PATHWAY: rii01100 Help Entry rii01100                    Pathway                                 Name Metabolic pathways - Rhizobium indicum Class BRITE hierarchy Pathway map rii01100   Metabolic pathways Module rii_M00002   Glycolysis, core module involving three-carbon compounds [PATH:rii01100] rii_M00004   Pentose phosphate pathway (Pentose phosphate cycle) [PATH:rii01100] rii_M00005   PRPP biosynthesis, ribose 5P => PRPP [PATH:rii01100] rii_M00006   Pentose phosphate pathway, oxidative phase, glucose 6P => ribulose 5P [PATH:rii01100] rii_M00007   Pentose phosphate pathway, non-oxidative phase, fructose 6P => ribose 5P [PATH:rii01100] rii_M00008   Entner-Doudoroff pathway, glucose-6P => glyceraldehyde-3P + pyruvate [PATH:rii01100] rii_M00009   Citrate cycle (TCA cycle, Krebs cycle) [PATH:rii01100] rii_M00010   Citrate cycle, first carbon oxidation, oxaloacetate => 2-oxoglutarate [PATH:rii01100] rii_M00011   Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate [PATH:rii01100] rii_M00012   Glyoxylate cycle [PATH:rii01100] rii_M00015   Proline biosynthesis, glutamate => proline [PATH:rii01100] rii_M00016   Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine [PATH:rii01100] rii_M00017   Methionine biosynthesis, aspartate => homoserine => methionine [PATH:rii01100] rii_M00018   Threonine biosynthesis, aspartate => homoserine => threonine [PATH:rii01100] rii_M00019   Valine/isoleucine biosynthesis, pyruvate => valine / 2-oxobutanoate => isoleucine [PATH:rii01100] rii_M00020   Serine biosynthesis, glycerate-3P => serine [PATH:rii01100] rii_M00021   Cysteine biosynthesis, serine => cysteine [PATH:rii01100] rii_M00022   Shikimate pathway, phosphoenolpyruvate + erythrose-4P => chorismate [PATH:rii01100] rii_M00023   Tryptophan biosynthesis, chorismate => tryptophan [PATH:rii01100] rii_M00026   Histidine biosynthesis, PRPP => histidine [PATH:rii01100] rii_M00028   Ornithine biosynthesis, glutamate => ornithine [PATH:rii01100] rii_M00045   Histidine degradation, histidine => N-formiminoglutamate => glutamate [PATH:rii01100] rii_M00046   Pyrimidine degradation, uracil => beta-alanine, thymine => 3-aminoisobutanoate [PATH:rii01100] rii_M00048   De novo purine biosynthesis, PRPP + glutamine => IMP [PATH:rii01100] rii_M00049   Adenine ribonucleotide biosynthesis, IMP => ADP,ATP [PATH:rii01100] rii_M00050   Guanine ribonucleotide biosynthesis, IMP => GDP,GTP [PATH:rii01100] rii_M00052   Pyrimidine ribonucleotide biosynthesis, UMP => UDP/UTP,CDP/CTP [PATH:rii01100] rii_M00053   Deoxyribonucleotide biosynthesis, ADP/GDP/CDP/UDP => dATP/dGTP/dCTP/dUTP [PATH:rii01100] rii_M00061   D-Glucuronate degradation, D-glucuronate => pyruvate + D-glyceraldehyde 3P [PATH:rii01100] rii_M00082   Fatty acid biosynthesis, initiation [PATH:rii01100] rii_M00083   Fatty acid biosynthesis, elongation [PATH:rii01100] rii_M00086   beta-Oxidation, acyl-CoA synthesis [PATH:rii01100] rii_M00091   Phosphatidylcholine (PC) biosynthesis, PE => PC [PATH:rii01100] rii_M00093   Phosphatidylethanolamine (PE) biosynthesis, PA => PS => PE [PATH:rii01100] rii_M00115   NAD biosynthesis, aspartate => quinolinate => NAD [PATH:rii01100] rii_M00118   Glutathione biosynthesis, glutamate => glutathione [PATH:rii01100] rii_M00120   Coenzyme A biosynthesis, pantothenate => CoA [PATH:rii01100] rii_M00126   Tetrahydrofolate biosynthesis, GTP => THF [PATH:rii01100] rii_M00134   Polyamine biosynthesis, arginine => ornithine => putrescine [PATH:rii01100] rii_M00140   C1-unit interconversion, prokaryotes [PATH:rii01100] rii_M00144   NADH:quinone oxidoreductase, prokaryotes [PATH:rii01100] rii_M00149   Succinate dehydrogenase, prokaryotes [PATH:rii01100] rii_M00151   Cytochrome bc1 complex respiratory unit [PATH:rii01100] rii_M00155   Cytochrome c oxidase, prokaryotes [PATH:rii01100] rii_M00156   Cytochrome c oxidase, cbb3-type [PATH:rii01100] rii_M00157   F-type ATPase, prokaryotes and chloroplasts [PATH:rii01100] rii_M00168   CAM (Crassulacean acid metabolism), dark [PATH:rii01100] rii_M00169   CAM (Crassulacean acid metabolism), light [PATH:rii01100] rii_M00175   Nitrogen fixation, nitrogen => ammonia [PATH:rii01100] rii_M00307   Pyruvate oxidation, pyruvate => acetyl-CoA [PATH:rii01100] rii_M00432   Leucine biosynthesis, 2-oxoisovalerate => 2-oxoisocaproate [PATH:rii01100] rii_M00531   Assimilatory nitrate reduction, nitrate => ammonia [PATH:rii01100] rii_M00549   Nucleotide sugar biosynthesis, glucose => UDP-glucose [PATH:rii01100] rii_M00552   D-galactonate degradation, De Ley-Doudoroff pathway, D-galactonate => glycerate-3P [PATH:rii01100] rii_M00555   Betaine biosynthesis, choline => betaine [PATH:rii01100] rii_M00565   Trehalose biosynthesis, D-glucose 1P => trehalose [PATH:rii01100] rii_M00570   Isoleucine biosynthesis, threonine => 2-oxobutanoate => isoleucine [PATH:rii01100] rii_M00621   Glycine cleavage system [PATH:rii01100] rii_M00622   Nicotinate degradation, nicotinate => fumarate [PATH:rii01100] rii_M00741   Propanoyl-CoA metabolism, propanoyl-CoA => succinyl-CoA [PATH:rii01100] rii_M00793   dTDP-L-rhamnose biosynthesis [PATH:rii01100] rii_M00844   Arginine biosynthesis, ornithine => arginine [PATH:rii01100] rii_M00854   Glycogen biosynthesis, glucose-1P => glycogen/starch [PATH:rii01100] rii_M00855   Glycogen degradation, glycogen => glucose-6P [PATH:rii01100] rii_M00880   Molybdenum cofactor biosynthesis, GTP => molybdenum cofactor [PATH:rii01100] rii_M00881   Lipoic acid biosynthesis, plants and bacteria, octanoyl-ACP => dihydrolipoyl-E2/H [PATH:rii01100] rii_M00899   Thiamine salvage pathway, HMP/HET => TMP [PATH:rii01100] rii_M00909   UDP-N-acetyl-D-glucosamine biosynthesis, prokaryotes, glucose => UDP-GlcNAc [PATH:rii01100] rii_M00925   Cobalamin biosynthesis, aerobic, uroporphyrinogen III => precorrin 2 => cobyrinate a,c-diamide [PATH:rii01100] rii_M00938   Pyrimidine deoxyribonucleotide biosynthesis, UDP => dTTP [PATH:rii01100] rii_M00958   Adenine ribonucleotide degradation, AMP => Urate [PATH:rii01100] rii_M00959   Guanine ribonucleotide degradation, GMP => Urate [PATH:rii01100] rii_M00970   Proline degradation, proline => glutamate [PATH:rii01100] Organism Rhizobium indicum [GN:rii] Related pathway rii00010   Glycolysis / Gluconeogenesis rii00020   Citrate cycle (TCA cycle) rii00030   Pentose phosphate pathway rii00040   Pentose and glucuronate interconversions rii00051   Fructose and mannose metabolism rii00052   Galactose metabolism rii00053   Ascorbate and aldarate metabolism rii00061   Fatty acid biosynthesis rii00071   Fatty acid degradation rii00130   Ubiquinone and other terpenoid-quinone biosynthesis rii00190   Oxidative phosphorylation rii00220   Arginine biosynthesis rii00230   Purine