KEGG   PATHWAY: sna02010
Entry
sna02010                    Pathway                                
Name
ABC transporters - Stackebrandtia nassauensis
Description
The ATP-binding cassette (ABC) transporters form one of the largest known protein families, and are widespread in bacteria, archaea, and eukaryotes. They couple ATP hydrolysis to active transport of a wide variety of substrates such as ions, sugars, lipids, sterols, peptides, proteins, and drugs. The structure of a prokaryotic ABC transporter usually consists of three components; typically two integral membrane proteins each having six transmembrane segments, two peripheral proteins that bind and hydrolyze ATP, and a periplasmic (or lipoprotein) substrate-binding protein. Many of the genes for the three components form operons as in fact observed in many bacterial and archaeal genomes. On the other hand, in a typical eukaryotic ABC transporter, the membrane spanning protein and the ATP-binding protein are fused, forming a multi-domain protein with the membrane-spanning domain (MSD) and the nucleotide-binding domain (NBD).
Class
Environmental Information Processing; Membrane transport
Pathway map
sna02010  ABC transporters
sna02010

Other DBs
GO: 0043190 0043191 0043192
TC: 3.A.1
Organism
Stackebrandtia nassauensis [GN:sna]
Gene
Snas_1099  molybdenum ABC transporter, periplasmic molybdate-binding protein [KO:K02020]
Snas_1100  molybdate ABC transporter, inner membrane subunit [KO:K02018]
Snas_2396  Substrate-binding region of ABC-type glycine betaine transport system [KO:K02002]
Snas_2395  binding-protein-dependent transport systems inner membrane component [KO:K02001]
Snas_2394  glycine betaine/L-proline ABC transporter, ATPase subunit [KO:K02000] [EC:7.6.2.9]
Snas_5178  Substrate-binding region of ABC-type glycine betaine transport system [KO:K05845]
Snas_1036  Substrate-binding region of ABC-type glycine betaine transport system [KO:K05845]
Snas_5179  binding-protein-dependent transport systems inner membrane component [KO:K05846]
Snas_5181  binding-protein-dependent transport systems inner membrane component [KO:K05846]
Snas_1034  binding-protein-dependent transport systems inner membrane component [KO:K05846]
Snas_1035  binding-protein-dependent transport systems inner membrane component [KO:K05846]
Snas_5180  glycine betaine/L-proline ABC transporter, ATPase subunit [KO:K05847] [EC:7.6.2.9]
Snas_1033  ABC transporter related protein [KO:K05847] [EC:7.6.2.9]
Snas_0020  ABC transporter related protein [KO:K10112] [EC:7.5.2.-]
Snas_0170  ABC transporter related protein [KO:K10112] [EC:7.5.2.-]
Snas_1044  ABC transporter related protein [KO:K10112] [EC:7.5.2.-]
Snas_4647  ABC transporter related protein [KO:K10112] [EC:7.5.2.-]
Snas_2289  ABC transporter related protein [KO:K10112] [EC:7.5.2.-]
Snas_4070  ABC transporter related protein [KO:K10112] [EC:7.5.2.-]
Snas_4075  ABC transporter related protein [KO:K10112] [EC:7.5.2.-]
Snas_1407  ABC transporter related protein [KO:K10112] [EC:7.5.2.-]
Snas_5891  extracellular solute-binding protein family 1 [KO:K15770]
Snas_3696  extracellular solute-binding protein family 1 [KO:K15770]
Snas_5890  binding-protein-dependent transport systems inner membrane component [KO:K15771]
Snas_5889  binding-protein-dependent transport systems inner membrane component [KO:K15772]
Snas_3251  extracellular solute-binding protein family 1 [KO:K10117]
