KEGG   PATHWAY: sfv01100
Entry
sfv01100                    Pathway                                
Name
Metabolic pathways - Shigella flexneri 8401 (serotype 5b)
Class
Pathway map
sfv01100  Metabolic pathways
sfv01100

Module
sfv_M00001  Glycolysis (Embden-Meyerhof pathway), glucose => pyruvate [PATH:sfv01100]
sfv_M00002  Glycolysis, core module involving three-carbon compounds [PATH:sfv01100]
sfv_M00003  Gluconeogenesis, oxaloacetate => fructose-6P [PATH:sfv01100]
sfv_M00004  Pentose phosphate pathway (Pentose phosphate cycle) [PATH:sfv01100]
sfv_M00005  PRPP biosynthesis, ribose 5P => PRPP [PATH:sfv01100]
sfv_M00006  Pentose phosphate pathway, oxidative phase, glucose 6P => ribulose 5P [PATH:sfv01100]
sfv_M00007  Pentose phosphate pathway, non-oxidative phase, fructose 6P => ribose 5P [PATH:sfv01100]
sfv_M00008  Entner-Doudoroff pathway, glucose-6P => glyceraldehyde-3P + pyruvate [PATH:sfv01100]
sfv_M00009  Citrate cycle (TCA cycle, Krebs cycle) [PATH:sfv01100]
sfv_M00010  Citrate cycle, first carbon oxidation, oxaloacetate => 2-oxoglutarate [PATH:sfv01100]
sfv_M00011  Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate [PATH:sfv01100]
sfv_M00012  Glyoxylate cycle [PATH:sfv01100]
sfv_M00015  Proline biosynthesis, glutamate => proline [PATH:sfv01100]
sfv_M00016  Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine [PATH:sfv01100]
sfv_M00017  Methionine biosynthesis, aspartate => homoserine => methionine [PATH:sfv01100]
sfv_M00018  Threonine biosynthesis, aspartate => homoserine => threonine [PATH:sfv01100]
sfv_M00019  Valine/isoleucine biosynthesis, pyruvate => valine / 2-oxobutanoate => isoleucine [PATH:sfv01100]
sfv_M00020  Serine biosynthesis, glycerate-3P => serine [PATH:sfv01100]
sfv_M00021  Cysteine biosynthesis, serine => cysteine [PATH:sfv01100]
sfv_M00022  Shikimate pathway, phosphoenolpyruvate + erythrose-4P => chorismate [PATH:sfv01100]
sfv_M00023  Tryptophan biosynthesis, chorismate => tryptophan [PATH:sfv01100]
sfv_M00024  Phenylalanine biosynthesis, chorismate => phenylpyruvate => phenylalanine [PATH:sfv01100]
sfv_M00025  Tyrosine biosynthesis, chorismate => HPP => tyrosine [PATH:sfv01100]
sfv_M00026  Histidine biosynthesis, PRPP => histidine [PATH:sfv01100]
sfv_M00028  Ornithine biosynthesis, glutamate => ornithine [PATH:sfv01100]
sfv_M00048  De novo purine biosynthesis, PRPP + glutamine => IMP [PATH:sfv01100]
sfv_M00049  Adenine ribonucleotide biosynthesis, IMP => ADP,ATP [PATH:sfv01100]
sfv_M00050  Guanine ribonucleotide biosynthesis, IMP => GDP,GTP [PATH:sfv01100]
sfv_M00051  De novo pyrimidine biosynthesis, glutamine (+ PRPP) => UMP [PATH:sfv01100]
sfv_M00052  Pyrimidine ribonucleotide biosynthesis, UMP => UDP/UTP,CDP/CTP [PATH:sfv01100]
sfv_M00053  Deoxyribonucleotide biosynthesis, ADP/GDP/CDP/UDP => dATP/dGTP/dCTP/dUTP [PATH:sfv01100]
sfv_M00060  KDO2-lipid A biosynthesis, Raetz pathway, LpxL-LpxM type [PATH:sfv01100]
sfv_M00061  D-Glucuronate degradation, D-glucuronate => pyruvate + D-glyceraldehyde 3P [PATH:sfv01100]
sfv_M00063  CMP-KDO biosynthesis [PATH:sfv01100]
sfv_M00064  ADP-L-glycero-D-manno-heptose biosynthesis [PATH:sfv01100]
sfv_M00082  Fatty acid biosynthesis, initiation [PATH:sfv01100]
sfv_M00083  Fatty acid biosynthesis, elongation [PATH:sfv01100]
sfv_M00086  beta-Oxidation, acyl-CoA synthesis [PATH:sfv01100]
sfv_M00087  beta-Oxidation [PATH:sfv01100]
sfv_M00093  Phosphatidylethanolamine (PE) biosynthesis, PA => PS => PE [PATH:sfv01100]
sfv_M00096  C5 isoprenoid biosynthesis, non-mevalonate pathway [PATH:sfv01100]
sfv_M00116  Menaquinone biosynthesis, chorismate (+ polyprenyl-PP) => menaquinol [PATH:sfv01100]
sfv_M00117  Ubiquinone biosynthesis, prokaryotes, chorismate (+ polyprenyl-PP) => ubiquinol [PATH:sfv01100]
