KEGG   PATHWAY: shl00010
Entry
shl00010                    Pathway                                
Name
Glycolysis / Gluconeogenesis - Shewanella halifaxensis
Description
Glycolysis is the process of converting glucose into pyruvate and generating small amounts of ATP (energy) and NADH (reducing power). It is a central pathway that produces important precursor metabolites: six-carbon compounds of glucose-6P and fructose-6P and three-carbon compounds of glycerone-P, glyceraldehyde-3P, glycerate-3P, phosphoenolpyruvate, and pyruvate [MD:M00001]. Acetyl-CoA, another important precursor metabolite, is produced by oxidative decarboxylation of pyruvate [MD:M00307]. When the enzyme genes of this pathway are examined in completely sequenced genomes, the reaction steps of three-carbon compounds from glycerone-P to pyruvate form a conserved core module [MD:M00002], which is found in almost all organisms and which sometimes contains operon structures in bacterial genomes. Gluconeogenesis is a synthesis pathway of glucose from noncarbohydrate precursors. It is essentially a reversal of glycolysis with minor variations of alternative paths [MD:M00003].
Class
Metabolism; Carbohydrate metabolism
Pathway map
shl00010  Glycolysis / Gluconeogenesis
shl00010

Module
shl_M00002  Glycolysis, core module involving three-carbon compounds [PATH:shl00010]
shl_M00003  Gluconeogenesis, oxaloacetate => fructose-6P [PATH:shl00010]
shl_M00307  Pyruvate oxidation, pyruvate => acetyl-CoA [PATH:shl00010]
Other DBs
GO: 0006096 0006094
Organism
Shewanella halifaxensis [GN:shl]
Gene
Shal_1121  Glucose-6-phosphate isomerase [KO:K01810] [EC:5.3.1.9]
Shal_0784  Inositol phosphatase/fructose-16-bisphosphatase [KO:K03841] [EC:3.1.3.11]
Shal_0847  fructose-bisphosphate aldolase, class II, Calvin cycle subtype [KO:K01624] [EC:4.1.2.13]
Shal_3151  Triose-phosphate isomerase [KO:K01803] [EC:5.3.1.1]
Shal_2076  glyceraldehyde-3-phosphate dehydrogenase, type I [KO:K00134] [EC:1.2.1.12]
Shal_2078  glyceraldehyde-3-phosphate dehydrogenase, type I [KO:K00134] [EC:1.2.1.12]
Shal_0846  Phosphoglycerate kinase [KO:K00927] [EC:2.7.2.3]
Shal_0043  phosphoglycerate mutase, 2,3-bisphosphoglycerate-independent [KO:K15633] [EC:5.4.2.12]
Shal_1222  Phosphopyruvate hydratase [KO:K01689] [EC:4.2.1.11]
Shal_1947  pyruvate kinase [KO:K00873] [EC:2.7.1.40]
Shal_1705  phosphoenolpyruvate synthase [KO:K01007] [EC:2.7.9.2]
Shal_0476  2-oxo-acid dehydrogenase E1 subunit, homodimeric type [KO:K00163] [EC:1.2.4.1]
Shal_0477  pyruvate dehydrogenase complex dihydrolipoamide acetyltransferase [KO:K00627] [EC:2.3.1.12]
Shal_0478  dihydrolipoamide dehydrogenase [KO:K00382] [EC:1.8.1.4]
Shal_0641  pyruvate flavodoxin/ferredoxin oxidoreductase domain protein [KO:K03737] [EC:1.2.7.1 1.2.7.-]
Shal_3111  Alcohol dehydrogenase class III/S-(hydroxymethyl)glutathione dehydrogenase [KO:K00121] [EC:1.1.1.284 1.1.1.1]
Shal_4033  Alcohol dehydrogenase class III/S-(hydroxymethyl)glutathione dehydrogenase [KO:K00121] [EC:1.1.1.284 1.1.1.1]
Shal_2250  iron-containing alcohol dehydrogenase [KO:K04072] [EC:1.2.1.10 1.1.1.1]
Shal_1196  iron-containing alcohol dehydrogenase [KO:K13954] [EC:1.1.1.1]
Shal_0083  iron-containing alcohol dehydrogenase [KO:K13954] [EC:1.1.1.1]
Shal_4036  iron-containing alcohol dehydrogenase [KO:K13954] [EC:1.1.1.1]
Shal_0328  aldehyde dehydrogenase [KO:K00138] [EC:1.2.1.-]
Shal_1697  acetate--CoA ligase [KO:K01895] [EC:6.2.1.1]
Shal_0664  Aldose 1-epimerase [KO:K01785] [EC:5.1.3.3]
Shal_2238  phosphoglucomutase, alpha-D-glucose phosphate-specific [KO:K01835] [EC:5.4.2.2]
Shal_2435  Aldose 1-epimerase [KO:K01792] [EC:5.1.3.15]
Shal_4178  Phosphoenolpyruvate carboxykinase (ATP) [KO:K01610] [EC:4.1.1.49]
Shal_2308  PTS system, glucose subfamily, IIA subunit [KO:K02777] [EC:2.7.1.-]
Compound
C00022  Pyruvate
C00024  Acetyl-CoA
C00031  D-Glucose
C00033  Acetate
C00036  Oxaloacetate
C00068  Thiamin diphosphate
C00074  Phosphoenolpyruvate
C00084  Acetaldehyde
C00085  D-Fructose 6-phosphate
C00103  D-Glucose 1-phosphate
C00111  Glycerone phosphate
C00118  D-Glyceraldehyde 3-phosphate
C00186  (S)-Lactate
C00197  3-Phospho-D-glycerate
C00221  beta-D-Glucose
C00236  3-Phospho-D-glyceroyl phosphate
C00267  alpha-D-Glucose
C00354  D-Fructose 1,6-bisphosphate
C00469  Ethanol
C00631  2-Phospho-D-glycerate
C00668  alpha-D-Glucose 6-phosphate
C01159  2,3-Bisphospho-D-glycerate
C01172  beta-D-Glucose 6-phosphate
C01451  Salicin
C05125  2-(alpha-Hydroxyethyl)thiamine diphosphate
C06186  Arbutin
C06187  Arbutin 6-phosphate
C06188  Salicin 6-phosphate
C15972  Enzyme N6-(lipoyl)lysine
C15973  Enzyme N6-(dihydrolipoyl)lysine
C16255  [Dihydrolipoyllysine-residue acetyltransferase] S-acetyldihydrolipoyllysine
Reference
  Authors
Nishizuka Y (ed).
  Title
[Metabolic Maps] (In Japanese)
  Journal
Tokyo Kagaku Dojin (1980)
Reference
  Authors
Nishizuka Y, Seyama Y, Ikai A, Ishimura Y, Kawaguchi A (eds).
  Title
[Cellular Functions and Metabolic Maps] (In Japanese)
  Journal
Tokyo Kagaku Dojin (1997)
Reference
  Authors
Michal G.
  Title
Biochemical Pathways
  Journal
Wiley (1999)
Related
pathway
shl00020  Citrate cycle (TCA cycle)
shl00030  Pentose phosphate pathway
shl00500  Starch and sucrose metabolism
shl00620  Pyruvate metabolism
shl00640  Propanoate metabolism
shl00710  Carbon fixation by Calvin cycle
KO pathway
ko00010   
LinkDB

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