KEGG   PATHWAY: sita00940
Entry
sita00940                   Pathway                                
Name
Phenylpropanoid biosynthesis - Setaria italica (foxtail millet)
Description
Phenylpropanoids are a group of plant secondary metabolites derived from phenylalanine and having a wide variety of functions both as structural and signaling molecules. Phenylalanine is first converted to cinnamic acid by deamination. It is followed by hydroxylation and frequent methylation to generate coumaric acid and other acids with a phenylpropane (C6-C3) unit. Reduction of the CoA-activated carboxyl groups of these acids results in the corresponding aldehydes and alcohols. The alcohols are called monolignols, the starting compounds for biosynthesis of lignin.
Class
Metabolism; Biosynthesis of other secondary metabolites
Pathway map
sita00940  Phenylpropanoid biosynthesis
sita00940

Module
sita_M00039  Monolignol biosynthesis, phenylalanine/tyrosine => monolignol [PATH:sita00940]
sita_M00137  Flavanone biosynthesis, phenylalanine => naringenin [PATH:sita00940]
Other DBs
GO: 0009699
Organism
Setaria italica (foxtail millet) [GN:sita]
Gene
101756700  phenylalanine ammonia-lyase [KO:K10775] [EC:4.3.1.24]
101780720  phenylalanine ammonia-lyase [KO:K10775] [EC:4.3.1.24]
101781123  phenylalanine ammonia-lyase [KO:K10775] [EC:4.3.1.24]
101781518  phenylalanine ammonia-lyase [KO:K10775] [EC:4.3.1.24]
101781925  phenylalanine ammonia-lyase [KO:K10775] [EC:4.3.1.24]
101756300  phenylalanine ammonia-lyase [KO:K13064] [EC:4.3.1.25]
101780319  phenylalanine/tyrosine ammonia-lyase [KO:K13064] [EC:4.3.1.25]
101766005  phenylalanine/tyrosine ammonia-lyase [KO:K13064] [EC:4.3.1.25]
101773281  LOW QUALITY PROTEIN: cytochrome P450 CYP73A100-like [KO:K00487] [EC:1.14.14.91]
101768416  trans-cinnamate 4-monooxygenase [KO:K00487] [EC:1.14.14.91]
101762300  probable 4-coumarate--CoA ligase 4 [KO:K01904] [EC:6.2.1.12]
101764384  probable 4-coumarate--CoA ligase 5 [KO:K01904] [EC:6.2.1.12]
101769243  probable 4-coumarate--CoA ligase 3 [KO:K01904] [EC:6.2.1.12]
101766826  probable 4-coumarate--CoA ligase 2 [KO:K01904] [EC:6.2.1.12]
101776259  probable 4-coumarate--CoA ligase 1 [KO:K01904] [EC:6.2.1.12]
101770138  4-coumarate--CoA ligase-like 1 [KO:K01904] [EC:6.2.1.12]
101775054  4-coumarate--CoA ligase-like 9 [KO:K01904] [EC:6.2.1.12]
101781746  4-coumarate--CoA ligase-like 1 isoform X1 [KO:K01904] [EC:6.2.1.12]
101757683  4-coumarate--CoA ligase-like 3 [KO:K01904] [EC:6.2.1.12]
101776596  4-coumarate--CoA ligase-like 7 isoform X1 [KO:K01904] [EC:6.2.1.12]
101769729  4-coumarate--CoA ligase-like 1 [KO:K01904] [EC:6.2.1.12]
101781346  4-coumarate--CoA ligase-like 1 [KO:K01904] [EC:6.2.1.12]
