PATHWAY: skt01100 Help Entry skt01100                    Pathway                                 Name Metabolic pathways - Skermanella sp. TT6 Class BRITE hierarchy Pathway map skt01100   Metabolic pathways Module skt_M00001   Glycolysis (Embden-Meyerhof pathway), glucose => pyruvate [PATH:skt01100] skt_M00002   Glycolysis, core module involving three-carbon compounds [PATH:skt01100] skt_M00003   Gluconeogenesis, oxaloacetate => fructose-6P [PATH:skt01100] skt_M00005   PRPP biosynthesis, ribose 5P => PRPP [PATH:skt01100] skt_M00007   Pentose phosphate pathway, non-oxidative phase, fructose 6P => ribose 5P [PATH:skt01100] skt_M00009   Citrate cycle (TCA cycle, Krebs cycle) [PATH:skt01100] skt_M00010   Citrate cycle, first carbon oxidation, oxaloacetate => 2-oxoglutarate [PATH:skt01100] skt_M00011   Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate [PATH:skt01100] skt_M00012   Glyoxylate cycle [PATH:skt01100] skt_M00015   Proline biosynthesis, glutamate => proline [PATH:skt01100] skt_M00016   Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine [PATH:skt01100] skt_M00017   Methionine biosynthesis, aspartate => homoserine => methionine [PATH:skt01100] skt_M00018   Threonine biosynthesis, aspartate => homoserine => threonine [PATH:skt01100] skt_M00019   Valine/isoleucine biosynthesis, pyruvate => valine / 2-oxobutanoate => isoleucine [PATH:skt01100] skt_M00020   Serine biosynthesis, glycerate-3P => serine [PATH:skt01100] skt_M00021   Cysteine biosynthesis, serine => cysteine [PATH:skt01100] skt_M00023   Tryptophan biosynthesis, chorismate => tryptophan [PATH:skt01100] skt_M00026   Histidine biosynthesis, PRPP => histidine [PATH:skt01100] skt_M00028   Ornithine biosynthesis, glutamate => ornithine [PATH:skt01100] skt_M00046   Pyrimidine degradation, uracil => beta-alanine, thymine => 3-aminoisobutanoate [PATH:skt01100] skt_M00048   De novo purine biosynthesis, PRPP + glutamine => IMP [PATH:skt01100] skt_M00049   Adenine ribonucleotide biosynthesis, IMP => ADP,ATP [PATH:skt01100] skt_M00050   Guanine ribonucleotide biosynthesis, IMP => GDP,GTP [PATH:skt01100] skt_M00052   Pyrimidine ribonucleotide biosynthesis, UMP => UDP/UTP,CDP/CTP [PATH:skt01100] skt_M00061   D-Glucuronate degradation, D-glucuronate => pyruvate + D-glyceraldehyde 3P [PATH:skt01100] skt_M00082   Fatty acid biosynthesis, initiation [PATH:skt01100] skt_M00083   Fatty acid biosynthesis, elongation [PATH:skt01100] skt_M00086   beta-Oxidation, acyl-CoA synthesis [PATH:skt01100] skt_M00087   beta-Oxidation [PATH:skt01100] skt_M00091   Phosphatidylcholine (PC) biosynthesis, PE => PC [PATH:skt01100] skt_M00093   Phosphatidylethanolamine (PE) biosynthesis, PA => PS => PE [PATH:skt01100] skt_M00115   NAD biosynthesis, aspartate => quinolinate => NAD [PATH:skt01100] skt_M00118   Glutathione biosynthesis, glutamate => glutathione [PATH:skt01100] skt_M00120   Coenzyme A biosynthesis, pantothenate => CoA [PATH:skt01100] skt_M00122   Cobalamin biosynthesis, cobyrinate a,c-diamide => cobalamin [PATH:skt01100] skt_M00134   Polyamine biosynthesis, arginine => ornithine => putrescine [PATH:skt01100] skt_M00149   Succinate dehydrogenase, prokaryotes [PATH:skt01100] skt_M00151   Cytochrome bc1 complex respiratory unit [PATH:skt01100] skt_M00155   Cytochrome c oxidase, prokaryotes [PATH:skt01100] skt_M00156   Cytochrome c oxidase, cbb3-type [PATH:skt01100] skt_M00165   Reductive pentose phosphate cycle (Calvin cycle) [PATH:skt01100] skt_M00168   CAM (Crassulacean acid metabolism), dark [PATH:skt01100] skt_M00169   CAM (Crassulacean acid metabolism), light [PATH:skt01100] skt_M00175   Nitrogen fixation, nitrogen => ammonia [PATH:skt01100] skt_M00176   Assimilatory sulfate reduction, sulfate => H2S [PATH:skt01100] skt_M00307   Pyruvate oxidation, pyruvate => acetyl-CoA [PATH:skt01100] skt_M00432   Leucine biosynthesis, 2-oxoisovalerate => 2-oxoisocaproate [PATH:skt01100] skt_M00531   Assimilatory nitrate reduction, nitrate => ammonia [PATH:skt01100] skt_M00549   Nucleotide sugar biosynthesis, glucose => UDP-glucose [PATH:skt01100] skt_M00552   D-galactonate degradation, De Ley-Doudoroff pathway, D-galactonate => glycerate-3P [PATH:skt01100] skt_M00555   Betaine biosynthesis, choline => betaine [PATH:skt01100] skt_M00565   Trehalose biosynthesis, D-glucose 1P => trehalose [PATH:skt01100] skt_M00570   Isoleucine biosynthesis, threonine => 2-oxobutanoate => isoleucine [PATH:skt01100] skt_M00595   Thiosulfate oxidation by SOX complex, thiosulfate => sulfate [PATH:skt01100] skt_M00621   Glycine cleavage system [PATH:skt01100] skt_M00741   Propanoyl-CoA metabolism, propanoyl-CoA => succinyl-CoA [PATH:skt01100] skt_M00793   