Snas_3250  binding-protein-dependent transport systems inner membrane component [KO:K10118]
Snas_3249  binding-protein-dependent transport systems inner membrane component [KO:K10119]
Snas_2733  extracellular solute-binding protein family 1 [KO:K10188]
Snas_2734  binding-protein-dependent transport systems inner membrane component [KO:K10189]
Snas_2735  binding-protein-dependent transport systems inner membrane component [KO:K10190]
Snas_4648  extracellular solute-binding protein family 1 [KO:K10232]
Snas_4649  binding-protein-dependent transport systems inner membrane component [KO:K10233]
Snas_4650  binding-protein-dependent transport systems inner membrane component [KO:K10234]
Snas_5755  ABC-type sugar transport system periplasmic component-like protein [KO:K17318]
Snas_5753  binding-protein-dependent transport systems inner membrane component [KO:K17319]
Snas_5754  binding-protein-dependent transport systems inner membrane component [KO:K17320]
Snas_4644  extracellular solute-binding protein family 1 [KO:K10236]
Snas_1041  extracellular solute-binding protein family 1 [KO:K10236]
Snas_4645  binding-protein-dependent transport systems inner membrane component [KO:K10237]
Snas_1042  binding-protein-dependent transport systems inner membrane component [KO:K10237]
Snas_4646  binding-protein-dependent transport systems inner membrane component [KO:K10238]
Snas_1043  binding-protein-dependent transport systems inner membrane component [KO:K10238]
Snas_2855  extracellular solute-binding protein family 1 [KO:K10200]
Snas_2856  binding-protein-dependent transport systems inner membrane component [KO:K10201]
Snas_2857  binding-protein-dependent transport systems inner membrane component [KO:K10202]
Snas_6282  extracellular solute-binding protein family 1 [KO:K10240]
Snas_6281  binding-protein-dependent transport systems inner membrane component [KO:K10241]
Snas_6280  binding-protein-dependent transport systems inner membrane component [KO:K10242]
Snas_2013  extracellular solute-binding protein family 1 [KO:K17244]
Snas_2014  binding-protein-dependent transport systems inner membrane component [KO:K17245]
Snas_2015  binding-protein-dependent transport systems inner membrane component [KO:K17246]
Snas_2889  xylose ABC transporter, substrate-binding protein [KO:K10546]
Snas_2891  inner-membrane translocator [KO:K10547]
Snas_2890  ABC transporter related protein [KO:K10548] [EC:7.5.2.-]
Snas_1169  virulence factor Mce family protein [KO:K02067]
Snas_1170  virulence factor Mce family protein [KO:K02067]
Snas_1172  virulence factor Mce family protein [KO:K02067]
Snas_1173  virulence factor Mce family protein [KO:K02067]
Snas_0858  virulence factor Mce family protein [KO:K02067]
Snas_1171  virulence factor Mce family protein [KO:K02067]
Snas_0856  protein of unknown function DUF140 [KO:K02066]
Snas_0857  protein of unknown function DUF140 [KO:K02066]
Snas_0855  ABC transporter related protein [KO:K02065]
Snas_1352  basic membrane lipoprotein [KO:K07335]
Snas_1354  inner-membrane translocator [KO:K23535]
Snas_1355  inner-membrane translocator [KO:K23536]
Snas_1353  ABC transporter related protein [KO:K23537]
Snas_0882  extracellular solute-binding protein family 1 [KO:K17315]
Snas_0883  binding-protein-dependent transport systems inner membrane component [KO:K17316]
Snas_0884  binding-protein-dependent transport systems inner membrane component [KO:K17317]
Snas_4653  ABC-type sugar transport system periplasmic component-like protein [KO:K10439]
