KEGG   PATHWAY: shq00010
Entry
shq00010                    Pathway                                
Name
Glycolysis / Gluconeogenesis - Shigella sp. PAMC 28760
Description
Glycolysis is the process of converting glucose into pyruvate and generating small amounts of ATP (energy) and NADH (reducing power). It is a central pathway that produces important precursor metabolites: six-carbon compounds of glucose-6P and fructose-6P and three-carbon compounds of glycerone-P, glyceraldehyde-3P, glycerate-3P, phosphoenolpyruvate, and pyruvate [MD:M00001]. Acetyl-CoA, another important precursor metabolite, is produced by oxidative decarboxylation of pyruvate [MD:M00307]. When the enzyme genes of this pathway are examined in completely sequenced genomes, the reaction steps of three-carbon compounds from glycerone-P to pyruvate form a conserved core module [MD:M00002], which is found in almost all organisms and which sometimes contains operon structures in bacterial genomes. Gluconeogenesis is a synthesis pathway of glucose from noncarbohydrate precursors. It is essentially a reversal of glycolysis with minor variations of alternative paths [MD:M00003].
Class
Metabolism; Carbohydrate metabolism
Pathway map
shq00010  Glycolysis / Gluconeogenesis
shq00010

Module
shq_M00001  Glycolysis (Embden-Meyerhof pathway), glucose => pyruvate [PATH:shq00010]
shq_M00002  Glycolysis, core module involving three-carbon compounds [PATH:shq00010]
shq_M00003  Gluconeogenesis, oxaloacetate => fructose-6P [PATH:shq00010]
shq_M00307  Pyruvate oxidation, pyruvate => acetyl-CoA [PATH:shq00010]
Other DBs
GO: 0006096 0006094
Organism
Shigella sp. PAMC 28760 [GN:shq]
Gene
A0259_15695  glk; glucokinase [KO:K00845] [EC:2.7.1.2]
A0259_01715  pgi; glucose-6-phosphate isomerase [KO:K01810] [EC:5.3.1.9]
A0259_01155  ATP-dependent 6-phosphofructokinase [KO:K00850] [EC:2.7.1.11]
A0259_12670  6-phosphofructokinase [KO:K16370] [EC:2.7.1.11]
A0259_02810  fructose-bisphosphatase [KO:K03841] [EC:3.1.3.11]
A0259_01200  fructose 1,6-bisphosphatase [KO:K02446] [EC:3.1.3.11]
A0259_18215  fructose 1,6-bisphosphatase [KO:K02446] [EC:3.1.3.11]
A0259_14305  fructose-bisphosphate aldolase [KO:K11645] [EC:4.1.2.13]
A0259_18190  class II fructose-bisphosphate aldolase [KO:K01624] [EC:4.1.2.13]
A0259_01170  triose-phosphate isomerase [KO:K01803] [EC:5.3.1.1]
A0259_11110  type I glyceraldehyde-3-phosphate dehydrogenase [KO:K00134] [EC:1.2.1.12]
A0259_12965  type I glyceraldehyde-3-phosphate dehydrogenase [KO:K00134] [EC:1.2.1.12]
A0259_18195  phosphoglycerate kinase [KO:K00927] [EC:2.7.2.3]
A0259_07510  gpmA; phosphoglyceromutase [KO:K01834] [EC:5.4.2.11]
A0259_03775  phosphoglycerate mutase [KO:K15634] [EC:5.4.2.11]
A0259_21930  2,3-bisphosphoglycerate-independent phosphoglycerate mutase [KO:K15633] [EC:5.4.2.12]
A0259_17465  eno; phosphopyruvate hydratase [KO:K01689] [EC:4.2.1.11]
A0259_13395  pyruvate kinase [KO:K00873] [EC:2.7.1.40]
A0259_12420  pyruvate kinase [KO:K00873] [EC:2.7.1.40]
A0259_12560  phosphoenolpyruvate synthase [KO:K01007] [EC:2.7.9.2]
A0259_04405  aceE; pyruvate dehydrogenase (acetyl-transferring), homodimeric type [KO:K00163] [EC:1.2.4.1]
A0259_04410  aceF; pyruvate dehydrogenase complex dihydrolipoyllysine-residue acetyltransferase [KO:K00627] [EC:2.3.1.12]
A0259_04415  dihydrolipoyl dehydrogenase [KO:K00382] [EC:1.8.1.4]