dTDP-L-rhamnose biosynthesis [PATH:skt01100] skt_M00844   Arginine biosynthesis, ornithine => arginine [PATH:skt01100] skt_M00854   Glycogen biosynthesis, glucose-1P => glycogen/starch [PATH:skt01100] skt_M00880   Molybdenum cofactor biosynthesis, GTP => molybdenum cofactor [PATH:skt01100] skt_M00881   Lipoic acid biosynthesis, plants and bacteria, octanoyl-ACP => dihydrolipoyl-E2/H [PATH:skt01100] skt_M00909   UDP-N-acetyl-D-glucosamine biosynthesis, prokaryotes, glucose => UDP-GlcNAc [PATH:skt01100] skt_M00958   Adenine ribonucleotide degradation, AMP => Urate [PATH:skt01100] skt_M00959   Guanine ribonucleotide degradation, GMP => Urate [PATH:skt01100] skt_M00970   Proline degradation, proline => glutamate [PATH:skt01100] skt_M00975   Betaine degradation, bacteria, betaine => pyruvate [PATH:skt01100] Organism Skermanella sp. TT6 [GN:skt] Related pathway skt00010   Glycolysis / Gluconeogenesis skt00020   Citrate cycle (TCA cycle) skt00030   Pentose phosphate pathway skt00040   Pentose and glucuronate interconversions skt00051   Fructose and mannose metabolism skt00052   Galactose metabolism skt00053   Ascorbate and aldarate metabolism skt00061   Fatty acid biosynthesis skt00071   Fatty acid degradation skt00130   Ubiquinone and other terpenoid-quinone biosynthesis skt00190   Oxidative phosphorylation skt00220   Arginine biosynthesis skt00230   Purine metabolism skt00240   Pyrimidine metabolism skt00250   Alanine, aspartate and glutamate metabolism skt00260   Glycine, serine and threonine metabolism skt00261   Monobactam biosynthesis skt00270   Cysteine and methionine metabolism skt00280   Valine, leucine and isoleucine degradation skt00290   Valine, leucine and isoleucine biosynthesis skt00300   Lysine biosynthesis skt00310   Lysine degradation skt00311   Penicillin and cephalosporin biosynthesis skt00330   Arginine and proline metabolism skt00332   Carbapenem biosynthesis skt00340   Histidine metabolism skt00350   Tyrosine metabolism skt00360   Phenylalanine metabolism skt00361   Chlorocyclohexane and chlorobenzene degradation skt00362   Benzoate degradation skt00364   Fluorobenzoate degradation skt00380   Tryptophan metabolism skt00400   Phenylalanine, tyrosine and tryptophan biosynthesis skt00401   Novobiocin biosynthesis skt00410   beta-Alanine metabolism skt00430   Taurine and hypotaurine metabolism skt00440   Phosphonate and phosphinate metabolism skt00450   Selenocompound metabolism skt00460   Cyanoamino acid metabolism skt00470   D-Amino acid metabolism skt00480   Glutathione metabolism skt00500   Starch and sucrose metabolism skt00520   Amino sugar and nucleotide sugar metabolism skt00521   Streptomycin biosynthesis skt00523   Polyketide sugar unit biosynthesis skt00525   Acarbose and validamycin biosynthesis skt00540   Lipopolysaccharide biosynthesis skt00541   O-Antigen nucleotide sugar biosynthesis skt00543   Exopolysaccharide biosynthesis skt00550   Peptidoglycan biosynthesis skt00552   Teichoic acid biosynthesis skt00561   Glycerolipid metabolism skt00562   Inositol phosphate metabolism skt00564   Glycerophospholipid metabolism skt00565   Ether lipid metabolism skt00592   alpha-Linolenic acid metabolism skt00620   Pyruvate metabolism skt00623   Toluene degradation skt00625   Chloroalkane and chloroalkene degradation skt00626   Naphthalene degradation skt00627   Aminobenzoate degradation skt00630   Glyoxylate and dicarboxylate metabolism skt00633   Nitrotoluene degradation skt00640   Propanoate metabolism skt00643   Styrene degradation skt00650   Butanoate metabolism skt00660   C5-Branched dibasic acid metabolism skt00670   One carbon pool by folate skt00680   Methane metabolism skt00730   Thiamine metabolism skt00740   Riboflavin metabolism skt00750   Vitamin B6 metabolism skt00760   Nicotinate and nicotinamide metabolism skt00770   Pantothenate and CoA biosynthesis skt00780   Biotin metabolism skt00785   Lipoic acid metabolism skt00790   Folate biosynthesis skt00791   Atrazine degradation skt00860   Porphyrin metabolism skt00900   Terpenoid backbone biosynthesis skt00906   Carotenoid biosynthesis skt00907   Pinene, camphor and geraniol degradation skt00909   Sesquiterpenoid and triterpenoid biosynthesis skt00910   Nitrogen metabolism skt00920   Sulfur metabolism skt00930   Caprolactam degradation skt00946   Degradation of flavonoids skt00998   Biosynthesis of various antibiotics skt00999   Biosynthesis of various plant secondary metabolites skt01040   Biosynthesis of unsaturated fatty acids skt01053   Biosynthesis of siderophore group nonribosomal peptides KO pathway ko01100     LinkDB All DBs

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