KEGG   PATHWAY: sep01100
Entry
sep01100                    Pathway                                
Name
Metabolic pathways - Staphylococcus epidermidis ATCC 12228
Class
Pathway map
sep01100  Metabolic pathways
sep01100

Module
sep_M00001  Glycolysis (Embden-Meyerhof pathway), glucose => pyruvate [PATH:sep01100]
sep_M00002  Glycolysis, core module involving three-carbon compounds [PATH:sep01100]
sep_M00003  Gluconeogenesis, oxaloacetate => fructose-6P [PATH:sep01100]
sep_M00004  Pentose phosphate pathway (Pentose phosphate cycle) [PATH:sep01100]
sep_M00005  PRPP biosynthesis, ribose 5P => PRPP [PATH:sep01100]
sep_M00006  Pentose phosphate pathway, oxidative phase, glucose 6P => ribulose 5P [PATH:sep01100]
sep_M00007  Pentose phosphate pathway, non-oxidative phase, fructose 6P => ribose 5P [PATH:sep01100]
sep_M00009  Citrate cycle (TCA cycle, Krebs cycle) [PATH:sep01100]
sep_M00010  Citrate cycle, first carbon oxidation, oxaloacetate => 2-oxoglutarate [PATH:sep01100]
sep_M00011  Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate [PATH:sep01100]
sep_M00017  Methionine biosynthesis, aspartate => homoserine => methionine [PATH:sep01100]
sep_M00018  Threonine biosynthesis, aspartate => homoserine => threonine [PATH:sep01100]
sep_M00019  Valine/isoleucine biosynthesis, pyruvate => valine / 2-oxobutanoate => isoleucine [PATH:sep01100]
sep_M00021  Cysteine biosynthesis, serine => cysteine [PATH:sep01100]
sep_M00022  Shikimate pathway, phosphoenolpyruvate + erythrose-4P => chorismate [PATH:sep01100]
sep_M00023  Tryptophan biosynthesis, chorismate => tryptophan [PATH:sep01100]
sep_M00028  Ornithine biosynthesis, glutamate => ornithine [PATH:sep01100]
sep_M00048  De novo purine biosynthesis, PRPP + glutamine => IMP [PATH:sep01100]
sep_M00049  Adenine ribonucleotide biosynthesis, IMP => ADP,ATP [PATH:sep01100]
sep_M00050  Guanine ribonucleotide biosynthesis, IMP => GDP,GTP [PATH:sep01100]
sep_M00052  Pyrimidine ribonucleotide biosynthesis, UMP => UDP/UTP,CDP/CTP [PATH:sep01100]
sep_M00053  Deoxyribonucleotide biosynthesis, ADP/GDP/CDP/UDP => dATP/dGTP/dCTP/dUTP [PATH:sep01100]
sep_M00082  Fatty acid biosynthesis, initiation [PATH:sep01100]
sep_M00083  Fatty acid biosynthesis, elongation [PATH:sep01100]
sep_M00086  beta-Oxidation, acyl-CoA synthesis [PATH:sep01100]
sep_M00116  Menaquinone biosynthesis, chorismate (+ polyprenyl-PP) => menaquinol [PATH:sep01100]
sep_M00119  Pantothenate biosynthesis, valine/L-aspartate => pantothenate [PATH:sep01100]
sep_M00120  Coenzyme A biosynthesis, pantothenate => CoA [PATH:sep01100]
sep_M00123  Biotin biosynthesis, pimeloyl-ACP/CoA => biotin [PATH:sep01100]
sep_M00125  Riboflavin biosynthesis, plants and bacteria, GTP => riboflavin/FMN/FAD [PATH:sep01100]
sep_M00126  Tetrahydrofolate biosynthesis, GTP => THF [PATH:sep01100]
sep_M00140  C1-unit interconversion, prokaryotes [PATH:sep01100]
sep_M00157  F-type ATPase, prokaryotes and chloroplasts [PATH:sep01100]
sep_M00176  Assimilatory sulfate reduction, sulfate => H2S [PATH:sep01100]
sep_M00307  Pyruvate oxidation, pyruvate => acetyl-CoA [PATH:sep01100]
sep_M00345  Formaldehyde assimilation, ribulose monophosphate pathway [PATH:sep01100]
sep_M00364  C10-C20 isoprenoid biosynthesis, bacteria [PATH:sep01100]
sep_M00416  Cytochrome aa3-600 menaquinol oxidase [PATH:sep01100]
sep_M00432  Leucine biosynthesis, 2-oxoisovalerate => 2-oxoisocaproate [PATH:sep01100]
sep_M00549  Nucleotide sugar biosynthesis, glucose => UDP-glucose [PATH:sep01100]
sep_M00555  Betaine biosynthesis, choline => betaine [PATH:sep01100]
sep_M00570  Isoleucine biosynthesis, threonine => 2-oxobutanoate => isoleucine [PATH:sep01100]
sep_M00577  Biotin biosynthesis, BioW pathway, pimelate => pimeloyl-CoA => biotin [PATH:sep01100]
sep_M00579  Phosphate acetyltransferase-acetate kinase pathway, acetyl-CoA => acetate [PATH:sep01100]
sep_M00580  Pentose phosphate pathway, archaea, fructose 6P => ribose 5P [PATH:sep01100]
sep_M00621  Glycine cleavage system [PATH:sep01100]
