KEGG   PATHWAY: sfw03440
Entry
sfw03440                    Pathway                                
Name
Homologous recombination - Serratia fonticola DSM 4576
Description
Homologous recombination (HR) is essential for the accurate repair of DNA double-strand breaks (DSBs), potentially lethal lesions. HR takes place in the late S-G2 phase of the cell cycle and involves the generation of a single-stranded region of DNA, followed by strand invasion, formation of a Holliday junction, DNA synthesis using the intact strand as a template, branch migration and resolution. It is investigated that RecA/Rad51 family proteins play a central role. The breast cancer susceptibility protein Brca2 and the RecQ helicase BLM (Bloom syndrome mutated) are tumor suppressors that maintain genome integrity, at least in part, through HR.
Class
Genetic Information Processing; Replication and repair
Pathway map
sfw03440  Homologous recombination
sfw03440

Other DBs
GO: 0000724
Organism
Serratia fonticola DSM 4576 [GN:sfw]
Gene
WN53_02290  ssDNA exonuclease RecJ [KO:K07462] [EC:3.1.-.-]
WN53_05360  single-stranded DNA-binding protein [KO:K03111]
WN53_08005  recF; recombination protein F [KO:K03629]
WN53_00985  recO; DNA repair protein RecO [KO:K03584]
WN53_14520  recR; recombination protein RecR [KO:K06187]
WN53_13110  recA; recombinase A [KO:K03553]
WN53_07595  DNA polymerase I [KO:K02335] [EC:2.7.7.7]
WN53_22675  ruvA; ATP-dependent DNA helicase RuvA [KO:K03550]
WN53_22670  ruvB; ATP-dependent DNA helicase RuvB [KO:K03551] [EC:5.6.2.4]
WN53_22680  ruvC; Holliday junction resolvase [KO:K01159] [EC:3.1.21.10]
WN53_07480  ATP-dependent DNA helicase RecG [KO:K03655] [EC:5.6.2.4]
WN53_01905  recB; exonuclease V subunit beta [KO:K03582] [EC:3.1.11.5]
WN53_01915  recC; exonuclease V subunit gamma [KO:K03583] [EC:3.1.11.5]
WN53_01900  recD; exonuclease V subunit alpha [KO:K03581] [EC:3.1.11.5]
WN53_01670  dnaE; DNA polymerase III subunit alpha [KO:K02337] [EC:2.7.7.7]
WN53_08000  DNA polymerase III subunit beta [KO:K02338] [EC:2.7.7.7]
WN53_14510  DNA polymerase III subunits gamma and tau [KO:K02343] [EC:2.7.7.7]
WN53_15405  holA; DNA polymerase III subunit delta [KO:K02340] [EC:2.7.7.7]
WN53_19250  DNA polymerase III subunit delta' [KO:K02341] [EC:2.7.7.7]
WN53_13365  DNA polymerase III subunit epsilon [KO:K02342] [EC:2.7.7.7]
WN53_23330  DNA polymerase III subunit theta [KO:K02345] [EC:2.7.7.7]
WN53_24950  DNA polymerase II [KO:K02345] [EC:2.7.7.7]
WN53_11045  DNA polymerase III subunit chi [KO:K02339] [EC:2.7.7.7]
WN53_11555  DNA polymerase III subunit psi [KO:K02344] [EC:2.7.7.7]
WN53_07015  primosome assembly protein PriA [KO:K04066] [EC:5.6.2.4]
WN53_14475  prephenate dehydrogenase [KO:K04067]
Reference
  Authors
Maloisel L, Fabre F, Gangloff S.
  Title
DNA polymerase delta is preferentially recruited during homologous recombination to promote heteroduplex DNA extension.
  Journal
Mol Cell Biol 28:1373-82 (2008)
DOI:10.1128/MCB.01651-07
Reference
  Authors
Haruta-Takahashi N, Iwasaki H.
  Title
[Recombination mediators]
  Journal
Seikagaku 79:449-53 (2007)
Reference
  Authors
Ouyang KJ, Woo LL, Ellis NA.
  Title
Homologous recombination and maintenance of genome integrity: Cancer and aging through the prism of human RecQ helicases.
  Journal
Mech Ageing Dev 129:425-40 (2008)
DOI:10.1016/j.mad.2008.03.003
Reference
  Authors
Kawabata M, Kawabata T, Nishibori M.
  Title
Role of recA/RAD51 family proteins in mammals.
  Journal
Acta Med Okayama 59:1-9 (2005)
DOI:10.18926/AMO/31987
Reference
  Authors
Prado F, Cortes-Ledesma F, Huertas P, Aguilera A.
  Title
Mitotic recombination in Saccharomyces cerevisiae.
  Journal
Curr Genet 42:185-98 (2003)
DOI:10.1007/s00294-002-0346-3
Reference
  Authors
Heyer WD, Li X, Rolfsmeier M, Zhang XP.
  Title
Rad54: the Swiss Army knife of homologous recombination?
  Journal
Nucleic Acids Res 34:4115-25 (2006)
DOI:10.1093/nar/gkl481
Reference
  Authors
Michel B, Boubakri H, Baharoglu Z, LeMasson M, Lestini R.
  Title
Recombination proteins and rescue of arrested replication forks.
  Journal
DNA Repair (Amst) 6:967-80 (2007)
DOI:10.1016/j.dnarep.2007.02.016
KO pathway
ko03440   
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