PATHWAY: she01100 Help Entry she01100                    Pathway                                 Name Metabolic pathways - Shewanella sp. MR-4 Class BRITE hierarchy Pathway map she01100   Metabolic pathways Module she_M00002   Glycolysis, core module involving three-carbon compounds [PATH:she01100] she_M00003   Gluconeogenesis, oxaloacetate => fructose-6P [PATH:she01100] she_M00004   Pentose phosphate pathway (Pentose phosphate cycle) [PATH:she01100] she_M00005   PRPP biosynthesis, ribose 5P => PRPP [PATH:she01100] she_M00006   Pentose phosphate pathway, oxidative phase, glucose 6P => ribulose 5P [PATH:she01100] she_M00007   Pentose phosphate pathway, non-oxidative phase, fructose 6P => ribose 5P [PATH:she01100] she_M00008   Entner-Doudoroff pathway, glucose-6P => glyceraldehyde-3P + pyruvate [PATH:she01100] she_M00009   Citrate cycle (TCA cycle, Krebs cycle) [PATH:she01100] she_M00010   Citrate cycle, first carbon oxidation, oxaloacetate => 2-oxoglutarate [PATH:she01100] she_M00011   Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate [PATH:she01100] she_M00012   Glyoxylate cycle [PATH:she01100] she_M00015   Proline biosynthesis, glutamate => proline [PATH:she01100] she_M00016   Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine [PATH:she01100] she_M00017   Methionine biosynthesis, aspartate => homoserine => methionine [PATH:she01100] she_M00018   Threonine biosynthesis, aspartate => homoserine => threonine [PATH:she01100] she_M00019   Valine/isoleucine biosynthesis, pyruvate => valine / 2-oxobutanoate => isoleucine [PATH:she01100] she_M00020   Serine biosynthesis, glycerate-3P => serine [PATH:she01100] she_M00021   Cysteine biosynthesis, serine => cysteine [PATH:she01100] she_M00022   Shikimate pathway, phosphoenolpyruvate + erythrose-4P => chorismate [PATH:she01100] she_M00023   Tryptophan biosynthesis, chorismate => tryptophan [PATH:she01100] she_M00024   Phenylalanine biosynthesis, chorismate => phenylpyruvate => phenylalanine [PATH:she01100] she_M00025   Tyrosine biosynthesis, chorismate => HPP => tyrosine [PATH:she01100] she_M00026   Histidine biosynthesis, PRPP => histidine [PATH:she01100] she_M00036   Leucine degradation, leucine => acetoacetate + acetyl-CoA [PATH:she01100] she_M00044   Tyrosine degradation, tyrosine => homogentisate [PATH:she01100] she_M00045   Histidine degradation, histidine => N-formiminoglutamate => glutamate [PATH:she01100] she_M00048   De novo purine biosynthesis, PRPP + glutamine => IMP [PATH:she01100] she_M00049   Adenine ribonucleotide biosynthesis, IMP => ADP,ATP [PATH:she01100] she_M00050   Guanine ribonucleotide biosynthesis, IMP => GDP,GTP [PATH:she01100] she_M00052   Pyrimidine ribonucleotide biosynthesis, UMP => UDP/UTP,CDP/CTP [PATH:she01100] she_M00053   Deoxyribonucleotide biosynthesis, ADP/GDP/CDP/UDP => dATP/dGTP/dCTP/dUTP [PATH:she01100] she_M00060   KDO2-lipid A biosynthesis, Raetz pathway, LpxL-LpxM type [PATH:she01100] she_M00063   CMP-KDO biosynthesis [PATH:she01100] she_M00083   Fatty acid biosynthesis, elongation [PATH:she01100] she_M00086   beta-Oxidation, acyl-CoA synthesis [PATH:she01100] she_M00087   beta-Oxidation [PATH:she01100] she_M00093   Phosphatidylethanolamine (PE) biosynthesis, PA => PS => PE [PATH:she01100] she_M00115   NAD biosynthesis, aspartate => quinolinate => NAD [PATH:she01100] she_M00116   Menaquinone biosynthesis, chorismate (+ polyprenyl-PP) => menaquinol [PATH:she01100] she_M00117   Ubiquinone biosynthesis, prokaryotes, chorismate (+ polyprenyl-PP) => ubiquinol [PATH:she01100] she_M00118   Glutathione biosynthesis, glutamate => glutathione [PATH:she01100] she_M00120   Coenzyme A biosynthesis, pantothenate => CoA [PATH:she01100] she_M00121   Heme biosynthesis, plants and bacteria, glutamate => heme [PATH:she01100] she_M00122   Cobalamin biosynthesis, cobyrinate a,c-diamide => cobalamin [PATH:she01100] she_M00123   Biotin biosynthesis, pimeloyl-ACP/CoA => biotin [PATH:she01100] she_M00124   Pyridoxal-P biosynthesis, erythrose-4P => pyridoxal-P [PATH:she01100] she_M00125   Riboflavin biosynthesis, plants and bacteria, GTP => riboflavin/FMN/FAD [PATH:she01100] she_M00126   Tetrahydrofolate biosynthesis, GTP => THF [PATH:she01100] she_M00127   Thiamine biosynthesis, prokaryotes, AIR (+ DXP/tyrosine) => TMP/TPP [PATH:she01100] she_M00140   C1-unit interconversion, prokaryotes [PATH:she01100] she_M00149   Succinate dehydrogenase, prokaryotes [PATH:she01100] she_M00151   Cytochrome bc1 complex respiratory unit [PATH:she01100] she_M00155   Cytochrome c oxidase, prokaryotes [PATH:she01100] she_M00156   Cytochrome c oxidase, cbb3-type [PATH:she01100] she_M00157   F-type ATPase, prokaryotes and chloroplasts [PATH:she01100] she_M00168   CAM (Crassulacean acid metabolism), dark [PATH:she01100] she_M00176   