sep_M00844  Arginine biosynthesis, ornithine => arginine [PATH:sep01100]
sep_M00876  Staphyloferrin A biosynthesis, L-ornithine => staphyloferrin A [PATH:sep01100]
sep_M00880  Molybdenum cofactor biosynthesis, GTP => molybdenum cofactor [PATH:sep01100]
sep_M00883  Lipoic acid biosynthesis, animals and bacteria, octanoyl-ACP => dihydrolipoyl-H => dihydrolipoyl-E2 [PATH:sep01100]
sep_M00899  Thiamine salvage pathway, HMP/HET => TMP [PATH:sep01100]
sep_M00909  UDP-N-acetyl-D-glucosamine biosynthesis, prokaryotes, glucose => UDP-GlcNAc [PATH:sep01100]
sep_M00916  Pyridoxal-P biosynthesis, R5P + glyceraldehyde-3P + glutamine => pyridoxal-P [PATH:sep01100]
sep_M00926  Heme biosynthesis, bacteria, glutamyl-tRNA => coproporphyrin III => heme [PATH:sep01100]
sep_M00949  Staphylopine biosynthesis, L-histidine => staphylopine [PATH:sep01100]
sep_M00970  Proline degradation, proline => glutamate [PATH:sep01100]
sep_M00972  Proline metabolism [PATH:sep01100]
Organism
Staphylococcus epidermidis ATCC 12228 [GN:sep]
Related
pathway
sep00010  Glycolysis / Gluconeogenesis
sep00020  Citrate cycle (TCA cycle)
sep00030  Pentose phosphate pathway
sep00040  Pentose and glucuronate interconversions
sep00051  Fructose and mannose metabolism
sep00052  Galactose metabolism
sep00061  Fatty acid biosynthesis
sep00071  Fatty acid degradation
sep00130  Ubiquinone and other terpenoid-quinone biosynthesis
sep00190  Oxidative phosphorylation
sep00220  Arginine biosynthesis
sep00230  Purine metabolism
sep00240  Pyrimidine metabolism
sep00250  Alanine, aspartate and glutamate metabolism
sep00260  Glycine, serine and threonine metabolism
sep00261  Monobactam biosynthesis
sep00270  Cysteine and methionine metabolism
sep00280  Valine, leucine and isoleucine degradation
sep00290  Valine, leucine and isoleucine biosynthesis
sep00300  Lysine biosynthesis
sep00310  Lysine degradation
sep00330  Arginine and proline metabolism
sep00340  Histidine metabolism
sep00350  Tyrosine metabolism
sep00360  Phenylalanine metabolism
sep00362  Benzoate degradation
sep00380  Tryptophan metabolism
sep00400  Phenylalanine, tyrosine and tryptophan biosynthesis
sep00401  Novobiocin biosynthesis
sep00410  beta-Alanine metabolism
sep00430  Taurine and hypotaurine metabolism
sep00450  Selenocompound metabolism
sep00460  Cyanoamino acid metabolism
sep00470  D-Amino acid metabolism
sep00480  Glutathione metabolism
sep00500  Starch and sucrose metabolism
sep00520  Amino sugar and nucleotide sugar metabolism
sep00521  Streptomycin biosynthesis
sep00541  O-Antigen nucleotide sugar biosynthesis
sep00542  O-Antigen repeat unit biosynthesis
sep00543  Exopolysaccharide biosynthesis
sep00550  Peptidoglycan biosynthesis
sep00552  Teichoic acid biosynthesis
sep00561  Glycerolipid metabolism
sep00562  Inositol phosphate metabolism
sep00564  Glycerophospholipid metabolism
sep00620  Pyruvate metabolism
sep00621  Dioxin degradation
sep00622  Xylene degradation
sep00625  Chloroalkane and chloroalkene degradation
sep00626  Naphthalene degradation
sep00630  Glyoxylate and dicarboxylate metabolism
sep00640  Propanoate metabolism
sep00650  Butanoate metabolism
sep00660  C5-Branched dibasic acid metabolism
sep00670  One carbon pool by folate
sep00680  Methane metabolism
sep00710  Carbon fixation by Calvin cycle
sep00720  Other carbon fixation pathways
sep00730  Thiamine metabolism
sep00740  Riboflavin metabolism
sep00750  Vitamin B6 metabolism
sep00760  Nicotinate and nicotinamide metabolism
sep00770  Pantothenate and CoA biosynthesis
sep00780  Biotin metabolism
sep00785  Lipoic acid metabolism
sep00790  Folate biosynthesis
sep00860  Porphyrin metabolism
sep00900  Terpenoid backbone biosynthesis
sep00910  Nitrogen metabolism
sep00920  Sulfur metabolism
sep00997  Biosynthesis of various other secondary metabolites
sep00999  Biosynthesis of various plant secondary metabolites
KO pathway
ko01100   
LinkDB

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