Snas_4655  inner-membrane translocator [KO:K10440]
Snas_4654  inner-membrane translocator [KO:K10440]
Snas_4656  ABC transporter related protein [KO:K10441] [EC:7.5.2.7]
Snas_1126  D-xylose-binding periplasmic ABC transporter protein [KO:K10543]
Snas_1124  inner-membrane translocator [KO:K10544]
Snas_1125  ABC transporter related protein [KO:K10545] [EC:7.5.2.10]
Snas_3621  periplasmic binding protein/LacI transcriptional regulator [KO:K10552]
Snas_3130  periplasmic binding protein/LacI transcriptional regulator [KO:K10552]
Snas_3129  inner-membrane translocator [KO:K10553]
Snas_3622  inner-membrane translocator [KO:K10553]
Snas_3623  ABC transporter related protein [KO:K10554]
Snas_3128  ABC transporter related protein [KO:K10554]
Snas_3702  rhamnose ABC transporter, periplasmic rhamnose-binding protein [KO:K10559]
Snas_3700  inner-membrane translocator [KO:K10560]
Snas_3701  inner-membrane translocator [KO:K10561]
Snas_3699  ABC transporter related protein [KO:K10562] [EC:7.5.2.-]
Snas_1828  extracellular solute-binding protein family 1 [KO:K05813]
Snas_1829  binding-protein-dependent transport systems inner membrane component [KO:K05814]
Snas_1830  binding-protein-dependent transport systems inner membrane component [KO:K05815]
Snas_2217  phosphate ABC transporter, periplasmic phosphate-binding protein [KO:K02040]
Snas_2216  phosphate ABC transporter, inner membrane subunit PstC [KO:K02037]
Snas_2215  phosphate ABC transporter, inner membrane subunit PstA [KO:K02038]
Snas_2214  phosphate ABC transporter, ATPase subunit [KO:K02036] [EC:7.3.2.1]
Snas_4961  phosphonate ABC transporter, periplasmic phosphonate-binding protein [KO:K02044]
Snas_4959  phosphonate ABC transporter, inner membrane subunit [KO:K02042]
Snas_4960  phosphonate ABC transporter, ATPase subunit [KO:K02041] [EC:7.3.2.2]
Snas_3984  extracellular solute-binding protein family 3 [KO:K10005]
Snas_4887  extracellular solute-binding protein family 3 [KO:K10005]
Snas_3985  polar amino acid ABC transporter, inner membrane subunit [KO:K10006]
Snas_3986  polar amino acid ABC transporter, inner membrane subunit [KO:K10007]
Snas_3983  ABC transporter related protein [KO:K10008] [EC:7.4.2.1]
Snas_2846  Extracellular ligand-binding receptor [KO:K01999]
Snas_5603  Extracellular ligand-binding receptor [KO:K01999]
Snas_3774  Extracellular ligand-binding receptor [KO:K01999]
Snas_4136  Extracellular ligand-binding receptor [KO:K01999]
Snas_3688  ABC-type branched-chain amino acid transport systems periplasmic component-like protein [KO:K01999]
Snas_2847  inner-membrane translocator [KO:K01997]
Snas_5602  inner-membrane translocator [KO:K01997]
Snas_3773  inner-membrane translocator [KO:K01997]
Snas_3690  inner-membrane translocator [KO:K01997 K01998]
Snas_5601  ABC transporter related protein [KO:K01995 K01998]
Snas_2848  inner-membrane translocator [KO:K01998]
Snas_3772  inner-membrane translocator [KO:K01998]
Snas_3771  ABC transporter related protein [KO:K01995]
Snas_2849  ABC transporter related protein [KO:K01995]
Snas_2850  ABC transporter related protein [KO:K01996]
Snas_3770  ABC transporter related protein [KO:K01996]
Snas_5600  ABC transporter related protein [KO:K01996]
Snas_1772  NLPA lipoprotein [KO:K02073]
Snas_1773  binding-protein-dependent transport systems inner membrane component [KO:K02072]
Snas_1774  ABC transporter related protein [KO:K02071]
Snas_4144  extracellular solute-binding protein family 5 [KO:K15580]
