PATHWAY: pstg01100 Help Entry pstg01100                   Pathway                                 Name Metabolic pathways - Phreatobacter stygius Class BRITE hierarchy Pathway map pstg01100   Metabolic pathways Module pstg_M00002   Glycolysis, core module involving three-carbon compounds [PATH:pstg01100] pstg_M00003   Gluconeogenesis, oxaloacetate => fructose-6P [PATH:pstg01100] pstg_M00005   PRPP biosynthesis, ribose 5P => PRPP [PATH:pstg01100] pstg_M00007   Pentose phosphate pathway, non-oxidative phase, fructose 6P => ribose 5P [PATH:pstg01100] pstg_M00009   Citrate cycle (TCA cycle, Krebs cycle) [PATH:pstg01100] pstg_M00010   Citrate cycle, first carbon oxidation, oxaloacetate => 2-oxoglutarate [PATH:pstg01100] pstg_M00011   Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate [PATH:pstg01100] pstg_M00015   Proline biosynthesis, glutamate => proline [PATH:pstg01100] pstg_M00016   Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine [PATH:pstg01100] pstg_M00018   Threonine biosynthesis, aspartate => homoserine => threonine [PATH:pstg01100] pstg_M00019   Valine/isoleucine biosynthesis, pyruvate => valine / 2-oxobutanoate => isoleucine [PATH:pstg01100] pstg_M00020   Serine biosynthesis, glycerate-3P => serine [PATH:pstg01100] pstg_M00021   Cysteine biosynthesis, serine => cysteine [PATH:pstg01100] pstg_M00022   Shikimate pathway, phosphoenolpyruvate + erythrose-4P => chorismate [PATH:pstg01100] pstg_M00023   Tryptophan biosynthesis, chorismate => tryptophan [PATH:pstg01100] pstg_M00026   Histidine biosynthesis, PRPP => histidine [PATH:pstg01100] pstg_M00027   GABA (gamma-Aminobutyrate) shunt [PATH:pstg01100] pstg_M00028   Ornithine biosynthesis, glutamate => ornithine [PATH:pstg01100] pstg_M00045   Histidine degradation, histidine => N-formiminoglutamate => glutamate [PATH:pstg01100] pstg_M00048   De novo purine biosynthesis, PRPP + glutamine => IMP [PATH:pstg01100] pstg_M00049   Adenine ribonucleotide biosynthesis, IMP => ADP,ATP [PATH:pstg01100] pstg_M00050   Guanine ribonucleotide biosynthesis, IMP => GDP,GTP [PATH:pstg01100] pstg_M00052   Pyrimidine ribonucleotide biosynthesis, UMP => UDP/UTP,CDP/CTP [PATH:pstg01100] pstg_M00053   Deoxyribonucleotide biosynthesis, ADP/GDP/CDP/UDP => dATP/dGTP/dCTP/dUTP [PATH:pstg01100] pstg_M00061   D-Glucuronate degradation, D-glucuronate => pyruvate + D-glyceraldehyde 3P [PATH:pstg01100] pstg_M00082   Fatty acid biosynthesis, initiation [PATH:pstg01100] pstg_M00083   Fatty acid biosynthesis, elongation [PATH:pstg01100] pstg_M00086   beta-Oxidation, acyl-CoA synthesis [PATH:pstg01100] pstg_M00091   Phosphatidylcholine (PC) biosynthesis, PE => PC [PATH:pstg01100] pstg_M00093   Phosphatidylethanolamine (PE) biosynthesis, PA => PS => PE [PATH:pstg01100] pstg_M00115   NAD biosynthesis, aspartate => quinolinate => NAD [PATH:pstg01100] pstg_M00118   Glutathione biosynthesis, glutamate => glutathione [PATH:pstg01100] pstg_M00120   Coenzyme A biosynthesis, pantothenate => CoA [PATH:pstg01100] pstg_M00134   Polyamine biosynthesis, arginine => ornithine => putrescine [PATH:pstg01100] pstg_M00140   C1-unit interconversion, prokaryotes [PATH:pstg01100] pstg_M00144   NADH:quinone oxidoreductase, prokaryotes [PATH:pstg01100] pstg_M00149   Succinate dehydrogenase, prokaryotes [PATH:pstg01100] pstg_M00151   Cytochrome bc1 complex respiratory unit [PATH:pstg01100] pstg_M00155   Cytochrome c oxidase, prokaryotes [PATH:pstg01100] pstg_M00157   F-type ATPase, prokaryotes and chloroplasts [PATH:pstg01100] pstg_M00168   CAM (Crassulacean acid metabolism), dark [PATH:pstg01100] pstg_M00169   CAM (Crassulacean acid metabolism), light [PATH:pstg01100] pstg_M00176   Assimilatory sulfate reduction, sulfate => H2S [PATH:pstg01100] pstg_M00307   Pyruvate oxidation, pyruvate => acetyl-CoA [PATH:pstg01100] pstg_M00432   Leucine biosynthesis, 2-oxoisovalerate => 2-oxoisocaproate [PATH:pstg01100] pstg_M00531   Assimilatory nitrate reduction, nitrate => ammonia [PATH:pstg01100] pstg_M00549   Nucleotide sugar biosynthesis, glucose => UDP-glucose [PATH:pstg01100] pstg_M00570   Isoleucine biosynthesis, threonine => 2-oxobutanoate => isoleucine [PATH:pstg01100] pstg_M00595   Thiosulfate oxidation by SOX complex, thiosulfate => sulfate [PATH:pstg01100] pstg_M00621   Glycine cleavage system [PATH:pstg01100] pstg_M00741   Propanoyl-CoA metabolism, propanoyl-CoA => succinyl-CoA [PATH:pstg01100] pstg_M00793   dTDP-L-rhamnose biosynthesis [PATH:pstg01100] pstg_M00844   Arginine biosynthesis, ornithine => arginine [PATH:pstg01100] pstg_M00880   Molybdenum cofactor biosynthesis, GTP => molybdenum cofactor [PATH:pstg01100] pstg_M00881   Lipoic acid biosynthesis, plants and bacteria, octanoyl-ACP => dihydrolipoyl-E2/H [PATH:pstg01100] pstg_M00899   Thiamine salvage pathway, HMP/HET => TMP [PATH:pstg01100] pstg_M00909   UDP-N-acetyl-D-glucosamine biosynthesis, prokaryotes, glucose => UDP-GlcNAc [PATH:pstg01100] pstg_M00925   Cobalamin biosynthesis, aerobic, uroporphyrinogen III => precorrin 2 => cobyrinate a,c-diamide [PATH:pstg01100] pstg_M00938   Pyrimidine deoxyribonucleotide biosynthesis, UDP => dTTP [PATH:pstg01100] pstg_M00958   Adenine ribonucleotide degradation, AMP => Urate [PATH:pstg01100] pstg_M00959   Guanine ribonucleotide degradation, GMP => Urate [PATH:pstg01100] pstg_M00970   Proline degradation, proline => glutamate [PATH:pstg01100] Organism Phreatobacter stygius [GN:pstg] Related pathway pstg00010   Glycolysis / Gluconeogenesis pstg00020   Citrate cycle (TCA cycle) pstg00030   Pentose phosphate pathway pstg00040   Pentose and glucuronate interconversions pstg00051   Fructose and mannose metabolism pstg00052   Galactose metabolism pstg00053   Ascorbate and aldarate metabolism pstg00061   Fatty acid biosynthesis pstg00071   Fatty acid degradation pstg00130   Ubiquinone and other terpenoid-quinone biosynthesis pstg00190   Oxidative phosphorylation pstg00220   Arginine biosynthesis pstg00230   Purine metabolism pstg00240   Pyrimidine metabolism pstg00250   Alanine, aspartate and glutamate metabolism pstg00260   Glycine, serine and threonine metabolism pstg00261   Monobactam biosynthesis pstg00270   Cysteine and methionine metabolism pstg00280   Valine, leucine and isoleucine degradation pstg00290   Valine, leucine and isoleucine biosynthesis pstg00300   Lysine biosynthesis pstg00310   Lysine degradation pstg00311   Penicillin and cephalosporin biosynthesis pstg00330   Arginine and proline metabolism pstg00332   Carbapenem biosynthesis pstg00340   Histidine metabolism pstg00350   Tyrosine metabolism pstg00360   Phenylalanine metabolism pstg00361   Chlorocyclohexane and chlorobenzene degradation pstg00362   Benzoate degradation pstg00364   Fluorobenzoate degradation pstg00365   Furfural degradation pstg00380   Tryptophan metabolism pstg00400   Phenylalanine, tyrosine and tryptophan biosynthesis pstg00401   Novobiocin biosynthesis pstg00405   Phenazine biosynthesis pstg00410   beta-Alanine metabolism pstg00430   Taurine and hypotaurine metabolism pstg00440   Phosphonate and phosphinate metabolism pstg00450   Selenocompound metabolism pstg00460   Cyanoamino acid metabolism pstg00470   D-Amino acid metabolism pstg00480   Glutathione metabolism pstg00500   Starch and sucrose metabolism pstg00520   Amino sugar and nucleotide sugar metabolism pstg00521   Streptomycin biosynthesis pstg00523   Polyketide sugar unit biosynthesis pstg00525   Acarbose and validamycin biosynthesis pstg00540   Lipopolysaccharide biosynthesis pstg00541   O-Antigen nucleotide sugar biosynthesis pstg00543   Exopolysaccharide biosynthesis pstg00550   Peptidoglycan biosynthesis pstg00552   Teichoic acid biosynthesis pstg00561   Glycerolipid metabolism pstg00562   Inositol phosphate metabolism pstg00564   Glycerophospholipid metabolism pstg00600   Sphingolipid metabolism pstg00620   Pyruvate metabolism pstg00622   Xylene degradation pstg00623   Toluene degradation pstg00625   Chloroalkane and chloroalkene degradation pstg00626   Naphthalene degradation pstg00627   Aminobenzoate degradation pstg00630   Glyoxylate and dicarboxylate metabolism pstg00633   Nitrotoluene degradation pstg00640   Propanoate metabolism pstg00643   Styrene degradation pstg00650   Butanoate metabolism pstg00660   C5-Branched dibasic acid metabolism pstg00670   One carbon pool by folate pstg00680   Methane metabolism pstg00710   Carbon fixation by Calvin cycle pstg00720   Other carbon fixation pathways pstg00730   Thiamine metabolism pstg00740   Riboflavin metabolism pstg00750   Vitamin B6 metabolism pstg00760   Nicotinate and nicotinamide metabolism pstg00770   Pantothenate and CoA biosynthesis pstg00780   Biotin metabolism pstg00785   Lipoic acid metabolism pstg00790   Folate biosynthesis pstg00791   Atrazine degradation pstg00860   Porphyrin metabolism pstg00900   Terpenoid backbone biosynthesis pstg00906   Carotenoid biosynthesis pstg00907   Pinene, camphor and geraniol degradation pstg00910   Nitrogen metabolism pstg00920   Sulfur metabolism pstg00930   Caprolactam degradation pstg00946   Degradation of flavonoids pstg00996   Biosynthesis of various alkaloids pstg00999   Biosynthesis of various plant secondary metabolites pstg01040   Biosynthesis of unsaturated fatty acids pstg01053   Biosynthesis of siderophore group nonribosomal peptides KO pathway ko01100     LinkDB All DBs

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