KEGG   PATHWAY: scar00010
Entry
scar00010                   Pathway                                
Name
Glycolysis / Gluconeogenesis - Staphylococcus caprae
Description
Glycolysis is the process of converting glucose into pyruvate and generating small amounts of ATP (energy) and NADH (reducing power). It is a central pathway that produces important precursor metabolites: six-carbon compounds of glucose-6P and fructose-6P and three-carbon compounds of glycerone-P, glyceraldehyde-3P, glycerate-3P, phosphoenolpyruvate, and pyruvate [MD:M00001]. Acetyl-CoA, another important precursor metabolite, is produced by oxidative decarboxylation of pyruvate [MD:M00307]. When the enzyme genes of this pathway are examined in completely sequenced genomes, the reaction steps of three-carbon compounds from glycerone-P to pyruvate form a conserved core module [MD:M00002], which is found in almost all organisms and which sometimes contains operon structures in bacterial genomes. Gluconeogenesis is a synthesis pathway of glucose from noncarbohydrate precursors. It is essentially a reversal of glycolysis with minor variations of alternative paths [MD:M00003].
Class
Metabolism; Carbohydrate metabolism
Pathway map
scar00010  Glycolysis / Gluconeogenesis
scar00010

Module
scar_M00001  Glycolysis (Embden-Meyerhof pathway), glucose => pyruvate [PATH:scar00010]
scar_M00002  Glycolysis, core module involving three-carbon compounds [PATH:scar00010]
scar_M00003  Gluconeogenesis, oxaloacetate => fructose-6P [PATH:scar00010]
scar_M00307  Pyruvate oxidation, pyruvate => acetyl-CoA [PATH:scar00010]
Other DBs
GO: 0006096 0006094
Organism
Staphylococcus caprae [GN:scar]
Gene
DWB96_06575  ROK family protein [KO:K25026] [EC:2.7.1.2]
DWB96_09770  glucose-6-phosphate isomerase [KO:K01810] [EC:5.3.1.9]
DWB96_05900  pfkA; 6-phosphofructokinase [KO:K00850] [EC:2.7.1.11]
DWB96_02270  fructose-1,6-bisphosphatase [KO:K04041] [EC:3.1.3.11]
DWB96_01695  fructose bisphosphate aldolase [KO:K01623] [EC:4.1.2.13]
DWB96_04050  fructose-bisphosphate aldolase [KO:K01624] [EC:4.1.2.13]
DWB96_10335  triose-phosphate isomerase [KO:K01803] [EC:5.3.1.1]
DWB96_10345  gap; type I glyceraldehyde-3-phosphate dehydrogenase [KO:K00134] [EC:1.2.1.12]
DWB96_05950  gap; type I glyceraldehyde-3-phosphate dehydrogenase [KO:K00150] [EC:1.2.1.59]
DWB96_10340  pgk; phosphoglycerate kinase [KO:K00927] [EC:2.7.2.3]
DWB96_12580  histidine phosphatase family protein [KO:K01834] [EC:5.4.2.11]
DWB96_02610  phosphoglycerate mutase [KO:K01834] [EC:5.4.2.11]
DWB96_10330  2,3-bisphosphoglycerate-independent phosphoglycerate mutase [KO:K15633] [EC:5.4.2.12]
DWB96_10325  phosphopyruvate hydratase [KO:K01689] [EC:4.2.1.11]
DWB96_05905  pyk; pyruvate kinase [KO:K00873] [EC:2.7.1.40]
DWB96_01655  pyruvate, phosphate dikinase [KO:K01006] [EC:2.7.9.1]