101780161  4-coumarate--CoA ligase-like 5 [KO:K01904] [EC:6.2.1.12]
101773471  4-coumarate--CoA ligase-like 7 isoform X1 [KO:K01904] [EC:6.2.1.12]
101776033  4-coumarate--CoA ligase-like 7 isoform X1 [KO:K01904] [EC:6.2.1.12]
101774168  4-coumarate--CoA ligase-like 7 [KO:K01904] [EC:6.2.1.12]
101772973  putrescine hydroxycinnamoyltransferase 1 [KO:K13065] [EC:2.3.1.133]
101777158  hydroxycinnamoyltransferase 4 [KO:K13065] [EC:2.3.1.133]
101777570  hydroxycinnamoyltransferase 4 [KO:K13065] [EC:2.3.1.133]
101778785  putrescine hydroxycinnamoyltransferase 1-like [KO:K13065] [EC:2.3.1.133]
101760763  hydroxycinnamoyltransferase 4 [KO:K13065] [EC:2.3.1.133]
101761166  putrescine hydroxycinnamoyltransferase 1 [KO:K13065] [EC:2.3.1.133]
101753438  putrescine hydroxycinnamoyltransferase 1 [KO:K13065] [EC:2.3.1.133]
101755357  hydroxycinnamoyltransferase 4 [KO:K13065] [EC:2.3.1.133]
101766579  putrescine hydroxycinnamoyltransferase 1 [KO:K13065] [EC:2.3.1.133]
101772566  putrescine hydroxycinnamoyltransferase 1 [KO:K13065] [EC:2.3.1.133]
101778570  LOW QUALITY PROTEIN: putrescine hydroxycinnamoyltransferase 1-like [KO:K13065] [EC:2.3.1.133]
101771055  cytochrome P450 98A1 [KO:K09754] [EC:1.14.14.96]
101771318  caffeoylshikimate esterase isoform X1 [KO:K18368] [EC:3.1.1.-]
101784571  caffeoylshikimate esterase [KO:K18368] [EC:3.1.1.-]
101779250  caffeoylshikimate esterase isoform X1 [KO:K18368] [EC:3.1.1.-]
101779820  caffeoylshikimate esterase [KO:K18368] [EC:3.1.1.-]
101782364  caffeoylshikimate esterase isoform X1 [KO:K18368] [EC:3.1.1.-]
101756363  caffeoylshikimate esterase [KO:K18368] [EC:3.1.1.-]
101766943  caffeoylshikimate esterase [KO:K18368] [EC:3.1.1.-]
101784306  caffeoylshikimate esterase [KO:K18368] [EC:3.1.1.-]
101767103  caffeoylshikimate esterase-like [KO:K18368] [EC:3.1.1.-]
101777309  caffeoylshikimate esterase [KO:K18368] [EC:3.1.1.-]
101780609  caffeoyl-CoA O-methyltransferase [KO:K00588] [EC:2.1.1.104]
101755442  cinnamoyl-CoA reductase 2 [KO:K09753] [EC:1.2.1.44]
101785020  cinnamoyl-CoA reductase 1 [KO:K09753] [EC:1.2.1.44]
101756000  cinnamoyl-CoA reductase 1 [KO:K09753] [EC:1.2.1.44]
101756805  cinnamoyl-CoA reductase 1 [KO:K09753] [EC:1.2.1.44]
101757221  cinnamoyl-CoA reductase 1 [KO:K09753] [EC:1.2.1.44]
101761894  cinnamoyl-CoA reductase 1 [KO:K09753] [EC:1.2.1.44]
101784783  cinnamoyl-CoA reductase 2 [KO:K09753] [EC:1.2.1.44]
101763396  cinnamoyl-CoA reductase 1 [KO:K09753] [EC:1.2.1.44]
101779528  cinnamoyl-CoA reductase 1 [KO:K09753] [EC:1.2.1.44]
101782962  aldehyde dehydrogenase family 2 member C4 [KO:K12355] [EC:1.2.1.68]
101753824  aldehyde dehydrogenase family 2 member C4 [KO:K12355] [EC:1.2.1.68]