sfv_M00118  Glutathione biosynthesis, glutamate => glutathione [PATH:sfv01100]
sfv_M00119  Pantothenate biosynthesis, valine/L-aspartate => pantothenate [PATH:sfv01100]
sfv_M00120  Coenzyme A biosynthesis, pantothenate => CoA [PATH:sfv01100]
sfv_M00121  Heme biosynthesis, plants and bacteria, glutamate => heme [PATH:sfv01100]
sfv_M00123  Biotin biosynthesis, pimeloyl-ACP/CoA => biotin [PATH:sfv01100]
sfv_M00124  Pyridoxal-P biosynthesis, erythrose-4P => pyridoxal-P [PATH:sfv01100]
sfv_M00125  Riboflavin biosynthesis, plants and bacteria, GTP => riboflavin/FMN/FAD [PATH:sfv01100]
sfv_M00126  Tetrahydrofolate biosynthesis, GTP => THF [PATH:sfv01100]
sfv_M00127  Thiamine biosynthesis, prokaryotes, AIR (+ DXP/tyrosine) => TMP/TPP [PATH:sfv01100]
sfv_M00133  Polyamine biosynthesis, arginine => agmatine => putrescine => spermidine [PATH:sfv01100]
sfv_M00136  GABA biosynthesis, prokaryotes, putrescine => GABA [PATH:sfv01100]
sfv_M00144  NADH:quinone oxidoreductase, prokaryotes [PATH:sfv01100]
sfv_M00149  Succinate dehydrogenase, prokaryotes [PATH:sfv01100]
sfv_M00150  Fumarate reductase, prokaryotes [PATH:sfv01100]
sfv_M00157  F-type ATPase, prokaryotes and chloroplasts [PATH:sfv01100]
sfv_M00168  CAM (Crassulacean acid metabolism), dark [PATH:sfv01100]
sfv_M00176  Assimilatory sulfate reduction, sulfate => H2S [PATH:sfv01100]
sfv_M00307  Pyruvate oxidation, pyruvate => acetyl-CoA [PATH:sfv01100]
sfv_M00364  C10-C20 isoprenoid biosynthesis, bacteria [PATH:sfv01100]
sfv_M00432  Leucine biosynthesis, 2-oxoisovalerate => 2-oxoisocaproate [PATH:sfv01100]
sfv_M00530  Dissimilatory nitrate reduction, nitrate => ammonia [PATH:sfv01100]
sfv_M00533  Homoprotocatechuate degradation, homoprotocatechuate => 2-oxohept-3-enedioate [PATH:sfv01100]
sfv_M00549  Nucleotide sugar biosynthesis, glucose => UDP-glucose [PATH:sfv01100]
sfv_M00550  Ascorbate degradation, ascorbate => D-xylulose-5P [PATH:sfv01100]
sfv_M00554  Nucleotide sugar biosynthesis, galactose => UDP-galactose [PATH:sfv01100]
sfv_M00555  Betaine biosynthesis, choline => betaine [PATH:sfv01100]
sfv_M00570  Isoleucine biosynthesis, threonine => 2-oxobutanoate => isoleucine [PATH:sfv01100]
sfv_M00572  Pimeloyl-ACP biosynthesis, BioC-BioH pathway, malonyl-ACP => pimeloyl-ACP [PATH:sfv01100]
sfv_M00579  Phosphate acetyltransferase-acetate kinase pathway, acetyl-CoA => acetate [PATH:sfv01100]
sfv_M00621  Glycine cleavage system [PATH:sfv01100]
sfv_M00631  D-Galacturonate degradation (bacteria), D-galacturonate => pyruvate + D-glyceraldehyde 3P [PATH:sfv01100]
sfv_M00632  Galactose degradation, Leloir pathway, galactose => alpha-D-glucose-1P [PATH:sfv01100]
sfv_M00761  Undecaprenylphosphate alpha-L-Ara4N biosynthesis, UDP-GlcA => undecaprenyl phosphate alpha-L-Ara4N [PATH:sfv01100]
sfv_M00793  dTDP-L-rhamnose biosynthesis [PATH:sfv01100]
sfv_M00844  Arginine biosynthesis, ornithine => arginine [PATH:sfv01100]
sfv_M00846  Siroheme biosynthesis, glutamyl-tRNA => siroheme [PATH:sfv01100]
sfv_M00854  Glycogen biosynthesis, glucose-1P => glycogen/starch [PATH:sfv01100]
sfv_M00855  Glycogen degradation, glycogen => glucose-6P [PATH:sfv01100]
sfv_M00880  Molybdenum cofactor biosynthesis, GTP => molybdenum cofactor [PATH:sfv01100]
sfv_M00881  Lipoic acid biosynthesis, plants and bacteria, octanoyl-ACP => dihydrolipoyl-E2/H [PATH:sfv01100]
sfv_M00899  Thiamine salvage pathway, HMP/HET => TMP [PATH:sfv01100]
sfv_M00909  UDP-N-acetyl-D-glucosamine biosynthesis, prokaryotes, glucose => UDP-GlcNAc [PATH:sfv01100]
sfv_M00918  Aerobactin biosynthesis, lysine => aerobactin [PATH:sfv01100]
sfv_M00938  Pyrimidine deoxyribonucleotide biosynthesis, UDP => dTTP [PATH:sfv01100]
