PATHWAY: rhy01100 Help Entry rhy01100          Global    Pathway                                 Name Metabolic pathways - Rhodoferax koreensis Class BRITE hierarchy Pathway map rhy01100   Metabolic pathways Module rhy_M00001   Glycolysis (Embden-Meyerhof pathway), glucose => pyruvate [PATH:rhy01100] rhy_M00002   Glycolysis, core module involving three-carbon compounds [PATH:rhy01100] rhy_M00003   Gluconeogenesis, oxaloacetate => fructose-6P [PATH:rhy01100] rhy_M00005   PRPP biosynthesis, ribose-5P => PRPP [PATH:rhy01100] rhy_M00007   Pentose phosphate pathway, non-oxidative phase, fructose-6P => ribose-5P [PATH:rhy01100] rhy_M00009   Citrate cycle (TCA cycle, Krebs cycle) [PATH:rhy01100] rhy_M00010   Citrate cycle, first carbon oxidation, oxaloacetate => 2-oxoglutarate [PATH:rhy01100] rhy_M00011   Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate [PATH:rhy01100] rhy_M00012   Glyoxylate cycle [PATH:rhy01100] rhy_M00015   Proline biosynthesis, glutamate => proline [PATH:rhy01100] rhy_M00016   Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine [PATH:rhy01100] rhy_M00018   Threonine biosynthesis, aspartate => homoserine => threonine [PATH:rhy01100] rhy_M00019   Valine/isoleucine biosynthesis, pyruvate => valine / 2-oxobutanoate => isoleucine [PATH:rhy01100] rhy_M00020   Serine biosynthesis, glycerate-3P => serine [PATH:rhy01100] rhy_M00021   Cysteine biosynthesis, serine => cysteine [PATH:rhy01100] rhy_M00022   Shikimate pathway, phosphoenolpyruvate + erythrose-4P => chorismate [PATH:rhy01100] rhy_M00023   Tryptophan biosynthesis, chorismate => tryptophan [PATH:rhy01100] rhy_M00024   Phenylalanine biosynthesis, chorismate => phenylpyruvate => phenylalanine [PATH:rhy01100] rhy_M00025   Tyrosine biosynthesis, chorismate => HPP => tyrosine [PATH:rhy01100] rhy_M00026   Histidine biosynthesis, PRPP => histidine [PATH:rhy01100] rhy_M00028   Ornithine biosynthesis, glutamate => ornithine [PATH:rhy01100] rhy_M00044   Tyrosine degradation, tyrosine => homogentisate [PATH:rhy01100] rhy_M00045   Histidine degradation, histidine => N-formiminoglutamate => glutamate [PATH:rhy01100] rhy_M00049   Adenine ribonucleotide biosynthesis, IMP => ADP,ATP [PATH:rhy01100] rhy_M00050   Guanine ribonucleotide biosynthesis, IMP => GDP,GTP [PATH:rhy01100] rhy_M00052   Pyrimidine ribonucleotide biosynthesis, UMP => UDP/UTP,CDP/CTP [PATH:rhy01100] rhy_M00053   Deoxyribonucleotide biosynthesis, ADP/GDP/CDP/UDP => dATP/dGTP/dCTP/dUTP [PATH:rhy01100] rhy_M00063   CMP-KDO biosynthesis, ribulose-5P => CMP-KDO [PATH:rhy01100] rhy_M00064   ADP-LDmanHep biosynthesis, sedoheptulose-7P => ADP-LDmanHep [PATH:rhy01100] rhy_M00082   Fatty acid biosynthesis, initiation [PATH:rhy01100] rhy_M00083   Fatty acid biosynthesis, elongation [PATH:rhy01100] rhy_M00086   beta-Oxidation, acyl-CoA synthesis [PATH:rhy01100] rhy_M00087   beta-Oxidation [PATH:rhy01100] rhy_M00093   Phosphatidylethanolamine (PE) biosynthesis, PA => PS => PE [PATH:rhy01100] rhy_M00115   NAD biosynthesis, aspartate => quinolinate => NAD [PATH:rhy01100] rhy_M00118   Glutathione biosynthesis, glutamate => glutathione [PATH:rhy01100] rhy_M00120   Coenzyme A biosynthesis, pantothenate => CoA [PATH:rhy01100] rhy_M00122   Cobalamin biosynthesis, cobyrinate a,c-diamide => cobalamin [PATH:rhy01100] rhy_M00123   Biotin biosynthesis, pimeloyl-ACP/CoA => biotin [PATH:rhy01100] rhy_M00125   