Snas_5516  extracellular solute-binding protein family 5 [KO:K15580]
Snas_5515  binding-protein-dependent transport systems inner membrane component [KO:K15581]
Snas_4143  binding-protein-dependent transport systems inner membrane component [KO:K15581]
Snas_5514  binding-protein-dependent transport systems inner membrane component [KO:K15582]
Snas_4142  binding-protein-dependent transport systems inner membrane component [KO:K15582]
Snas_4141  oligopeptide/dipeptide ABC transporter, ATPase subunit [KO:K15583]
Snas_4140  oligopeptide/dipeptide ABC transporter, ATPase subunit [KO:K10823]
Snas_2749  periplasmic binding protein [KO:K25286]
Snas_2819  periplasmic binding protein [KO:K25286]
Snas_3525  periplasmic binding protein [KO:K25286]
Snas_4510  periplasmic binding protein [KO:K25286]
Snas_3786  periplasmic binding protein [KO:K25286]
Snas_5337  periplasmic binding protein [KO:K25286]
Snas_3785  transport system permease protein [KO:K23186]
Snas_2748  transport system permease protein [KO:K23186]
Snas_2818  transport system permease protein [KO:K23186]
Snas_4511  transport system permease protein [KO:K23186]
Snas_5336  transport system permease protein [KO:K23186]
Snas_3784  transport system permease protein [KO:K23187]
Snas_2747  transport system permease protein [KO:K23187]
Snas_3527  transport system permease protein [KO:K23187]
Snas_4512  transport system permease protein [KO:K23187]
Snas_5335  transport system permease protein [KO:K23187]
Snas_3783  ABC transporter related protein [KO:K23188] [EC:7.2.2.17 7.2.2.-]
Snas_2746  ABC transporter related protein [KO:K23188] [EC:7.2.2.17 7.2.2.-]
Snas_4513  ABC transporter related protein [KO:K23188] [EC:7.2.2.17 7.2.2.-]
Snas_5334  ABC transporter related protein [KO:K23188] [EC:7.2.2.17 7.2.2.-]
Snas_3867  periplasmic binding protein [KO:K23227]
Snas_3866  transport system permease protein [KO:K23228]
Snas_3868  ABC transporter related protein [KO:K10829] [EC:7.2.2.16]
Snas_2047  periplasmic solute binding protein [KO:K09815]
Snas_2049  ABC-3 protein [KO:K09816]
Snas_2048  ABC transporter related protein [KO:K09817] [EC:7.2.2.20]
Snas_1570  cobalamin (vitamin B12) biosynthesis CbiM protein [KO:K02009]
Snas_1569  cobalamin (vitamin B12) biosynthesis CbiM protein [KO:K02007]
Snas_1571  cobalt ABC transporter, inner membrane subunit CbiQ [KO:K02008]
Snas_1572  cobalt ABC transporter, ATPase subunit [KO:K02006]
Snas_2356  BioY protein [KO:K03523]
Snas_3110  cobalt transport protein [KO:K16785]
Snas_2044  cobalt transport protein [KO:K16785]
Snas_1801  ABC-2 type transporter [KO:K09694]
Snas_1802  ABC-2 type transporter [KO:K09694]
Snas_1800  ABC transporter related protein [KO:K09695]
Snas_5124  ABC transporter related protein [KO:K09810] [EC:7.6.2.-]
Snas_4681  hypothetical protein [KO:K16905]
Snas_4682  hypothetical protein [KO:K16906]
Snas_4683  ABC transporter related protein [KO:K16907] [EC:7.6.2.-]
Snas_1867  protein of unknown function DUF214 [KO:K09811]
Snas_1866  cell division ATP-binding protein FtsE [KO:K09812]
Snas_2825  ABC transporter related protein [KO:K14698] [EC:7.-.-.-]
Snas_3269  ABC transporter related protein [KO:K14698] [EC:7.-.-.-]
Snas_2824  ABC transporter related protein [KO:K14699] [EC:7.-.-.-]
Snas_3268  ABC transporter related protein [KO:K14699] [EC:7.-.-.-]
Snas_0011  ABC transporter related protein [KO:K18893]
Snas_6289  ABC transporter related protein [KO:K18887]
