KEGG   PATHWAY: smeo00010
Entry
smeo00010                   Pathway                                
Name
Glycolysis / Gluconeogenesis - Silurus meridionalis (southern catfish)
Description
Glycolysis is the process of converting glucose into pyruvate and generating small amounts of ATP (energy) and NADH (reducing power). It is a central pathway that produces important precursor metabolites: six-carbon compounds of glucose-6P and fructose-6P and three-carbon compounds of glycerone-P, glyceraldehyde-3P, glycerate-3P, phosphoenolpyruvate, and pyruvate [MD:M00001]. Acetyl-CoA, another important precursor metabolite, is produced by oxidative decarboxylation of pyruvate [MD:M00307]. When the enzyme genes of this pathway are examined in completely sequenced genomes, the reaction steps of three-carbon compounds from glycerone-P to pyruvate form a conserved core module [MD:M00002], which is found in almost all organisms and which sometimes contains operon structures in bacterial genomes. Gluconeogenesis is a synthesis pathway of glucose from noncarbohydrate precursors. It is essentially a reversal of glycolysis with minor variations of alternative paths [MD:M00003].
Class
Metabolism; Carbohydrate metabolism
Pathway map
smeo00010  Glycolysis / Gluconeogenesis
smeo00010

Module
smeo_M00001  Glycolysis (Embden-Meyerhof pathway), glucose => pyruvate [PATH:smeo00010]
smeo_M00002  Glycolysis, core module involving three-carbon compounds [PATH:smeo00010]
smeo_M00003  Gluconeogenesis, oxaloacetate => fructose-6P [PATH:smeo00010]
smeo_M00307  Pyruvate oxidation, pyruvate => acetyl-CoA [PATH:smeo00010]
Other DBs
GO: 0006096 0006094
Organism
Silurus meridionalis (southern catfish) [GN:smeo]
Gene
124375821  hk1; hexokinase-1 [KO:K00844] [EC:2.7.1.1]
124375835  hkdc1; hexokinase HKDC1 [KO:K00844] [EC:2.7.1.1]
124380564  hk2; LOW QUALITY PROTEIN: hexokinase-2 [KO:K00844] [EC:2.7.1.1]
124399852  gck; hexokinase-4 isoform X1 [KO:K12407] [EC:2.7.1.2]
124395329  gpib; glucose-6-phosphate isomerase b [KO:K01810] [EC:5.3.1.9]
124392733  gpia; glucose-6-phosphate isomerase a [KO:K01810] [EC:5.3.1.9]
124382822  pfkla; ATP-dependent 6-phosphofructokinase, liver type [KO:K00850] [EC:2.7.1.11]
124383982  pfkpa; ATP-dependent 6-phosphofructokinase, platelet type isoform X1 [KO:K00850] [EC:2.7.1.11]
124391414  pfklb; phosphofructokinase, liver b [KO:K00850] [EC:2.7.1.11]
124380590  fructose-1,6-bisphosphatase 1-like [KO:K03841] [EC:3.1.3.11]
124380653  fbp2; fructose-1,6-bisphosphatase isozyme 2 [KO:K03841] [EC:3.1.3.11]
124380913  fructose-1,6-bisphosphatase 1-like [KO:K03841] [EC:3.1.3.11]
124397988  aldocb; fructose-bisphosphate aldolase C-B [KO:K01623] [EC:4.1.2.13]
124394683  aldoca; fructose-bisphosphate aldolase C-A [KO:K01623] [EC:4.1.2.13]
124386349  aldob; fructose-bisphosphate aldolase B [KO:K01623] [EC:4.1.2.13]
124389257  aldoab; aldolase a, fructose-bisphosphate, b [KO:K01623] [EC:4.1.2.13]