Assimilatory sulfate reduction, sulfate => H2S [PATH:she01100] she_M00307   Pyruvate oxidation, pyruvate => acetyl-CoA [PATH:she01100] she_M00417   Cytochrome o ubiquinol oxidase [PATH:she01100] she_M00432   Leucine biosynthesis, 2-oxoisovalerate => 2-oxoisocaproate [PATH:she01100] she_M00570   Isoleucine biosynthesis, threonine => 2-oxobutanoate => isoleucine [PATH:she01100] she_M00579   Phosphate acetyltransferase-acetate kinase pathway, acetyl-CoA => acetate [PATH:she01100] she_M00621   Glycine cleavage system [PATH:she01100] she_M00793   dTDP-L-rhamnose biosynthesis [PATH:she01100] she_M00844   Arginine biosynthesis, ornithine => arginine [PATH:she01100] she_M00854   Glycogen biosynthesis, glucose-1P => glycogen/starch [PATH:she01100] she_M00880   Molybdenum cofactor biosynthesis, GTP => molybdenum cofactor [PATH:she01100] she_M00881   Lipoic acid biosynthesis, plants and bacteria, octanoyl-ACP => dihydrolipoyl-E2/H [PATH:she01100] she_M00938   Pyrimidine deoxyribonucleotide biosynthesis, UDP => dTTP [PATH:she01100] she_M00970   Proline degradation, proline => glutamate [PATH:she01100] Organism Shewanella sp. MR-4 [GN:she] Related pathway she00010   Glycolysis / Gluconeogenesis she00020   Citrate cycle (TCA cycle) she00030   Pentose phosphate pathway she00040   Pentose and glucuronate interconversions she00051   Fructose and mannose metabolism she00052   Galactose metabolism she00053   Ascorbate and aldarate metabolism she00061   Fatty acid biosynthesis she00071   Fatty acid degradation she00130   Ubiquinone and other terpenoid-quinone biosynthesis she00190   Oxidative phosphorylation she00220   Arginine biosynthesis she00230   Purine metabolism she00240   Pyrimidine metabolism she00250   Alanine, aspartate and glutamate metabolism she00260   Glycine, serine and threonine metabolism she00261   Monobactam biosynthesis she00270   Cysteine and methionine metabolism she00280   Valine, leucine and isoleucine degradation she00290   Valine, leucine and isoleucine biosynthesis she00300   Lysine biosynthesis she00310   Lysine degradation she00330   Arginine and proline metabolism she00332   Carbapenem biosynthesis she00340   Histidine metabolism she00350   Tyrosine metabolism she00360   Phenylalanine metabolism she00361   Chlorocyclohexane and chlorobenzene degradation she00362   Benzoate degradation she00364   Fluorobenzoate degradation she00380   Tryptophan metabolism she00400   Phenylalanine, tyrosine and tryptophan biosynthesis she00401   Novobiocin biosynthesis she00410   beta-Alanine metabolism she00430   Taurine and hypotaurine metabolism she00450   Selenocompound metabolism she00460   Cyanoamino acid metabolism she00470   D-Amino acid metabolism she00480   Glutathione metabolism she00500   Starch and sucrose metabolism she00511   Other glycan degradation she00520   Amino sugar and nucleotide sugar metabolism she00521   Streptomycin biosynthesis she00523   Polyketide sugar unit biosynthesis she00525   Acarbose and validamycin biosynthesis she00540   Lipopolysaccharide biosynthesis she00541   O-Antigen nucleotide sugar biosynthesis she00542   O-Antigen repeat unit biosynthesis she00543   Exopolysaccharide biosynthesis she00550   Peptidoglycan biosynthesis she00552   Teichoic acid biosynthesis she00561   Glycerolipid metabolism she00562   Inositol phosphate metabolism she00564   Glycerophospholipid metabolism she00565   Ether lipid metabolism she00590   Arachidonic acid metabolism she00592   alpha-Linolenic acid metabolism she00600   Sphingolipid metabolism she00620   Pyruvate metabolism she00623   Toluene degradation she00625   Chloroalkane and chloroalkene degradation she00626   Naphthalene degradation she00627   Aminobenzoate degradation she00630   Glyoxylate and dicarboxylate metabolism she00633   Nitrotoluene degradation she00640   Propanoate metabolism she00643   Styrene degradation she00650   Butanoate metabolism she00660   C5-Branched dibasic acid metabolism she00670   One carbon pool by folate she00680   Methane metabolism she00730   Thiamine metabolism she00740   Riboflavin metabolism she00750   Vitamin B6 metabolism she00760   Nicotinate and nicotinamide metabolism she00770   Pantothenate and CoA biosynthesis she00780   Biotin metabolism she00785   Lipoic acid metabolism she00790   Folate biosynthesis she00860   Porphyrin metabolism she00900   Terpenoid backbone biosynthesis she00903   Limonene degradation she00907   Pinene, camphor and geraniol degradation she00910   Nitrogen metabolism she00920   Sulfur metabolism she00930   Caprolactam degradation she00999   Biosynthesis of various plant secondary metabolites she01040   Biosynthesis of unsaturated fatty acids KO pathway ko01100     LinkDB All DBs

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