KEGG   PATHWAY: rcon00230
Entry
rcon00230                   Pathway                                
Name
Purine metabolism - Ruegeria conchae
Class
Metabolism; Nucleotide metabolism
Pathway map
rcon00230  Purine metabolism
rcon00230

Module
rcon_M00005  PRPP biosynthesis, ribose 5P => PRPP [PATH:rcon00230]
rcon_M00048  De novo purine biosynthesis, PRPP + glutamine => IMP [PATH:rcon00230]
rcon_M00049  Adenine ribonucleotide biosynthesis, IMP => ADP,ATP [PATH:rcon00230]
rcon_M00050  Guanine ribonucleotide biosynthesis, IMP => GDP,GTP [PATH:rcon00230]
rcon_M00958  Adenine ribonucleotide degradation, AMP => Urate [PATH:rcon00230]
rcon_M00959  Guanine ribonucleotide degradation, GMP => Urate [PATH:rcon00230]
Other DBs
GO: 0006163 0042278
Organism
Ruegeria conchae [GN:rcon]
Gene
K3740_05535  phosphopentomutase [KO:K01839] [EC:5.4.2.7]
K3740_13175  phosphomannomutase/phosphoglucomutase [KO:K15778] [EC:5.4.2.8 5.4.2.2]
K3740_13510  ribose-phosphate pyrophosphokinase [KO:K00948] [EC:2.7.6.1]
K3740_09645  purF; amidophosphoribosyltransferase [KO:K00764] [EC:2.4.2.14]
K3740_06410  purD; phosphoribosylamine--glycine ligase [KO:K01945] [EC:6.3.4.13]
K3740_09250  purN; phosphoribosylglycinamide formyltransferase [KO:K11175] [EC:2.1.2.2]
K3740_07860  purL; phosphoribosylformylglycinamidine synthase subunit PurL [KO:K23269] [EC:6.3.5.3]
K3740_07940  purS; phosphoribosylformylglycinamidine synthase subunit PurS [KO:K23264] [EC:6.3.5.3]
K3740_07945  purQ; phosphoribosylformylglycinamidine synthase subunit PurQ [KO:K23265] [EC:6.3.5.3 3.5.1.2]
K3740_09255  purM; phosphoribosylformylglycinamidine cyclo-ligase [KO:K01933] [EC:6.3.3.1]
K3740_13430  5-(carboxyamino)imidazole ribonucleotide synthase [KO:K01589] [EC:6.3.4.18]
K3740_13420  purE; 5-(carboxyamino)imidazole ribonucleotide mutase [KO:K01588] [EC:5.4.99.18]
K3740_07935  phosphoribosylaminoimidazolesuccinocarboxamide synthase [KO:K01923] [EC:6.3.2.6]
K3740_10685  purB; adenylosuccinate lyase [KO:K01756] [EC:4.3.2.2]
K3740_16465  purH; bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase [KO:K00602] [EC:2.1.2.3 3.5.4.10]
K3740_13950  adenine phosphoribosyltransferase [KO:K00759] [EC:2.4.2.7]
K3740_05640  5'-nucleotidase/apyrase family protein [KO:K11751] [EC:3.1.3.5 3.6.1.45]
K3740_09700  surE; 5'/3'-nucleotidase SurE [KO:K03787] [EC:3.1.3.5 3.1.3.6]
K3740_01525  deoD; purine-nucleoside phosphorylase [KO:K03784] [EC:2.4.2.1]
K3740_13360  pgeF; peptidoglycan editing factor PgeF [KO:K05810] [EC:2.4.2.1 2.4.2.28 3.5.4.4]
K3740_07505  hpt; hypoxanthine phosphoribosyltransferase [KO:K00760] [EC:2.4.2.8]
K3740_08880  guaB; IMP dehydrogenase [KO:K00088] [EC:1.1.1.205]
K3740_07215  ndk; nucleoside-diphosphate kinase [KO:K00940] [EC:2.7.4.6]
K3740_18265  rdgB; RdgB/HAM1 family non-canonical purine NTP pyrophosphatase [KO:K01519] [EC:3.6.1.66]
K3740_09145  gpt; xanthine phosphoribosyltransferase [KO:K00769] [EC:2.4.2.22]
K3740_15235  xanthine dehydrogenase family protein subunit M [KO:K13479] [EC:1.17.1.4]
K3740_12560  xdhA; xanthine dehydrogenase small subunit [KO:K13481] [EC:1.17.1.4]
K3740_12565  xdhB; xanthine dehydrogenase molybdopterin binding subunit [KO:K13482] [EC:1.17.1.4]