Snas_6290  ABC transporter related protein [KO:K18888]
Snas_1027  ABC transporter, CydDC cysteine exporter (CydDC-E) family, permease/ATP-binding protein CydC [KO:K16012]
Snas_1026  ABC transporter, CydDC cysteine exporter (CydDC-E) family, permease/ATP-binding protein CydD [KO:K16013]
Snas_4883  ABC transporter related protein [KO:K18230]
Compound
C00009  Orthophosphate
C00025  L-Glutamate
C00031  D-Glucose
C00032  Heme
C00034  Manganese
C00037  Glycine
C00038  Zinc cation
C00041  L-Alanine
C00047  L-Lysine
C00049  L-Aspartate
C00051  Glutathione
C00059  Sulfate
C00062  L-Arginine
C00064  L-Glutamine
C00065  L-Serine
C00070  Copper
C00077  L-Ornithine
C00079  L-Phenylalanine
C00086  Urea
C00088  Nitrite
C00089  Sucrose
C00093  sn-Glycerol 3-phosphate
C00095  D-Fructose
C00098  Oligopeptide
C00107  Dipeptide
C00114  Choline
C00116  Glycerol
C00120  Biotin
C00121  D-Ribose
C00123  L-Leucine
C00134  Putrescine
C00135  L-Histidine
C00137  myo-Inositol
C00140  N-Acetyl-D-glucosamine
C00148  L-Proline
C00151  L-Amino acid
C00159  D-Mannose
C00175  Cobalt ion
C00181  D-Xylose
C00183  L-Valine
C00185  Cellobiose
C00188  L-Threonine
C00208  Maltose
C00212  Adenosine
C00243  Lactose
C00244  Nitrate
C00245  Taurine
C00255  Riboflavin
C00259  L-Arabinose
C00288  HCO3-
C00291  Nickel
C00294  Inosine
C00299  Uridine
C00315  Spermidine
C00320  Thiosulfate
C00330  Deoxyguanosine
C00333  D-Galacturonate
C00338  Lipopolysaccharide
C00378  Thiamine
C00379  Xylitol
C00387  Guanosine
C00392  Mannitol
C00407  L-Isoleucine
C00430  5-Aminolevulinate
C00470  Pectate
C00475  Cytidine
C00487  Carnitine
C00491  L-Cystine
C00492  Raffinose
C00503  Erythritol
C00526  Deoxyuridine
C00559  Deoxyadenosine
C00719  Betaine
C00794  D-Sorbitol
C00855  D-Methionine
C00865  Phospholipid
C00881  Deoxycytidine
C00919  Choline sulfate
C00973  Cyclomaltodextrin
C01083  alpha,alpha-Trehalose
C01153  Orthophosphoric monoester
C01157  Hydroxyproline
C01177  Inositol 1-phosphate
C01181  4-Trimethylammoniobutanoate
C01279  4-Amino-5-hydroxymethyl-2-methylpyrimidine
C01330  Sodium cation
C01417  Cyanate
C01487  D-Allose
C01606  Phthalate
C01630  Xylobiose
C01667  Bacitracin
C01674  Chitobiose
C01682  Nopaline
C01684  D-Rhamnose
C01762  Xanthosine
C01834  Lipoprotein
C01835  Maltotriose
C01935  Maltodextrin
C01946  Oleandomycin
C02160  Isomaltotriose
C02273  Digalacturonate
C03557  2-Aminoethylphosphonate
C03611  Galactose oligosaccharide
C03619  Methyl beta-D-galactoside
C04114  (E)-4-(Trimethylammonio)but-2-enoate
C04137  Octopine
C05349  Ciprofloxacin
C05402  Melibiose
C05512  Deoxyinosine
C05776  Vitamin B12
C06227  Fe(III)hydroxamate
C06229  Fe(III)dicitrate
C06230  Fe-enterobactin
C06232  Molybdate
C06687  Norfloxacin
C06705  Capsular polysaccharide
C06706  Lipo-oligosaccharide
C06707  Teichoic acid
C06767  Hemine
C07662  Sparfloxacin
C07663  Moxifloxacin
C11612  Polymyxin B
C13768  Colistin sulfate
C14818  Fe2+
C14819  Fe3+
C15521  Alkanesulfonate
C15719  Coelichelin
C16421  AI-2
C16692  Mannopine
C19609  Nickel(2+)
C19872  N-Formyl-4-amino-5-aminomethyl-2-methylpyrimidine
C20570  alpha-1,5-L-Arabinobiose
C20571  alpha-1,5-L-Arabinotriose
C20572  alpha-1,5-L-Arabinotetraose
C20573  Aldotetraouronic acid
C20679  Tungstate
C21066  D-Galactofuranose
C22040  S-Methyl-L-cysteine
G00457  Maltotetraose
Reference
PMID:9799792
  Authors
Tomii K, Kanehisa M.
  Title
A comparative analysis of ABC transporters in complete microbial genomes.