Riboflavin biosynthesis, plants and bacteria, GTP => riboflavin/FMN/FAD [PATH:rhy01100] rhy_M00126   Tetrahydrofolate biosynthesis, GTP => THF [PATH:rhy01100] rhy_M00144   NADH:quinone oxidoreductase, prokaryotes [PATH:rhy01100] rhy_M00149   Succinate dehydrogenase, prokaryotes [PATH:rhy01100] rhy_M00151   Cytochrome bc1 complex respiratory unit [PATH:rhy01100] rhy_M00153   Cytochrome bd ubiquinol oxidase [PATH:rhy01100] rhy_M00155   Cytochrome c oxidase, prokaryotes [PATH:rhy01100] rhy_M00156   Cytochrome c oxidase, cbb3-type [PATH:rhy01100] rhy_M00157   F-type ATPase, prokaryotes and chloroplasts [PATH:rhy01100] rhy_M00168   CAM (Crassulacean acid metabolism), dark [PATH:rhy01100] rhy_M00307   Pyruvate oxidation, pyruvate => acetyl-CoA [PATH:rhy01100] rhy_M00417   Cytochrome o ubiquinol oxidase [PATH:rhy01100] rhy_M00432   Leucine biosynthesis, 2-oxoisovalerate => 2-oxoisocaproate [PATH:rhy01100] rhy_M00549   UDP-Glc biosynthesis, Glc => UDP-Glc [PATH:rhy01100] rhy_M00552   Galactonate degradation, De Ley-Doudoroff pathway, galactonate => glycerate-3P [PATH:rhy01100] rhy_M00570   Isoleucine biosynthesis, threonine => 2-oxobutanoate => isoleucine [PATH:rhy01100] rhy_M00621   Glycine cleavage system [PATH:rhy01100] rhy_M00623   Phthalate degradation, phthalate => protocatechuate [PATH:rhy01100] rhy_M00793   dTDP-L-Rha biosynthesis, Glc-1P => dTDP-L-Rha [PATH:rhy01100] rhy_M00844   Arginine biosynthesis, ornithine => arginine [PATH:rhy01100] rhy_M00880   Molybdenum cofactor biosynthesis, GTP => molybdenum cofactor [PATH:rhy01100] rhy_M00881   Lipoic acid biosynthesis, plants and bacteria, octanoyl-ACP => dihydrolipoyl-E2/H [PATH:rhy01100] rhy_M00909   UDP-GlcNAc biosynthesis, prokaryotes, Fru-6P => UDP-GlcNAc [PATH:rhy01100] rhy_M00938   Pyrimidine deoxyribonucleotide biosynthesis, UDP => dTTP [PATH:rhy01100] rhy_M00958   Adenine ribonucleotide degradation, AMP => Urate [PATH:rhy01100] rhy_M00959   Guanine ribonucleotide degradation, GMP => Urate [PATH:rhy01100] rhy_M00970   Proline degradation, proline => glutamate [PATH:rhy01100] rhy_M00988   PreQ1 biosynthesis, GTP => 7-Aminomethyl-7-deazaguanine [PATH:rhy01100] rhy_M00995   UDP-MurNAc biosynthesis, Fru-6P => UDP-MurNAc [PATH:rhy01100] rhy_M00996   UDP-MurNAc biosynthesis, anhMurNAc => UDP-MurNAc [PATH:rhy01100] rhy_M00999   UDP-GlcA/GalA biosynthesis, UDP-Glc => UDP-GlcA => UDP-GalA [PATH:rhy01100] rhy_M01000   GDP-Man biosynthesis, Fru-6P => GDP-Man [PATH:rhy01100] rhy_M01009   UDP-QuiNAc biosynthesis, UDP-GlcNAc => UDP-QuiNAc [PATH:rhy01100] rhy_M01016   GDP-L-Fuc biosynthesis, GDP-Man => GDP-L-Fuc [PATH:rhy01100] rhy_M01026   dTDP-Qui4NAc biosynthesis, Glc-1P => dTDP-Qui4NAc [PATH:rhy01100] Organism Rhodoferax koreensis [GN:rhy] Related pathway rhy00010   Glycolysis / Gluconeogenesis rhy00020   Citrate cycle (TCA cycle) rhy00030   Pentose phosphate pathway rhy00040   Pentose and glucuronate interconversions rhy00051   Fructose and mannose metabolism rhy00052   Galactose metabolism rhy00053   Ascorbate and aldarate metabolism rhy00061   Fatty acid biosynthesis rhy00071   Fatty acid degradation rhy00074   Mycolic acid biosynthesis rhy00130   Ubiquinone and other terpenoid-quinone biosynthesis rhy00190   Oxidative phosphorylation rhy00220   Arginine biosynthesis rhy00230   Purine metabolism rhy00240   Pyrimidine metabolism rhy00250   Alanine, aspartate and glutamate