sfv_M00939  Pyrimidine degradation, uracil => 3-hydroxypropanoate [PATH:sfv01100]
sfv_M00958  Adenine ribonucleotide degradation, AMP => Urate [PATH:sfv01100]
Organism
Shigella flexneri 8401 (serotype 5b) [GN:sfv]
Related
pathway
sfv00010  Glycolysis / Gluconeogenesis
sfv00020  Citrate cycle (TCA cycle)
sfv00030  Pentose phosphate pathway
sfv00040  Pentose and glucuronate interconversions
sfv00051  Fructose and mannose metabolism
sfv00052  Galactose metabolism
sfv00053  Ascorbate and aldarate metabolism
sfv00061  Fatty acid biosynthesis
sfv00071  Fatty acid degradation
sfv00130  Ubiquinone and other terpenoid-quinone biosynthesis
sfv00190  Oxidative phosphorylation
sfv00220  Arginine biosynthesis
sfv00230  Purine metabolism
sfv00240  Pyrimidine metabolism
sfv00250  Alanine, aspartate and glutamate metabolism
sfv00260  Glycine, serine and threonine metabolism
sfv00261  Monobactam biosynthesis
sfv00270  Cysteine and methionine metabolism
sfv00280  Valine, leucine and isoleucine degradation
sfv00290  Valine, leucine and isoleucine biosynthesis
sfv00300  Lysine biosynthesis
sfv00310  Lysine degradation
sfv00330  Arginine and proline metabolism
sfv00332  Carbapenem biosynthesis
sfv00340  Histidine metabolism
sfv00350  Tyrosine metabolism
sfv00360  Phenylalanine metabolism
sfv00361  Chlorocyclohexane and chlorobenzene degradation
sfv00362  Benzoate degradation
sfv00364  Fluorobenzoate degradation
sfv00380  Tryptophan metabolism
sfv00400  Phenylalanine, tyrosine and tryptophan biosynthesis
sfv00401  Novobiocin biosynthesis
sfv00410  beta-Alanine metabolism
sfv00430  Taurine and hypotaurine metabolism
sfv00450  Selenocompound metabolism
sfv00460  Cyanoamino acid metabolism
sfv00470  D-Amino acid metabolism
sfv00480  Glutathione metabolism
sfv00500  Starch and sucrose metabolism
sfv00511  Other glycan degradation
sfv00520  Amino sugar and nucleotide sugar metabolism
sfv00521  Streptomycin biosynthesis
sfv00523  Polyketide sugar unit biosynthesis
sfv00525  Acarbose and validamycin biosynthesis
sfv00540  Lipopolysaccharide biosynthesis
sfv00541  O-Antigen nucleotide sugar biosynthesis
sfv00542  O-Antigen repeat unit biosynthesis
sfv00543  Exopolysaccharide biosynthesis
sfv00550  Peptidoglycan biosynthesis
sfv00552  Teichoic acid biosynthesis
sfv00561  Glycerolipid metabolism
sfv00562  Inositol phosphate metabolism
sfv00564  Glycerophospholipid metabolism
sfv00565  Ether lipid metabolism
sfv00592  alpha-Linolenic acid metabolism
sfv00600  Sphingolipid metabolism
sfv00620  Pyruvate metabolism
sfv00623  Toluene degradation
sfv00625  Chloroalkane and chloroalkene degradation
sfv00626  Naphthalene degradation
sfv00630  Glyoxylate and dicarboxylate metabolism
sfv00633  Nitrotoluene degradation
sfv00640  Propanoate metabolism
sfv00650  Butanoate metabolism
sfv00660  C5-Branched dibasic acid metabolism
sfv00670  One carbon pool by folate
sfv00680  Methane metabolism
sfv00730  Thiamine metabolism
sfv00740  Riboflavin metabolism
sfv00750  Vitamin B6 metabolism
sfv00760  Nicotinate and nicotinamide metabolism
sfv00770  Pantothenate and CoA biosynthesis
sfv00780  Biotin metabolism
sfv00785  Lipoic acid metabolism
sfv00790  Folate biosynthesis
sfv00860  Porphyrin metabolism
sfv00900  Terpenoid backbone biosynthesis
sfv00907  Pinene, camphor and geraniol degradation
sfv00910  Nitrogen metabolism
sfv00920  Sulfur metabolism
sfv00930  Caprolactam degradation
sfv00946  Degradation of flavonoids
sfv00997  Biosynthesis of various other secondary metabolites
sfv00999  Biosynthesis of various plant secondary metabolites
sfv01040  Biosynthesis of unsaturated fatty acids
sfv01053  Biosynthesis of siderophore group nonribosomal peptides
KO pathway
ko01100   
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