KEGG   PATHWAY: rap01100
Entry
rap01100                    Pathway                                
Name
Metabolic pathways - Rhodovastum atsumiense
Class
Pathway map
rap01100  Metabolic pathways
rap01100

Module
rap_M00001  Glycolysis (Embden-Meyerhof pathway), glucose => pyruvate [PATH:rap01100]
rap_M00002  Glycolysis, core module involving three-carbon compounds [PATH:rap01100]
rap_M00003  Gluconeogenesis, oxaloacetate => fructose-6P [PATH:rap01100]
rap_M00004  Pentose phosphate pathway (Pentose phosphate cycle) [PATH:rap01100]
rap_M00005  PRPP biosynthesis, ribose 5P => PRPP [PATH:rap01100]
rap_M00006  Pentose phosphate pathway, oxidative phase, glucose 6P => ribulose 5P [PATH:rap01100]
rap_M00007  Pentose phosphate pathway, non-oxidative phase, fructose 6P => ribose 5P [PATH:rap01100]
rap_M00008  Entner-Doudoroff pathway, glucose-6P => glyceraldehyde-3P + pyruvate [PATH:rap01100]
rap_M00009  Citrate cycle (TCA cycle, Krebs cycle) [PATH:rap01100]
rap_M00010  Citrate cycle, first carbon oxidation, oxaloacetate => 2-oxoglutarate [PATH:rap01100]
rap_M00011  Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate [PATH:rap01100]
rap_M00012  Glyoxylate cycle [PATH:rap01100]
rap_M00015  Proline biosynthesis, glutamate => proline [PATH:rap01100]
rap_M00016  Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine [PATH:rap01100]
rap_M00017  Methionine biosynthesis, aspartate => homoserine => methionine [PATH:rap01100]
rap_M00018  Threonine biosynthesis, aspartate => homoserine => threonine [PATH:rap01100]
rap_M00019  Valine/isoleucine biosynthesis, pyruvate => valine / 2-oxobutanoate => isoleucine [PATH:rap01100]
rap_M00020  Serine biosynthesis, glycerate-3P => serine [PATH:rap01100]
rap_M00021  Cysteine biosynthesis, serine => cysteine [PATH:rap01100]
rap_M00023  Tryptophan biosynthesis, chorismate => tryptophan [PATH:rap01100]
rap_M00026  Histidine biosynthesis, PRPP => histidine [PATH:rap01100]
rap_M00028  Ornithine biosynthesis, glutamate => ornithine [PATH:rap01100]
rap_M00048  De novo purine biosynthesis, PRPP + glutamine => IMP [PATH:rap01100]
rap_M00049  Adenine ribonucleotide biosynthesis, IMP => ADP,ATP [PATH:rap01100]
rap_M00050  Guanine ribonucleotide biosynthesis, IMP => GDP,GTP [PATH:rap01100]
rap_M00052  Pyrimidine ribonucleotide biosynthesis, UMP => UDP/UTP,CDP/CTP [PATH:rap01100]
rap_M00053  Deoxyribonucleotide biosynthesis, ADP/GDP/CDP/UDP => dATP/dGTP/dCTP/dUTP [PATH:rap01100]
rap_M00061  D-Glucuronate degradation, D-glucuronate => pyruvate + D-glyceraldehyde 3P [PATH:rap01100]
rap_M00082  Fatty acid biosynthesis, initiation [PATH:rap01100]
rap_M00083  Fatty acid biosynthesis, elongation [PATH:rap01100]
rap_M00086  beta-Oxidation, acyl-CoA synthesis [PATH:rap01100]
rap_M00087  beta-Oxidation [PATH:rap01100]
rap_M00091  Phosphatidylcholine (PC) biosynthesis, PE => PC [PATH:rap01100]
rap_M00093  Phosphatidylethanolamine (PE) biosynthesis, PA => PS => PE [PATH:rap01100]
rap_M00115  NAD biosynthesis, aspartate => quinolinate => NAD [PATH:rap01100]
rap_M00118  Glutathione biosynthesis, glutamate => glutathione [PATH:rap01100]
