KEGG   PATHWAY: shom00010
Entry
shom00010                   Pathway                                
Name
Glycolysis / Gluconeogenesis - Staphylococcus hominis
Description
Glycolysis is the process of converting glucose into pyruvate and generating small amounts of ATP (energy) and NADH (reducing power). It is a central pathway that produces important precursor metabolites: six-carbon compounds of glucose-6P and fructose-6P and three-carbon compounds of glycerone-P, glyceraldehyde-3P, glycerate-3P, phosphoenolpyruvate, and pyruvate [MD:M00001]. Acetyl-CoA, another important precursor metabolite, is produced by oxidative decarboxylation of pyruvate [MD:M00307]. When the enzyme genes of this pathway are examined in completely sequenced genomes, the reaction steps of three-carbon compounds from glycerone-P to pyruvate form a conserved core module [MD:M00002], which is found in almost all organisms and which sometimes contains operon structures in bacterial genomes. Gluconeogenesis is a synthesis pathway of glucose from noncarbohydrate precursors. It is essentially a reversal of glycolysis with minor variations of alternative paths [MD:M00003].
Class
Metabolism; Carbohydrate metabolism
Pathway map
shom00010  Glycolysis / Gluconeogenesis
shom00010

Module
shom_M00001  Glycolysis (Embden-Meyerhof pathway), glucose => pyruvate [PATH:shom00010]
shom_M00002  Glycolysis, core module involving three-carbon compounds [PATH:shom00010]
shom_M00003  Gluconeogenesis, oxaloacetate => fructose-6P [PATH:shom00010]
shom_M00307  Pyruvate oxidation, pyruvate => acetyl-CoA [PATH:shom00010]
Other DBs
GO: 0006096 0006094
Organism
Staphylococcus hominis [GN:shom]
Gene
EGX58_10265  ROK family glucokinase [KO:K25026] [EC:2.7.1.2]
EGX58_02010  glucose-6-phosphate isomerase [KO:K01810] [EC:5.3.1.9]
EGX58_09585  pfkA; 6-phosphofructokinase [KO:K00850] [EC:2.7.1.11]
EGX58_06340  fructose-1,6-bisphosphatase [KO:K04041] [EC:3.1.3.11]
EGX58_05920  fructose bisphosphate aldolase [KO:K01623] [EC:4.1.2.13]
EGX58_08000  fructose-bisphosphate aldolase [KO:K01624] [EC:4.1.2.13]
EGX58_02400  triose-phosphate isomerase [KO:K01803] [EC:5.3.1.1]
EGX58_02410  gap; type I glyceraldehyde-3-phosphate dehydrogenase [KO:K00134] [EC:1.2.1.12]
EGX58_09635  gap; type I glyceraldehyde-3-phosphate dehydrogenase [KO:K00150] [EC:1.2.1.59]
EGX58_02405  pgk; phosphoglycerate kinase [KO:K00927] [EC:2.7.2.3]
EGX58_06655  phosphoglycerate mutase [KO:K01834] [EC:5.4.2.11]
EGX58_04200  histidine phosphatase family protein [KO:K01834] [EC:5.4.2.11]
EGX58_02395  2,3-bisphosphoglycerate-independent phosphoglycerate mutase [KO:K15633] [EC:5.4.2.12]
EGX58_02390  phosphopyruvate hydratase [KO:K01689] [EC:4.2.1.11]
EGX58_09590  pyk; pyruvate kinase [KO:K00873] [EC:2.7.1.40]
EGX58_05905  pyruvate, phosphate dikinase [KO:K01006] [EC:2.7.9.1]
EGX58_01230  pdhA; pyruvate dehydrogenase (acetyl-transferring) E1 component subunit alpha [KO:K00161] [EC:1.2.4.1]
EGX58_01225  alpha-ketoacid dehydrogenase subunit beta [KO:K00162] [EC:1.2.4.1]