DWB96_09220  pdhA; pyruvate dehydrogenase (acetyl-transferring) E1 component subunit alpha [KO:K00161] [EC:1.2.4.1]
DWB96_09215  alpha-ketoacid dehydrogenase subunit beta [KO:K00162] [EC:1.2.4.1]
DWB96_09210  2-oxo acid dehydrogenase subunit E2 [KO:K00627] [EC:2.3.1.12]
DWB96_06740  lpdA; dihydrolipoyl dehydrogenase [KO:K00382] [EC:1.8.1.4]
DWB96_09205  lpdA; dihydrolipoyl dehydrogenase [KO:K00382] [EC:1.8.1.4]
DWB96_07940  2-oxoacid:acceptor oxidoreductase subunit alpha [KO:K00174] [EC:1.2.7.3 1.2.7.11]
DWB96_07935  2-oxoacid:ferredoxin oxidoreductase subunit beta [KO:K00175] [EC:1.2.7.3 1.2.7.11]
DWB96_01760  L-lactate dehydrogenase [KO:K00016] [EC:1.1.1.27]
DWB96_02235  aldehyde dehydrogenase family protein [KO:K00128] [EC:1.2.1.3]
DWB96_04065  aldehyde dehydrogenase family protein [KO:K00128] [EC:1.2.1.3]
DWB96_01650  acyl--CoA ligase [KO:K01895] [EC:6.2.1.1]
DWB96_05725  acetate--CoA ligase [KO:K01895] [EC:6.2.1.1]
DWB96_03050  galactose mutarotase [KO:K01785] [EC:5.1.3.3]
DWB96_09415  phospho-sugar mutase [KO:K01835] [EC:5.4.2.2]
DWB96_05480  pckA; phosphoenolpyruvate carboxykinase (ATP) [KO:K01610] [EC:4.1.1.49]
DWB96_07135  PTS glucose transporter subunit IIA [KO:K02777] [EC:2.7.1.-]
DWB96_02090  PTS glucose transporter subunit IICBA [KO:K20118] [EC:2.7.1.199]
Compound
C00022  Pyruvate
C00024  Acetyl-CoA
C00031  D-Glucose
C00033  Acetate
C00036  Oxaloacetate
C00068  Thiamin diphosphate
C00074  Phosphoenolpyruvate
C00084  Acetaldehyde
C00085  D-Fructose 6-phosphate
C00103  D-Glucose 1-phosphate
C00111  Glycerone phosphate
C00118  D-Glyceraldehyde 3-phosphate
C00186  (S)-Lactate
C00197  3-Phospho-D-glycerate
C00221  beta-D-Glucose
C00236  3-Phospho-D-glyceroyl phosphate
C00267  alpha-D-Glucose
C00354  D-Fructose 1,6-bisphosphate
C00469  Ethanol
C00631  2-Phospho-D-glycerate
C00668  alpha-D-Glucose 6-phosphate
C01159  2,3-Bisphospho-D-glycerate
C01172  beta-D-Glucose 6-phosphate
C01451  Salicin
C05125  2-(alpha-Hydroxyethyl)thiamine diphosphate
C06186  Arbutin
C06187  Arbutin 6-phosphate
C06188  Salicin 6-phosphate
C15972  Enzyme N6-(lipoyl)lysine
C15973  Enzyme N6-(dihydrolipoyl)lysine
C16255  [Dihydrolipoyllysine-residue acetyltransferase] S-acetyldihydrolipoyllysine
Reference
  Authors
Nishizuka Y (ed).
  Title
[Metabolic Maps] (In Japanese)
  Journal
Tokyo Kagaku Dojin (1980)
Reference
  Authors
Nishizuka Y, Seyama Y, Ikai A, Ishimura Y, Kawaguchi A (eds).
  Title
[Cellular Functions and Metabolic Maps] (In Japanese)
  Journal
Tokyo Kagaku Dojin (1997)
Reference
  Authors
Michal G.
  Title
Biochemical Pathways
  Journal
Wiley (1999)
Related
pathway
scar00020  Citrate cycle (TCA cycle)
scar00030  Pentose phosphate pathway
scar00500  Starch and sucrose metabolism
scar00620  Pyruvate metabolism
scar00640  Propanoate metabolism
scar00710  Carbon fixation by Calvin cycle
KO pathway
ko00010   
LinkDB

DBGET integrated database retrieval system