124385237  tpi1b; triosephosphate isomerase B [KO:K01803] [EC:5.3.1.1]
124384832  gapdh; glyceraldehyde-3-phosphate dehydrogenase [KO:K00134] [EC:1.2.1.12]
124403723  gapdhs; glyceraldehyde-3-phosphate dehydrogenase 2 [KO:K10705] [EC:1.2.1.12]
124398267  pgk1; phosphoglycerate kinase 1 isoform X1 [KO:K00927] [EC:2.7.2.3]
124398383  pgam2; phosphoglycerate mutase 2 [KO:K01834] [EC:5.4.2.11]
124398404  pgam1a; phosphoglycerate mutase 1a [KO:K01834] [EC:5.4.2.11]
124382192  gamma-enolase [KO:K01689] [EC:4.2.1.11]
124379377  beta-enolase [KO:K01689] [EC:4.2.1.11]
124392291  eno1b; enolase 1b, (alpha) [KO:K01689] [EC:4.2.1.11]
124389697  eno4; enolase 4 [KO:K27394] [EC:4.2.1.11]
124395662  pkma; pyruvate kinase PKM isoform X1 [KO:K00873] [EC:2.7.1.40]
124383783  pklr; pyruvate kinase PKLR [KO:K00873] [EC:2.7.1.40]
124391892  pkmb; pyruvate kinase M1/2b [KO:K00873] [EC:2.7.1.40]
124375316  pdha1b; LOW QUALITY PROTEIN: pyruvate dehydrogenase E1 subunit alpha 1b [KO:K00161] [EC:1.2.4.1]
124379344  pdha1a; pyruvate dehydrogenase E1 subunit alpha 1a isoform X1 [KO:K00161] [EC:1.2.4.1]
124402318  pdhb; pyruvate dehydrogenase E1 component subunit beta, mitochondrial [KO:K00162] [EC:1.2.4.1]
124398127  dlat; dihydrolipoyllysine-residue acetyltransferase component of pyruvate dehydrogenase complex, mitochondrial [KO:K00627] [EC:2.3.1.12]
124392208  dldh; dihydrolipoyl dehydrogenase, mitochondrial [KO:K00382] [EC:1.8.1.4]
124401102  ldhba; L-lactate dehydrogenase B-A chain [KO:K00016] [EC:1.1.1.27]
124392134  ldhbb; L-lactate dehydrogenase B-B chain [KO:K00016] [EC:1.1.1.27]
124392225  ldha; L-lactate dehydrogenase A chain isoform X1 [KO:K00016] [EC:1.1.1.27]
124401236  alcohol dehydrogenase 1-like [KO:K00121] [EC:1.1.1.284 1.1.1.1]
124385887  alcohol dehydrogenase class-3-like isoform X1 [KO:K00121] [EC:1.1.1.284 1.1.1.1]
124385937  adh5; alcohol dehydrogenase class-3 isoform X1 [KO:K00121] [EC:1.1.1.284 1.1.1.1]
124393328  akr1a1b; aldo-keto reductase family 1 member A1-B isoform X1 [KO:K00002] [EC:1.1.1.2]
124398384  aldh3a2b; aldehyde dehydrogenase family 3 member A2b isoform X1 [KO:K00128] [EC:1.2.1.3]
124394638  aldh3a1; aldehyde dehydrogenase, dimeric NADP-preferring [KO:K00128] [EC:1.2.1.3]
124394640  aldh3a2a; LOW QUALITY PROTEIN: aldehyde dehydrogenase family 3 member A2a [KO:K00128] [EC:1.2.1.3]
124376849  aldh16a1; LOW QUALITY PROTEIN: aldehyde dehydrogenase family 16 member A1 [KO:K00128] [EC:1.2.1.3]
124380404  aldehyde dehydrogenase, mitochondrial-like [KO:K00128] [EC:1.2.1.3]
124393925  aldh7a1; alpha-aminoadipic semialdehyde dehydrogenase [KO:K14085] [EC:1.2.1.31 1.2.1.8 1.2.1.3]
124400405  aldh9a1a.1; 4-trimethylaminobutyraldehyde dehydrogenase A [KO:K00149] [EC:1.2.1.47 1.2.1.3]
124387435  aldh9a1b; LOW QUALITY PROTEIN: 4-trimethylaminobutyraldehyde dehydrogenase B [KO:K00149] [EC:1.2.1.47 1.2.1.3]
124397111  aldh3b1; aldehyde dehydrogenase family 3 member B1 [KO:K00129] [EC:1.2.1.5]
