760   Nicotinate and nicotinamide metabolism psk00770   Pantothenate and CoA biosynthesis psk00780   Biotin metabolism psk00785   Lipoic acid metabolism psk00790   Folate biosynthesis psk00791   Atrazine degradation psk00860   Porphyrin metabolism psk00900   Terpenoid backbone biosynthesis psk00907   Pinene, camphor and geraniol degradation psk00910   Nitrogen metabolism psk00920   Sulfur metabolism psk00930   Caprolactam degradation psk00946   Degradation of flavonoids psk00996   Biosynthesis of various alkaloids psk00999   Biosynthesis of various plant secondary metabolites psk01040   Biosynthesis of unsaturated fatty acids psk01053   Biosynthesis of siderophore group nonribosomal peptides KO pathway ko01100     LinkDB All DBs

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