K3740_07460  guaA; glutamine-hydrolyzing GMP synthase [KO:K01951] [EC:6.3.5.2]
K3740_11395  glutamine amidotransferase [KO:K01951] [EC:6.3.5.2]
K3740_11440  guaD; guanine deaminase [KO:K01487] [EC:3.5.4.3]
K3740_08560  gmk; guanylate kinase [KO:K00942] [EC:2.7.4.8]
K3740_09110  vitamin B12-dependent ribonucleotide reductase [KO:K00525] [EC:1.17.4.1]
K3740_12515  adenosylcobalamin-dependent ribonucleoside-diphosphate reductase [KO:K00525] [EC:1.17.4.1]
K3740_10105  deoxyguanosinetriphosphate triphosphohydrolase [KO:K01129] [EC:3.1.5.1]
K3740_18040  HD family hydrolase [KO:K06952] [EC:3.1.3.89]
K3740_04030  bifunctional (p)ppGpp synthetase/guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase [KO:K01139] [EC:2.7.6.5 3.1.7.2]
K3740_08915  Ppx/GppA family phosphatase [KO:K01524] [EC:3.6.1.11 3.6.1.40]
K3740_11260  Ppx/GppA family phosphatase [KO:K01524] [EC:3.6.1.11 3.6.1.40]
K3740_01925  adenylate/guanylate cyclase domain-containing protein [KO:K01768] [EC:4.6.1.1]
K3740_15990  adenylate/guanylate cyclase domain-containing protein [KO:K01768] [EC:4.6.1.1]
K3740_16020  DUF427 domain-containing protein [KO:K01768] [EC:4.6.1.1]
K3740_17300  adenylate/guanylate cyclase domain-containing protein [KO:K01768] [EC:4.6.1.1]
K3740_19940  adenylate/guanylate cyclase domain-containing protein [KO:K01768] [EC:4.6.1.1]
K3740_20655  tetratricopeptide repeat protein [KO:K01768] [EC:4.6.1.1]
K3740_06290  adenylosuccinate synthase [KO:K01939] [EC:6.3.4.4]
K3740_05540  adenosine deaminase [KO:K01488] [EC:3.5.4.4]
K3740_18675  AMP nucleosidase [KO:K01241] [EC:3.2.2.4]
K3740_18680  ade; adenine deaminase [KO:K01486] [EC:3.5.4.2]
K3740_15560  bifunctional 2',3'-cyclic-nucleotide 2'-phosphodiesterase/3'-nucleotidase [KO:K01119] [EC:3.1.4.16 3.1.3.6]
K3740_19430  bifunctional 2',3'-cyclic-nucleotide 2'-phosphodiesterase/3'-nucleotidase [KO:K01119] [EC:3.1.4.16 3.1.3.6]
K3740_11420  TIGR00282 family metallophosphoesterase [KO:K09769] [EC:3.1.4.16]
K3740_07070  adenylate kinase [KO:K00939] [EC:2.7.4.3]
K3740_02545  adenylate kinase [KO:K00939] [EC:2.7.4.3]
K3740_09870  mazG; nucleoside triphosphate pyrophosphohydrolase [KO:K04765] [EC:3.6.1.9]
K3740_13390  bifunctional sulfate adenylyltransferase/adenylylsulfate kinase [KO:K00958] [EC:2.7.7.4]
K3740_14365  uraH; hydroxyisourate hydrolase [KO:K07127] [EC:3.5.2.17]
K3740_14360  puuE; allantoinase PuuE [KO:K16842] [EC:3.5.2.5]
K3740_14335  (S)-ureidoglycine aminohydrolase [KO:K14977] [EC:3.5.3.26]
K3740_14355  ureidoglycolate lyase [KO:K01483] [EC:4.3.2.3]
K3740_03245  ureC; urease subunit alpha [KO:K01428] [EC:3.5.1.5]
K3740_03250  urease subunit beta [KO:K01429] [EC:3.5.1.5]
K3740_03260  urease subunit gamma [KO:K01430] [EC:3.5.1.5]
Compound
C00002  ATP
C00008  ADP
C00011  CO2
C00014  Ammonia
C00020  AMP
C00035  GDP
C00037  Glycine
C00039  DNA
C00044  GTP
C00046  RNA
C00048  Glyoxylate
C00053  3'-Phosphoadenylyl sulfate
C00054  Adenosine 3',5'-bisphosphate
C00059  Sulfate
C00064  L-Glutamine
C00081  ITP
C00086  Urea
C00104  IDP
C00117  D-Ribose 5-phosphate
C00119  5-Phospho-alpha-D-ribose 1-diphosphate
C00130  IMP
C00131  dATP
C00144  GMP
C00147  Adenine
C00169  Carbamoyl phosphate
C00206  dADP
C00209  Oxalate
C00212  Adenosine