EGX58_05025  2-oxo acid dehydrogenase subunit E2 [KO:K00627] [EC:2.3.1.12]
EGX58_01220  2-oxo acid dehydrogenase subunit E2 [KO:K00627] [EC:2.3.1.12]
EGX58_10405  lpdA; dihydrolipoyl dehydrogenase [KO:K00382] [EC:1.8.1.4]
EGX58_05010  lpdA; dihydrolipoyl dehydrogenase [KO:K00382] [EC:1.8.1.4]
EGX58_01215  lpdA; dihydrolipoyl dehydrogenase [KO:K00382] [EC:1.8.1.4]
EGX58_00340  2-oxoacid:acceptor oxidoreductase subunit alpha [KO:K00174] [EC:1.2.7.3 1.2.7.11]
EGX58_00335  2-oxoacid:ferredoxin oxidoreductase subunit beta [KO:K00175] [EC:1.2.7.3 1.2.7.11]
EGX58_06210  L-lactate dehydrogenase [KO:K00016] [EC:1.1.1.27]
EGX58_04730  glutathione-dependent formaldehyde dehydrogenase [KO:K00121] [EC:1.1.1.284 1.1.1.1]
EGX58_04740  NAD(P)-dependent alcohol dehydrogenase [KO:K13979] [EC:1.1.1.2]
EGX58_06300  aldehyde dehydrogenase family protein [KO:K00128] [EC:1.2.1.3]
EGX58_08015  aldehyde dehydrogenase family protein [KO:K00128] [EC:1.2.1.3]
EGX58_05900  acyl--CoA ligase [KO:K01895] [EC:6.2.1.1]
EGX58_07130  galactose mutarotase [KO:K01785] [EC:5.1.3.3]
EGX58_05340  phospho-sugar mutase [KO:K01835] [EC:5.4.2.2]
EGX58_09190  pckA; phosphoenolpyruvate carboxykinase (ATP) [KO:K01610] [EC:4.1.1.49]
EGX58_10790  PTS glucose transporter subunit IIA [KO:K02777] [EC:2.7.1.-]
EGX58_06195  PTS glucose transporter subunit IICBA [KO:K20118] [EC:2.7.1.199]
Compound
C00022  Pyruvate
C00024  Acetyl-CoA
C00031  D-Glucose
C00033  Acetate
C00036  Oxaloacetate
C00068  Thiamin diphosphate
C00074  Phosphoenolpyruvate
C00084  Acetaldehyde
C00085  D-Fructose 6-phosphate
C00103  D-Glucose 1-phosphate
C00111  Glycerone phosphate
C00118  D-Glyceraldehyde 3-phosphate
C00186  (S)-Lactate
C00197  3-Phospho-D-glycerate
C00221  beta-D-Glucose
C00236  3-Phospho-D-glyceroyl phosphate
C00267  alpha-D-Glucose
C00354  D-Fructose 1,6-bisphosphate
C00469  Ethanol
C00631  2-Phospho-D-glycerate
C00668  alpha-D-Glucose 6-phosphate
C01159  2,3-Bisphospho-D-glycerate
C01172  beta-D-Glucose 6-phosphate
C01451  Salicin
C05125  2-(alpha-Hydroxyethyl)thiamine diphosphate
C06186  Arbutin
C06187  Arbutin 6-phosphate
C06188  Salicin 6-phosphate
C15972  Enzyme N6-(lipoyl)lysine
C15973  Enzyme N6-(dihydrolipoyl)lysine
C16255  [Dihydrolipoyllysine-residue acetyltransferase] S-acetyldihydrolipoyllysine
Reference
  Authors
Nishizuka Y (ed).
  Title
[Metabolic Maps] (In Japanese)
  Journal
Tokyo Kagaku Dojin (1980)
Reference
  Authors
Nishizuka Y, Seyama Y, Ikai A, Ishimura Y, Kawaguchi A (eds).
  Title
[Cellular Functions and Metabolic Maps] (In Japanese)
  Journal
Tokyo Kagaku Dojin (1997)
Reference
  Authors
Michal G.
  Title
Biochemical Pathways
  Journal
Wiley (1999)
Related
pathway
shom00020  Citrate cycle (TCA cycle)
shom00030  Pentose phosphate pathway
shom00500  Starch and sucrose metabolism
shom00620  Pyruvate metabolism
shom00640  Propanoate metabolism
shom00710  Carbon fixation by Calvin cycle
KO pathway
ko00010   
LinkDB

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