101786865  aldehyde dehydrogenase family 2 member C4 isoform X1 [KO:K12355] [EC:1.2.1.68]
101770139  cytochrome P450 84A1 [KO:K09755] [EC:1.14.-.-]
101765311  caffeic acid 3-O-methyltransferase [KO:K13066] [EC:2.1.1.68 2.1.1.4]
101781334  LOW QUALITY PROTEIN: probable cinnamyl alcohol dehydrogenase 1 [KO:K00083] [EC:1.1.1.195]
101769241  probable cinnamyl alcohol dehydrogenase [KO:K00083] [EC:1.1.1.195]
101774322  cinnamyl alcohol dehydrogenase 2 [KO:K00083] [EC:1.1.1.195]
101776008  probable cinnamyl alcohol dehydrogenase 6 [KO:K00083] [EC:1.1.1.195]
101786111  probable cinnamyl alcohol dehydrogenase 6 [KO:K00083] [EC:1.1.1.195]
101782190  probable cinnamyl alcohol dehydrogenase 5 [KO:K00083] [EC:1.1.1.195]
101774546  cinnamyl alcohol dehydrogenase 7 [KO:K00083] [EC:1.1.1.195]
101758441  probable cinnamyl alcohol dehydrogenase 8D [KO:K00083] [EC:1.1.1.195]
101756145  probable cinnamyl alcohol dehydrogenase 8D [KO:K00083] [EC:1.1.1.195]
101756551  probable cinnamyl alcohol dehydrogenase 8D [KO:K00083] [EC:1.1.1.195]
101757369  probable cinnamyl alcohol dehydrogenase 8D [KO:K00083] [EC:1.1.1.195]
101757638  1-Cys peroxiredoxin PER1 [KO:K11188] [EC:1.11.1.7 1.11.1.27 3.1.1.-]
101758277  peroxidase 52 [KO:K00430] [EC:1.11.1.7]
101779763  peroxidase 2 [KO:K00430] [EC:1.11.1.7]
101760193  peroxidase 31 [KO:K00430] [EC:1.11.1.7]
101768840  cationic peroxidase 1 [KO:K00430] [EC:1.11.1.7]
101766856  peroxidase 5 [KO:K00430] [EC:1.11.1.7]
101765346  peroxidase 5 [KO:K00430] [EC:1.11.1.7]
101766030  peroxidase 5 [KO:K00430] [EC:1.11.1.7]
101786185  peroxidase P7 [KO:K00430] [EC:1.11.1.7]
101760583  peroxidase 39 [KO:K00430] [EC:1.11.1.7]
101779806  peroxidase 4 [KO:K00430] [EC:1.11.1.7]
101757067  peroxidase 70 [KO:K00430] [EC:1.11.1.7]
101783109  peroxidase P7 [KO:K00430] [EC:1.11.1.7]
101757720  peroxidase 5 [KO:K00430] [EC:1.11.1.7]
101758359  peroxidase 51 [KO:K00430] [EC:1.11.1.7]
101763748  peroxidase 5 [KO:K00430] [EC:1.11.1.7]
101764555  peroxidase 5 [KO:K00430] [EC:1.11.1.7]
101756531  peroxidase 5 [KO:K00430] [EC:1.11.1.7]
101758680  peroxidase P7 [KO:K00430] [EC:1.11.1.7]
101760480  peroxidase 2 [KO:K00430] [EC:1.11.1.7]
101778334  peroxidase 2-like isoform X1 [KO:K00430] [EC:1.11.1.7]
101758209  peroxidase 2 [KO:K00430] [EC:1.11.1.7]
101779898  peroxidase 1-like [KO:K00430] [EC:1.11.1.7]
101780714  peroxidase 5 [KO:K00430] [EC:1.11.1.7]
101759739  peroxidase P7 [KO:K00430] [EC:1.11.1.7]
101786325  peroxidase P7 [KO:K00430] [EC:1.11.1.7]
101786716  peroxidase P7 [KO:K00430] [EC:1.11.1.7]
101783171  peroxidase 17 [KO:K00430] [EC:1.11.1.7]
101782224  peroxidase 7 [KO:K00430] [EC:1.11.1.7]
101775750  peroxidase 70 [KO:K00430] [EC:1.11.1.7]
101758864  peroxidase 2 [KO:K00430] [EC:1.11.1.7]