metabolism rhy00260   Glycine, serine and threonine metabolism rhy00261   Monobactam biosynthesis rhy00270   Cysteine and methionine metabolism rhy00280   Valine, leucine and isoleucine degradation rhy00290   Valine, leucine and isoleucine biosynthesis rhy00300   Lysine biosynthesis rhy00310   Lysine degradation rhy00330   Arginine and proline metabolism rhy00332   Carbapenem biosynthesis rhy00340   Histidine metabolism rhy00350   Tyrosine metabolism rhy00360   Phenylalanine metabolism rhy00361   Chlorocyclohexane and chlorobenzene degradation rhy00362   Benzoate degradation rhy00364   Fluorobenzoate degradation rhy00380   Tryptophan metabolism rhy00400   Phenylalanine, tyrosine and tryptophan biosynthesis rhy00401   Novobiocin biosynthesis rhy00410   beta-Alanine metabolism rhy00430   Taurine and hypotaurine metabolism rhy00440   Phosphonate and phosphinate metabolism rhy00450   Selenocompound metabolism rhy00460   Cyanoamino acid metabolism rhy00470   D-Amino acid metabolism rhy00480   Glutathione metabolism rhy00500   Starch and sucrose metabolism rhy00511   Other glycan degradation rhy00520   Amino sugar and nucleotide sugar metabolism rhy00521   Streptomycin biosynthesis rhy00523   Polyketide sugar unit biosynthesis rhy00525   Acarbose and validamycin biosynthesis rhy00540   Lipopolysaccharide biosynthesis rhy00541   Biosynthesis of various nucleotide sugars rhy00543   Exopolysaccharide biosynthesis rhy00550   Peptidoglycan biosynthesis rhy00552   Teichoic acid biosynthesis rhy00561   Glycerolipid metabolism rhy00562   Inositol phosphate metabolism rhy00564   Glycerophospholipid metabolism rhy00565   Ether lipid metabolism rhy00566   Sulfoquinovose metabolism rhy00592   alpha-Linolenic acid metabolism rhy00620   Pyruvate metabolism rhy00621   Dioxin degradation rhy00622   Xylene degradation rhy00623   Toluene degradation rhy00624   Polycyclic aromatic hydrocarbon degradation rhy00625   Chloroalkane and chloroalkene degradation rhy00626   Naphthalene degradation rhy00627   Aminobenzoate degradation rhy00630   Glyoxylate and dicarboxylate metabolism rhy00633   Nitrotoluene degradation rhy00640   Propanoate metabolism rhy00643   Styrene degradation rhy00650   Butanoate metabolism rhy00660   C5-Branched dibasic acid metabolism rhy00670   One carbon pool by folate rhy00680   Methane metabolism rhy00710   Carbon fixation by Calvin cycle rhy00720   Other carbon fixation pathways rhy00730   Thiamine metabolism rhy00740   Riboflavin metabolism rhy00750   Vitamin B6 metabolism rhy00760   Nicotinate and nicotinamide metabolism rhy00770   Pantothenate and CoA biosynthesis rhy00780   Biotin metabolism rhy00785   Lipoic acid metabolism rhy00790   Folate biosynthesis rhy00791   Atrazine degradation rhy00860   Porphyrin metabolism rhy00900   Terpenoid backbone biosynthesis rhy00906   Carotenoid biosynthesis rhy00907   Pinene, camphor and geraniol degradation rhy00910   Nitrogen metabolism rhy00920   Sulfur metabolism rhy00930   Caprolactam degradation rhy00946   Degradation of flavonoids rhy00984   Steroid degradation rhy00999   Biosynthesis of various plant secondary metabolites rhy01040   Biosynthesis of unsaturated fatty acids rhy01053   Biosynthesis of siderophore group nonribosomal peptides rhy01055   Biosynthesis of vancomycin group antibiotics KO pathway ko01100

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