rap_M00119  Pantothenate biosynthesis, valine/L-aspartate => pantothenate [PATH:rap01100]
rap_M00120  Coenzyme A biosynthesis, pantothenate => CoA [PATH:rap01100]
rap_M00122  Cobalamin biosynthesis, cobyrinate a,c-diamide => cobalamin [PATH:rap01100]
rap_M00140  C1-unit interconversion, prokaryotes [PATH:rap01100]
rap_M00144  NADH:quinone oxidoreductase, prokaryotes [PATH:rap01100]
rap_M00149  Succinate dehydrogenase, prokaryotes [PATH:rap01100]
rap_M00151  Cytochrome bc1 complex respiratory unit [PATH:rap01100]
rap_M00155  Cytochrome c oxidase, prokaryotes [PATH:rap01100]
rap_M00156  Cytochrome c oxidase, cbb3-type [PATH:rap01100]
rap_M00168  CAM (Crassulacean acid metabolism), dark [PATH:rap01100]
rap_M00169  CAM (Crassulacean acid metabolism), light [PATH:rap01100]
rap_M00175  Nitrogen fixation, nitrogen => ammonia [PATH:rap01100]
rap_M00176  Assimilatory sulfate reduction, sulfate => H2S [PATH:rap01100]
rap_M00307  Pyruvate oxidation, pyruvate => acetyl-CoA [PATH:rap01100]
rap_M00432  Leucine biosynthesis, 2-oxoisovalerate => 2-oxoisocaproate [PATH:rap01100]
rap_M00531  Assimilatory nitrate reduction, nitrate => ammonia [PATH:rap01100]
rap_M00549  Nucleotide sugar biosynthesis, glucose => UDP-glucose [PATH:rap01100]
rap_M00552  D-galactonate degradation, De Ley-Doudoroff pathway, D-galactonate => glycerate-3P [PATH:rap01100]
rap_M00565  Trehalose biosynthesis, D-glucose 1P => trehalose [PATH:rap01100]
rap_M00570  Isoleucine biosynthesis, threonine => 2-oxobutanoate => isoleucine [PATH:rap01100]
rap_M00579  Phosphate acetyltransferase-acetate kinase pathway, acetyl-CoA => acetate [PATH:rap01100]
rap_M00621  Glycine cleavage system [PATH:rap01100]
rap_M00631  D-Galacturonate degradation (bacteria), D-galacturonate => pyruvate + D-glyceraldehyde 3P [PATH:rap01100]
rap_M00793  dTDP-L-rhamnose biosynthesis [PATH:rap01100]
rap_M00844  Arginine biosynthesis, ornithine => arginine [PATH:rap01100]
rap_M00854  Glycogen biosynthesis, glucose-1P => glycogen/starch [PATH:rap01100]
rap_M00880  Molybdenum cofactor biosynthesis, GTP => molybdenum cofactor [PATH:rap01100]
rap_M00881  Lipoic acid biosynthesis, plants and bacteria, octanoyl-ACP => dihydrolipoyl-E2/H [PATH:rap01100]
rap_M00909  UDP-N-acetyl-D-glucosamine biosynthesis, prokaryotes, glucose => UDP-GlcNAc [PATH:rap01100]
rap_M00938  Pyrimidine deoxyribonucleotide biosynthesis, UDP => dTTP [PATH:rap01100]
rap_M00958  Adenine ribonucleotide degradation, AMP => Urate [PATH:rap01100]
rap_M00970  Proline degradation, proline => glutamate [PATH:rap01100]
Organism
Rhodovastum atsumiense [GN:rap]
Related
pathway
rap00010  Glycolysis / Gluconeogenesis
rap00020  Citrate cycle (TCA cycle)
rap00030  Pentose phosphate pathway
rap00040  Pentose and glucuronate interconversions
rap00051  Fructose and mannose metabolism
rap00052  Galactose metabolism
rap00053  Ascorbate and aldarate metabolism
rap00061  Fatty acid biosynthesis
rap00071  Fatty acid degradation
rap00130  Ubiquinone and other terpenoid-quinone biosynthesis
rap00190  Oxidative phosphorylation
rap00220  Arginine biosynthesis
rap00230  Purine metabolism