101759264  peroxidase 2 [KO:K00430] [EC:1.11.1.7]
101759673  peroxidase 2 [KO:K00430] [EC:1.11.1.7]
101760077  peroxidase 2 [KO:K00430] [EC:1.11.1.7]
101765212  peroxidase 2 [KO:K00430] [EC:1.11.1.7]
101765618  peroxidase 2 [KO:K00430] [EC:1.11.1.7]
101759025  peroxidase 16 [KO:K00430] [EC:1.11.1.7]
101763346  peroxidase 2 [KO:K00430] [EC:1.11.1.7]
101764149  peroxidase 2 [KO:K00430] [EC:1.11.1.7]
101776457  peroxidase 24-like [KO:K00430] [EC:1.11.1.7]
101779481  peroxidase 31 [KO:K00430] [EC:1.11.1.7]
101759894  peroxidase 72 [KO:K00430] [EC:1.11.1.7]
101774598  peroxidase 16 [KO:K00430] [EC:1.11.1.7]
101774991  peroxidase 45 [KO:K00430] [EC:1.11.1.7]
101775401  peroxidase 45 [KO:K00430] [EC:1.11.1.7]
101775807  peroxidase 45 [KO:K00430] [EC:1.11.1.7]
101775549  peroxidase 2 [KO:K00430] [EC:1.11.1.7]
101775962  peroxidase 2 [KO:K00430] [EC:1.11.1.7]
101776368  peroxidase 5 [KO:K00430] [EC:1.11.1.7]
101757317  peroxidase 1 [KO:K00430] [EC:1.11.1.7]
101761528  peroxidase 47 [KO:K00430] [EC:1.11.1.7]
101771903  peroxidase 1 [KO:K00430] [EC:1.11.1.7]
101753704  peroxidase 1-like [KO:K00430] [EC:1.11.1.7]
101761446  cationic peroxidase 2 [KO:K00430] [EC:1.11.1.7]
101778311  peroxidase 51 [KO:K00430] [EC:1.11.1.7]
101770542  peroxidase 1 [KO:K00430] [EC:1.11.1.7]
101770951  peroxidase 1 [KO:K00430] [EC:1.11.1.7]
101771343  peroxidase 1 [KO:K00430] [EC:1.11.1.7]
101772496  peroxidase 73 [KO:K00430] [EC:1.11.1.7]
101776301  peroxidase 70 [KO:K00430] [EC:1.11.1.7]
101779151  cationic peroxidase 1 [KO:K00430] [EC:1.11.1.7]
101763208  cationic peroxidase SPC4 [KO:K00430] [EC:1.11.1.7]
101763613  cationic peroxidase SPC4 [KO:K00430] [EC:1.11.1.7]
101764017  peroxidase 12-like [KO:K00430] [EC:1.11.1.7]
101764825  cationic peroxidase SPC4 [KO:K00430] [EC:1.11.1.7]
111255652  cationic peroxidase SPC4-like [KO:K00430] [EC:1.11.1.7]
101757149  peroxidase 1 [KO:K00430] [EC:1.11.1.7]
101757536  peroxidase 1 isoform X2 [KO:K00430] [EC:1.11.1.7]
101780248  peroxidase 15 [KO:K00430] [EC:1.11.1.7]
101780647  peroxidase 2 [KO:K00430] [EC:1.11.1.7]
101766751  peroxidase 21 [KO:K00430] [EC:1.11.1.7]
101782290  peroxidase 5 [KO:K00430] [EC:1.11.1.7]
101775109  peroxidase 2 [KO:K00430] [EC:1.11.1.7]
101775512  peroxidase P7 [KO:K00430] [EC:1.11.1.7]
101775928  peroxidase 2 [KO:K00430] [EC:1.11.1.7]
101776333  peroxidase P7 [KO:K00430] [EC:1.11.1.7]
101757192  peroxidase A2 [KO:K00430] [EC:1.11.1.7]
101785533  peroxidase 72 [KO:K00430] [EC:1.11.1.7]
101753695  putative Peroxidase 48 [KO:K00430] [EC:1.11.1.7]
101776237  cationic peroxidase SPC4 [KO:K00430] [EC:1.11.1.7]
101777887  cationic peroxidase SPC4 [KO:K00430] [EC:1.11.1.7]
101778284  cationic peroxidase SPC4 [KO:K00430] [EC:1.11.1.7]