124399011  acss2; acetyl-coenzyme A synthetase, cytoplasmic isoform X1 [KO:K01895] [EC:6.2.1.1]
124403025  acss2l; acyl-CoA synthetase short chain family member 2 like [KO:K01895] [EC:6.2.1.1]
124390108  acss1; acetyl-coenzyme A synthetase 2-like, mitochondrial [KO:K01895] [EC:6.2.1.1]
124400359  galm; aldose 1-epimerase [KO:K01785] [EC:5.1.3.3]
124391716  pgm1; phosphoglucomutase-1 [KO:K01835] [EC:5.4.2.2]
124388096  phosphoglucomutase-1-like [KO:K01835] [EC:5.4.2.2]
124381681  pgm2; phosphoglucomutase-2 [KO:K15779] [EC:5.4.2.2 5.4.2.7]
124389409  g6pc1a.1; LOW QUALITY PROTEIN: glucose-6-phosphatase a, catalytic subunit, tandem duplicate 1 [KO:K01084] [EC:3.1.3.9]
124388620  g6pc1a.2; glucose-6-phosphatase catalytic subunit 1 [KO:K01084] [EC:3.1.3.9]
124388895  g6pc3; glucose-6-phosphatase 3 [KO:K01084] [EC:3.1.3.9]
124390557  adpgk2; ADP-dependent glucokinase [KO:K08074] [EC:2.7.1.147]
124392371  adpgk; ADP-dependent glucokinase isoform X1 [KO:K08074] [EC:2.7.1.147]
124386517  bpgm; bisphosphoglycerate mutase [KO:K01837] [EC:5.4.2.4 5.4.2.11]
124390225  multiple inositol polyphosphate phosphatase 1-like [KO:K03103] [EC:3.1.3.62 3.1.3.80]
124388365  minpp1b; multiple inositol polyphosphate phosphatase 1b [KO:K03103] [EC:3.1.3.62 3.1.3.80]
124384897  pck2; phosphoenolpyruvate carboxykinase [GTP], mitochondrial [KO:K01596] [EC:4.1.1.32]
Compound
C00022  Pyruvate
C00024  Acetyl-CoA
C00031  D-Glucose
C00033  Acetate
C00036  Oxaloacetate
C00068  Thiamin diphosphate
C00074  Phosphoenolpyruvate
C00084  Acetaldehyde
C00085  D-Fructose 6-phosphate
C00103  D-Glucose 1-phosphate
C00111  Glycerone phosphate
C00118  D-Glyceraldehyde 3-phosphate
C00186  (S)-Lactate
C00197  3-Phospho-D-glycerate
C00221  beta-D-Glucose
C00236  3-Phospho-D-glyceroyl phosphate
C00267  alpha-D-Glucose
C00354  D-Fructose 1,6-bisphosphate
C00469  Ethanol
C00631  2-Phospho-D-glycerate
C00668  alpha-D-Glucose 6-phosphate
C01159  2,3-Bisphospho-D-glycerate
C01172  beta-D-Glucose 6-phosphate
C01451  Salicin
C05125  2-(alpha-Hydroxyethyl)thiamine diphosphate
C06186  Arbutin
C06187  Arbutin 6-phosphate
C06188  Salicin 6-phosphate
C15972  Enzyme N6-(lipoyl)lysine
C15973  Enzyme N6-(dihydrolipoyl)lysine
C16255  [Dihydrolipoyllysine-residue acetyltransferase] S-acetyldihydrolipoyllysine
Reference
  Authors
Nishizuka Y (ed).
  Title
[Metabolic Maps] (In Japanese)
  Journal
Tokyo Kagaku Dojin (1980)
Reference
  Authors
Nishizuka Y, Seyama Y, Ikai A, Ishimura Y, Kawaguchi A (eds).
  Title
[Cellular Functions and Metabolic Maps] (In Japanese)
  Journal
Tokyo Kagaku Dojin (1997)
Reference
  Authors
Michal G.
  Title
Biochemical Pathways
  Journal
Wiley (1999)
Related
pathway
smeo00020  Citrate cycle (TCA cycle)
smeo00030  Pentose phosphate pathway
smeo00500  Starch and sucrose metabolism
smeo00620  Pyruvate metabolism
smeo00640  Propanoate metabolism
KO pathway
ko00010   
LinkDB

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