rap00240  Pyrimidine metabolism
rap00250  Alanine, aspartate and glutamate metabolism
rap00260  Glycine, serine and threonine metabolism
rap00261  Monobactam biosynthesis
rap00270  Cysteine and methionine metabolism
rap00280  Valine, leucine and isoleucine degradation
rap00290  Valine, leucine and isoleucine biosynthesis
rap00300  Lysine biosynthesis
rap00310  Lysine degradation
rap00311  Penicillin and cephalosporin biosynthesis
rap00330  Arginine and proline metabolism
rap00332  Carbapenem biosynthesis
rap00340  Histidine metabolism
rap00350  Tyrosine metabolism
rap00360  Phenylalanine metabolism
rap00361  Chlorocyclohexane and chlorobenzene degradation
rap00362  Benzoate degradation
rap00364  Fluorobenzoate degradation
rap00380  Tryptophan metabolism
rap00400  Phenylalanine, tyrosine and tryptophan biosynthesis
rap00401  Novobiocin biosynthesis
rap00405  Phenazine biosynthesis
rap00410  beta-Alanine metabolism
rap00430  Taurine and hypotaurine metabolism
rap00440  Phosphonate and phosphinate metabolism
rap00450  Selenocompound metabolism
rap00460  Cyanoamino acid metabolism
rap00470  D-Amino acid metabolism
rap00480  Glutathione metabolism
rap00500  Starch and sucrose metabolism
rap00520  Amino sugar and nucleotide sugar metabolism
rap00521  Streptomycin biosynthesis
rap00523  Polyketide sugar unit biosynthesis
rap00525  Acarbose and validamycin biosynthesis
rap00540  Lipopolysaccharide biosynthesis
rap00541  O-Antigen nucleotide sugar biosynthesis
rap00543  Exopolysaccharide biosynthesis
rap00550  Peptidoglycan biosynthesis
rap00552  Teichoic acid biosynthesis
rap00561  Glycerolipid metabolism
rap00562  Inositol phosphate metabolism
rap00564  Glycerophospholipid metabolism
rap00565  Ether lipid metabolism
rap00592  alpha-Linolenic acid metabolism
rap00620  Pyruvate metabolism
rap00621  Dioxin degradation
rap00622  Xylene degradation
rap00623  Toluene degradation
rap00625  Chloroalkane and chloroalkene degradation
rap00626  Naphthalene degradation
rap00627  Aminobenzoate degradation
rap00630  Glyoxylate and dicarboxylate metabolism
rap00640  Propanoate metabolism
rap00643  Styrene degradation
rap00650  Butanoate metabolism
rap00660  C5-Branched dibasic acid metabolism
rap00670  One carbon pool by folate
rap00680  Methane metabolism
rap00730  Thiamine metabolism
rap00740  Riboflavin metabolism
rap00750  Vitamin B6 metabolism
rap00760  Nicotinate and nicotinamide metabolism
rap00770  Pantothenate and CoA biosynthesis
rap00780  Biotin metabolism
rap00785  Lipoic acid metabolism
rap00790  Folate biosynthesis
rap00860  Porphyrin metabolism
rap00900  Terpenoid backbone biosynthesis
rap00906  Carotenoid biosynthesis
rap00907  Pinene, camphor and geraniol degradation
rap00909  Sesquiterpenoid and triterpenoid biosynthesis
rap00910  Nitrogen metabolism
rap00920  Sulfur metabolism
rap00930  Caprolactam degradation
rap00996  Biosynthesis of various alkaloids
rap00999  Biosynthesis of various plant secondary metabolites
rap01040  Biosynthesis of unsaturated fatty acids
KO pathway
ko01100   
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