A0259_11000  pyruvate:ferredoxin (flavodoxin) oxidoreductase [KO:K03737] [EC:1.2.7.1 1.2.7.-]
A0259_05450  S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase [KO:K00121] [EC:1.1.1.284 1.1.1.1]
A0259_10280  bifunctional acetaldehyde-CoA/alcohol dehydrogenase [KO:K04072] [EC:1.2.1.10 1.1.1.1]
A0259_11440  adhP; zinc-dependent alcohol dehydrogenase [KO:K13953] [EC:1.1.1.1]
A0259_21795  L-threonine dehydrogenase [KO:K13954] [EC:1.1.1.1]
A0259_02990  alcohol dehydrogenase [KO:K12957] [EC:1.1.1.2 1.1.1.183]
A0259_05300  zinc-binding dehydrogenase [KO:K13979] [EC:1.1.1.2]
A0259_15960  ethanolamine utilization protein EutG [KO:K04022]
A0259_21790  aldehyde dehydrogenase [KO:K00138] [EC:1.2.1.-]
A0259_01960  acetyl-coenzyme A synthetase [KO:K01895] [EC:6.2.1.1]
A0259_00950  aldose epimerase [KO:K01785] [EC:5.1.3.3]
A0259_09135  bifunctional glucose-1-phosphatase/inositol phosphatase [KO:K01085] [EC:3.1.3.10]
A0259_00980  glucose-1-phosphatase [KO:K20866] [EC:3.1.3.10]
A0259_07120  phosphoglucomutase, alpha-D-glucose phosphate-specific [KO:K01835] [EC:5.4.2.2]
A0259_12970  D-hexose-6-phosphate mutarotase [KO:K01792] [EC:5.1.3.15]
A0259_20775  phosphoenolpyruvate carboxykinase (ATP) [KO:K01610] [EC:4.1.1.49]
A0259_12725  6-phospho-beta-glucosidase [KO:K01222] [EC:3.2.1.86]
A0259_00070  6-phospho-beta-glucosidase [KO:K01223] [EC:3.2.1.86]
A0259_18070  6-phospho-beta-glucosidase [KO:K01223] [EC:3.2.1.86]
A0259_17175  6-phospho-beta-glucosidase [KO:K01223] [EC:3.2.1.86]
A0259_15825  PTS glucose transporter subunit IIA [KO:K02777] [EC:2.7.1.-]
A0259_09645  PTS glucose-specific subunit IIBC [KO:K02779] [EC:2.7.1.199]
A0259_12130  PTS sugar transporter subunit IIBC [KO:K02791] [EC:2.7.1.199 2.7.1.208]
A0259_17170  PTS cellobiose transporter subunit IIBC [KO:K02753] [EC:2.7.1.-]
Compound
C00022  Pyruvate
C00024  Acetyl-CoA
C00031  D-Glucose
C00033  Acetate
C00036  Oxaloacetate
C00068  Thiamin diphosphate
C00074  Phosphoenolpyruvate
C00084  Acetaldehyde
C00085  D-Fructose 6-phosphate
C00103  D-Glucose 1-phosphate
C00111  Glycerone phosphate
C00118  D-Glyceraldehyde 3-phosphate
C00186  (S)-Lactate
C00197  3-Phospho-D-glycerate
C00221  beta-D-Glucose
C00236  3-Phospho-D-glyceroyl phosphate
C00267  alpha-D-Glucose
C00354  D-Fructose 1,6-bisphosphate
C00469  Ethanol
C00631  2-Phospho-D-glycerate
C00668  alpha-D-Glucose 6-phosphate
C01159  2,3-Bisphospho-D-glycerate
C01172  beta-D-Glucose 6-phosphate
C01451  Salicin
C05125  2-(alpha-Hydroxyethyl)thiamine diphosphate
C06186  Arbutin
C06187  Arbutin 6-phosphate
C06188  Salicin 6-phosphate
C15972  Enzyme N6-(lipoyl)lysine
C15973  Enzyme N6-(dihydrolipoyl)lysine
C16255  [Dihydrolipoyllysine-residue acetyltransferase] S-acetyldihydrolipoyllysine
Reference
  Authors
Nishizuka Y (ed).
  Title
[Metabolic Maps] (In Japanese)
  Journal
Tokyo Kagaku Dojin (1980)
Reference
  Authors
Nishizuka Y, Seyama Y, Ikai A, Ishimura Y, Kawaguchi A (eds).
  Title
[Cellular Functions and Metabolic Maps] (In Japanese)
  Journal
Tokyo Kagaku Dojin (1997)
Reference
  Authors
Michal G.
  Title
Biochemical Pathways
  Journal
Wiley (1999)
Related
pathway
shq00020  Citrate cycle (TCA cycle)
shq00030  Pentose phosphate pathway
shq00500  Starch and sucrose metabolism
shq00620  Pyruvate metabolism
shq00640  Propanoate metabolism
KO pathway
ko00010   
LinkDB

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