101772567  peroxidase 25 [KO:K00430] [EC:1.11.1.7]
101781049  peroxidase 2 [KO:K00430] [EC:1.11.1.7]
101782279  peroxidase P7 [KO:K00430] [EC:1.11.1.7]
101757315  peroxidase P7 [KO:K00430] [EC:1.11.1.7]
101777590  peroxidase 72 [KO:K00430] [EC:1.11.1.7]
101778009  peroxidase 72 [KO:K00430] [EC:1.11.1.7]
101778405  peroxidase 72 [KO:K00430] [EC:1.11.1.7]
101778806  peroxidase 9 [KO:K00430] [EC:1.11.1.7]
101765161  peroxidase 2 [KO:K00430] [EC:1.11.1.7]
101773534  peroxidase 27 [KO:K00430] [EC:1.11.1.7]
101786070  peroxidase 19 [KO:K00430] [EC:1.11.1.7]
101774929  peroxidase 18 [KO:K00430] [EC:1.11.1.7]
101776191  peroxidase 56 [KO:K00430] [EC:1.11.1.7]
101763258  peroxidase N [KO:K00430] [EC:1.11.1.7]
101763664  peroxidase A2 [KO:K00430] [EC:1.11.1.7]
101753387  peroxidase 2 [KO:K00430] [EC:1.11.1.7]
101753799  peroxidase 2 [KO:K00430] [EC:1.11.1.7]
101754194  peroxidase 2 [KO:K00430] [EC:1.11.1.7]
101755294  peroxidase 1 [KO:K00430] [EC:1.11.1.7]
101755700  peroxidase 1 [KO:K00430] [EC:1.11.1.7]
101756102  peroxidase 1 [KO:K00430] [EC:1.11.1.7]
101756505  peroxidase 1 [KO:K00430] [EC:1.11.1.7]
101757113  peroxidase 31 [KO:K00430] [EC:1.11.1.7]
101754543  peroxidase 4 [KO:K00430] [EC:1.11.1.7]
101755352  cationic peroxidase 1 [KO:K00430] [EC:1.11.1.7]
101778697  peroxidase 40 [KO:K00430] [EC:1.11.1.7]
101779463  peroxidase 5 [KO:K00430] [EC:1.11.1.7]
101782535  peroxidase N [KO:K00430] [EC:1.11.1.7]
101782429  peroxidase 44 [KO:K00430] [EC:1.11.1.7]
101771235  peroxidase 2 [KO:K00430] [EC:1.11.1.7]
101759461  peroxidase 57 [KO:K00430] [EC:1.11.1.7]
101783234  peroxidase 5 [KO:K00430] [EC:1.11.1.7]
101783643  peroxidase 5 [KO:K00430] [EC:1.11.1.7]
101763937  peroxidase 57 [KO:K00430] [EC:1.11.1.7]
101764346  peroxidase 57-like [KO:K00430] [EC:1.11.1.7]
101764750  peroxidase 57 [KO:K00430] [EC:1.11.1.7]
101764963  peroxidase 4 isoform X1 [KO:K00430] [EC:1.11.1.7]
101763195  peroxidase 44 [KO:K00430] [EC:1.11.1.7]
101782497  peroxidase 1 [KO:K00430] [EC:1.11.1.7]
101764788  peroxidase 51 [KO:K00430] [EC:1.11.1.7]
101757945  peroxidase 51 [KO:K00430] [EC:1.11.1.7]
101757689  peroxidase 70 [KO:K00430] [EC:1.11.1.7]
101765668  peroxidase A2 [KO:K00430] [EC:1.11.1.7]
101766082  peroxidase A2 [KO:K00430] [EC:1.11.1.7]
101766490  peroxidase A2 [KO:K00430] [EC:1.11.1.7]
101767314  peroxidase A2 [KO:K00430] [EC:1.11.1.7]
101779210  peroxidase 57 [KO:K00430] [EC:1.11.1.7]
101775003  peroxidase 15 [KO:K00430] [EC:1.11.1.7]
101755213  peroxidase 43 [KO:K00430] [EC:1.11.1.7]
101769975  peroxidase 43 [KO:K00430] [EC:1.11.1.7]
101754287  peroxidase 2 [KO:K00430] [EC:1.11.1.7]
101756919  peroxidase 1 [KO:K00430] [EC:1.11.1.7]
101776354  peroxidase 3 [KO:K00430] [EC:1.11.1.7]