  Journal
Genome Res 8:1048-59 (1998)
DOI:10.1101/gr.8.10.1048
Reference
PMID:18424520
  Authors
Sperandeo P, Lau FK, Carpentieri A, De Castro C, Molinaro A, Deho G, Silhavy TJ, Polissi A
  Title
Functional analysis of the protein machinery required for transport of lipopolysaccharide to the outer membrane of Escherichia coli.
  Journal
J Bacteriol 190:4460-9 (2008)
DOI:10.1128/JB.00270-08
Reference
PMID:18375759
  Authors
Ruiz N, Gronenberg LS, Kahne D, Silhavy TJ
  Title
Identification of two inner-membrane proteins required for the transport of lipopolysaccharide to the outer membrane of Escherichia coli.
  Journal
Proc Natl Acad Sci U S A 105:5537-42 (2008)
DOI:10.1073/pnas.0801196105
Reference
PMID:10557362
  Authors
Omata T, Price GD, Badger MR, Okamura M, Gohta S, Ogawa T
  Title
Identification of an ATP-binding cassette transporter involved in bicarbonate uptake in the cyanobacterium Synechococcus sp. strain PCC 7942.
  Journal
Proc Natl Acad Sci U S A 96:13571-6 (1999)
DOI:10.1073/pnas.96.23.13571
Reference
PMID:11731493
  Authors
Quintero MJ, Montesinos ML, Herrero A, Flores E
  Title
Identification of genes encoding amino acid permeases by inactivation of selected ORFs from the Synechocystis genomic sequence.
  Journal
Genome Res 11:2034-40 (2001)
DOI:10.1101/gr.196301
Reference
PMID:16135226
  Authors
Picossi S, Montesinos ML, Pernil R, Lichtle C, Herrero A, Flores E
  Title
ABC-type neutral amino acid permease N-I is required for optimal diazotrophic growth and is repressed in the heterocysts of Anabaena sp. strain PCC 7120.
  Journal
Mol Microbiol 57:1582-92 (2005)
DOI:10.1111/j.1365-2958.2005.04791.x
Reference
PMID:11929526
  Authors
Valladares A, Montesinos ML, Herrero A, Flores E.
  Title
An ABC-type, high-affinity urea permease identified in cyanobacteria.
  Journal
Mol Microbiol 43:703-15 (2002)
DOI:10.1046/j.1365-2958.2002.02778.x
Reference
PMID:18326572
  Authors
Richard-Fogal CL, Frawley ER, Kranz RG
  Title
Topology and function of CcmD in cytochrome c maturation.
  Journal
J Bacteriol 190:3489-93 (2008)
DOI:10.1128/JB.00146-08
Reference
PMID:16109926
  Authors
Suzuki H, Koyanagi T, Izuka S, Onishi A, Kumagai H
  Title
The yliA, -B, -C, and -D genes of Escherichia coli K-12 encode a novel glutathione importer with an ATP-binding cassette.
  Journal
J Bacteriol 187:5861-7 (2005)
DOI:10.1128/JB.187.17.5861-5867.2005
Reference
PMID:17873039
  Authors
Novikova M, Metlitskaya A, Datsenko K, Kazakov T, Kazakov A, Wanner B, Severinov K
  Title
The Escherichia coli Yej transporter is required for the uptake of translation inhibitor microcin C.
  Journal
J Bacteriol 189:8361-5 (2007)
DOI:10.1128/JB.01028-07
Reference
PMID:17214741
  Authors
Tikhonova EB, Devroy VK, Lau SY, Zgurskaya HI
  Title
Reconstitution of the Escherichia coli macrolide transporter: the periplasmic membrane fusion protein MacA stimulates the ATPase activity of MacB.
  Journal
Mol Microbiol 63:895-910 (2007)
DOI:10.1111/j.1365-2958.2006.05549.x
Reference
PMID:18805970
  Authors
Yamanaka H, Kobayashi H, Takahashi E, Okamoto K
  Title
MacAB is involved in the secretion of Escherichia coli heat-stable enterotoxin II.
  Journal
J Bacteriol 190:7693-8 (2008)
DOI:10.1128/JB.00853-08
KO pathway
ko02010   
LinkDB

DBGET integrated database retrieval system