metabolism rii00240   Pyrimidine metabolism rii00250   Alanine, aspartate and glutamate metabolism rii00260   Glycine, serine and threonine metabolism rii00261   Monobactam biosynthesis rii00270   Cysteine and methionine metabolism rii00280   Valine, leucine and isoleucine degradation rii00290   Valine, leucine and isoleucine biosynthesis rii00300   Lysine biosynthesis rii00310   Lysine degradation rii00311   Penicillin and cephalosporin biosynthesis rii00330   Arginine and proline metabolism rii00332   Carbapenem biosynthesis rii00340   Histidine metabolism rii00350   Tyrosine metabolism rii00360   Phenylalanine metabolism rii00361   Chlorocyclohexane and chlorobenzene degradation rii00362   Benzoate degradation rii00364   Fluorobenzoate degradation rii00380   Tryptophan metabolism rii00400   Phenylalanine, tyrosine and tryptophan biosynthesis rii00401   Novobiocin biosynthesis rii00410   beta-Alanine metabolism rii00430   Taurine and hypotaurine metabolism rii00440   Phosphonate and phosphinate metabolism rii00450   Selenocompound metabolism rii00460   Cyanoamino acid metabolism rii00470   D-Amino acid metabolism rii00480   Glutathione metabolism rii00500   Starch and sucrose metabolism rii00511   Other glycan degradation rii00520   Amino sugar and nucleotide sugar metabolism rii00521   Streptomycin biosynthesis rii00523   Polyketide sugar unit biosynthesis rii00525   Acarbose and validamycin biosynthesis rii00540   Lipopolysaccharide biosynthesis rii00541   O-Antigen nucleotide sugar biosynthesis rii00543   Exopolysaccharide biosynthesis rii00550   Peptidoglycan biosynthesis rii00552   Teichoic acid biosynthesis rii00561   Glycerolipid metabolism rii00562   Inositol phosphate metabolism rii00564   Glycerophospholipid metabolism rii00600   Sphingolipid metabolism rii00620   Pyruvate metabolism rii00621   Dioxin degradation rii00622   Xylene degradation rii00623   Toluene degradation rii00624   Polycyclic aromatic hydrocarbon degradation rii00625   Chloroalkane and chloroalkene degradation rii00626   Naphthalene degradation rii00627   Aminobenzoate degradation rii00630   Glyoxylate and dicarboxylate metabolism rii00633   Nitrotoluene degradation rii00640   Propanoate metabolism rii00643   Styrene degradation rii00650   Butanoate metabolism rii00660   C5-Branched dibasic acid metabolism rii00670   One carbon pool by folate rii00680   Methane metabolism rii00730   Thiamine metabolism rii00740   Riboflavin metabolism rii00750   Vitamin B6 metabolism rii00760   Nicotinate and nicotinamide metabolism rii00770   Pantothenate and CoA biosynthesis rii00780   Biotin metabolism rii00785   Lipoic acid metabolism rii00790   Folate biosynthesis rii00791   Atrazine degradation rii00860   Porphyrin metabolism rii00900   Terpenoid backbone biosynthesis rii00903   Limonene degradation rii00906   Carotenoid biosynthesis rii00907   Pinene, camphor and geraniol degradation rii00910   Nitrogen metabolism rii00920   Sulfur metabolism rii00930   Caprolactam degradation rii00946   Degradation of flavonoids rii00996   Biosynthesis of various alkaloids rii00997   Biosynthesis of various other secondary metabolites rii00999   Biosynthesis of various plant secondary metabolites rii01040   Biosynthesis of unsaturated fatty acids KO pathway ko01100     LinkDB All DBs

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