C00224  Adenylyl sulfate
C00242  Guanine
C00262  Hypoxanthine
C00286  dGTP
C00288  HCO3-
C00294  Inosine
C00301  ADP-ribose
C00330  Deoxyguanosine
C00360  dAMP
C00361  dGDP
C00362  dGMP
C00366  Urate
C00385  Xanthine
C00387  Guanosine
C00499  Allantoate
C00559  Deoxyadenosine
C00575  3',5'-Cyclic AMP
C00603  (S)-Ureidoglycolate
C00620  alpha-D-Ribose 1-phosphate
C00655  Xanthosine 5'-phosphate
C00700  XTP
C00802  Oxalureate
C00942  3',5'-Cyclic GMP
C01228  Guanosine 3',5'-bis(diphosphate)
C01260  P1,P4-Bis(5'-adenosyl)tetraphosphate
C01261  P1,P4-Bis(5'-guanosyl) tetraphosphate
C01344  dIDP
C01345  dITP
C01367  3'-AMP
C01444  Oxamate
C01762  Xanthosine
C02091  (S)-Ureidoglycine
C02348  (R)(-)-Allantoin
C02350  (S)-Allantoin
C02353  2',3'-Cyclic AMP
C02718  N-Formiminoglycine
C03090  5-Phosphoribosylamine
C03373  Aminoimidazole ribotide
C03483  Adenosine tetraphosphate
C03614  Inosine 5'-tetraphosphate
C03794  N6-(1,2-Dicarboxyethyl)-AMP
C03838  5'-Phosphoribosylglycinamide
C04051  5-Amino-4-imidazolecarboxyamide
C04376  5'-Phosphoribosyl-N-formylglycinamide
C04392  P1,P4-Bis(5'-xanthosyl) tetraphosphate
C04494  Guanosine 3'-diphosphate 5'-triphosphate
C04640  2-(Formamido)-N1-(5'-phosphoribosyl)acetamidine
C04677  1-(5'-Phosphoribosyl)-5-amino-4-imidazolecarboxamide
C04734  1-(5'-Phosphoribosyl)-5-formamido-4-imidazolecarboxamide
C04751  1-(5-Phospho-D-ribosyl)-5-amino-4-imidazolecarboxylate
C04823  1-(5'-Phosphoribosyl)-5-amino-4-(N-succinocarboxamide)-imidazole
C05239  5-Aminoimidazole
C05512  Deoxyinosine
C05513  Urate-3-ribonucleoside
C05515  5-Ureido-4-imidazole carboxylate
C05516  5-Amino-4-imidazole carboxylate
C05993  Acetyl adenylate
C06193  Guanosine 3'-phosphate
C06194  2',3'-Cyclic GMP
C06195  Imidazolone
C06196  2'-Deoxyinosine 5'-phosphate
C06197  P1,P3-Bis(5'-adenosyl) triphosphate
C06433  5'-Benzoylphosphoadenosine
C06435  5'-Butyrylphosphoinosine
C11821  5-Hydroxyisourate
C12248  5-Hydroxy-2-oxo-4-ureido-2,5-dihydro-1H-imidazole-5-carboxylate
C15667  5-Carboxyamino-1-(5-phospho-D-ribosyl)imidazole
C22395  N6-Succino-2-amino-2'-deoxyadenylate
C22441  dZMP
C22442  dZDP
C22443  dZTP
C22499  8-Hydroxyadenine
C22500  2,8-Dihydroxyadenine
Reference
PMID:10601204
  Authors
Cusa E, Obradors N, Baldoma L, Badia J, Aguilar J.
  Title
Genetic analysis of a chromosomal region containing genes required for assimilation of allantoin nitrogen and linked glyoxylate metabolism in Escherichia coli.
  Journal
J Bacteriol 181:7479-84 (1999)
DOI:10.1128/JB.181.24.7479-7484.1999
Reference
PMID:10986234
  Authors
Xi H, Schneider BL, Reitzer L.
  Title
Purine catabolism in Escherichia coli and function of xanthine dehydrogenase in purine salvage.
  Journal
J Bacteriol 182:5332-41 (2000)
DOI:10.1128/JB.182.19.5332-5341.2000
Related
pathway
rcon00030  Pentose phosphate pathway
rcon00220  Arginine biosynthesis
rcon00250  Alanine, aspartate and glutamate metabolism
rcon00260  Glycine, serine and threonine metabolism
rcon00340  Histidine metabolism
rcon00630  Glyoxylate and dicarboxylate metabolism
rcon00730  Thiamine metabolism
rcon00740  Riboflavin metabolism
rcon00790  Folate biosynthesis
KO pathway
ko00230   
LinkDB

DBGET integrated database retrieval system