101785869  peroxidase 4 [KO:K00430] [EC:1.11.1.7]
101769201  peroxidase 11 [KO:K00430] [EC:1.11.1.7]
101764064  peroxidase 15 [KO:K00430] [EC:1.11.1.7]
101756652  peroxidase P7 [KO:K00430] [EC:1.11.1.7]
111255817  peroxidase 70-like [KO:K00430] [EC:1.11.1.7]
101758456  peroxidase 2 [KO:K00430] [EC:1.11.1.7]
111256430  peroxidase 2-like [KO:K00430] [EC:1.11.1.7]
111257863  peroxidase 64 [KO:K00430] [EC:1.11.1.7]
Compound
C00079  L-Phenylalanine
C00082  L-Tyrosine
C00223  p-Coumaroyl-CoA
C00315  Spermidine
C00323  Caffeoyl-CoA
C00406  Feruloyl-CoA
C00411  Sinapoyl-CoA
C00423  trans-Cinnamate
C00482  Sinapate
C00540  Cinnamoyl-CoA
C00590  Coniferyl alcohol
C00761  Coniferin
C00811  4-Coumarate
C00852  Chlorogenate
C00903  Cinnamaldehyde
C00933  Sinapine
C01175  1-O-Sinapoyl-beta-D-glucose
C01197  Caffeate
C01494  Ferulate
C01533  Syringin
C02325  Sinapyl alcohol
C02646  4-Coumaryl alcohol
C02666  Coniferyl aldehyde
C02887  Sinapoyl malate
C02947  4-Coumaroylshikimate
C04366  3-(2-Carboxyethenyl)-cis,cis-muconate
C05608  4-Hydroxycinnamyl aldehyde
C05610  Sinapoyl aldehyde
C05619  5-Hydroxyferulic acid
C05627  4-Hydroxystyrene
C05855  4-Hydroxycinnamyl alcohol 4-D-glucoside
C06224  3,4-Dihydroxystyrene
C10428  Anethole
C10434  5-O-Caffeoylshikimic acid
C10452  Estragole
C10453  Eugenol
C10454  Methyleugenol
C10469  Isoeugenol
C10478  Methylisoeugenol
C10945  Caffeic aldehyde
C12203  5-Hydroxyferuloyl-CoA
C12204  5-Hydroxyconiferaldehyde
C12205  5-Hydroxyconiferyl alcohol
C12206  Caffeyl alcohol
C12208  p-Coumaroyl quinic acid
C15804  p-Hydroxyphenyl lignin
C15805  Guaiacyl lignin
C15806  Syringyl lignin
C15807  5-Hydroxy-guaiacyl lignin
C16930  Chavicol
C18069  N1,N5,N10-Tricoumaroyl spermidine
C18070  N1,N5,N10-Tricaffeoyl spermidine
C18071  N1,N5,N10-Triferuloyl spermidine
C18072  N1,N5,N10-Tri(hydroxyferuloyl) spermidine
C18073  N1,N5-Di(hydroxyferuloyl)-N10-sinapoyl spermidine
C20225  Coniferyl acetate
C20464  Isochavicol
C20465  Coumaryl acetate
Reference
  Authors
Nair RB, Bastress KL, Ruegger MO, Denault JW, Chapple C.
  Title
The Arabidopsis thaliana REDUCED EPIDERMAL FLUORESCENCE1 gene encodes an aldehyde dehydrogenase involved in ferulic acid and sinapic acid biosynthesis.
  Journal
Plant Cell 16:544-54 (2004)
DOI:10.1105/tpc.017509
Reference
  Authors
Baucher M, Halpin C, Petit-Conil M, Boerjan W.
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Related
pathway
sita00130  Ubiquinone and other terpenoid-quinone biosynthesis
sita00400  Phenylalanine, tyrosine and tryptophan biosynthesis
sita00941  Flavonoid biosynthesis
sita00945  Stilbenoid, diarylheptanoid and gingerol biosynthesis
KO pathway
ko00940   
LinkDB

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