KEGG   PATHWAY: snem01100
Entry
snem01100                   Pathway                                
Name
Metabolic pathways - Serratia nematodiphila
Class
Pathway map
snem01100  Metabolic pathways
snem01100

Module
snem_M00001  Glycolysis (Embden-Meyerhof pathway), glucose => pyruvate [PATH:snem01100]
snem_M00002  Glycolysis, core module involving three-carbon compounds [PATH:snem01100]
snem_M00003  Gluconeogenesis, oxaloacetate => fructose-6P [PATH:snem01100]
snem_M00004  Pentose phosphate pathway (Pentose phosphate cycle) [PATH:snem01100]
snem_M00005  PRPP biosynthesis, ribose 5P => PRPP [PATH:snem01100]
snem_M00006  Pentose phosphate pathway, oxidative phase, glucose 6P => ribulose 5P [PATH:snem01100]
snem_M00007  Pentose phosphate pathway, non-oxidative phase, fructose 6P => ribose 5P [PATH:snem01100]
snem_M00008  Entner-Doudoroff pathway, glucose-6P => glyceraldehyde-3P + pyruvate [PATH:snem01100]
snem_M00009  Citrate cycle (TCA cycle, Krebs cycle) [PATH:snem01100]
snem_M00010  Citrate cycle, first carbon oxidation, oxaloacetate => 2-oxoglutarate [PATH:snem01100]
snem_M00011  Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate [PATH:snem01100]
snem_M00012  Glyoxylate cycle [PATH:snem01100]
snem_M00015  Proline biosynthesis, glutamate => proline [PATH:snem01100]
snem_M00016  Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine [PATH:snem01100]
snem_M00017  Methionine biosynthesis, aspartate => homoserine => methionine [PATH:snem01100]
snem_M00018  Threonine biosynthesis, aspartate => homoserine => threonine [PATH:snem01100]
snem_M00019  Valine/isoleucine biosynthesis, pyruvate => valine / 2-oxobutanoate => isoleucine [PATH:snem01100]
snem_M00021  Cysteine biosynthesis, serine => cysteine [PATH:snem01100]
snem_M00022  Shikimate pathway, phosphoenolpyruvate + erythrose-4P => chorismate [PATH:snem01100]
snem_M00024  Phenylalanine biosynthesis, chorismate => phenylpyruvate => phenylalanine [PATH:snem01100]
snem_M00025  Tyrosine biosynthesis, chorismate => HPP => tyrosine [PATH:snem01100]
snem_M00026  Histidine biosynthesis, PRPP => histidine [PATH:snem01100]
snem_M00028  Ornithine biosynthesis, glutamate => ornithine [PATH:snem01100]
snem_M00035  Methionine degradation [PATH:snem01100]
snem_M00050  Guanine ribonucleotide biosynthesis, IMP => GDP,GTP [PATH:snem01100]
snem_M00051  De novo pyrimidine biosynthesis, glutamine (+ PRPP) => UMP [PATH:snem01100]
snem_M00052  Pyrimidine ribonucleotide biosynthesis, UMP => UDP/UTP,CDP/CTP [PATH:snem01100]
snem_M00053  Deoxyribonucleotide biosynthesis, ADP/GDP/CDP/UDP => dATP/dGTP/dCTP/dUTP [PATH:snem01100]
snem_M00060  KDO2-lipid A biosynthesis, Raetz pathway, LpxL-LpxM type [PATH:snem01100]
snem_M00061  D-Glucuronate degradation, D-glucuronate => pyruvate + D-glyceraldehyde 3P [PATH:snem01100]
snem_M00064  ADP-L-glycero-D-manno-heptose biosynthesis [PATH:snem01100]
snem_M00083  Fatty acid biosynthesis, elongation [PATH:snem01100]
snem_M00086  beta-Oxidation, acyl-CoA synthesis [PATH:snem01100]
snem_M00087  beta-Oxidation [PATH:snem01100]
snem_M00096  C5 isoprenoid biosynthesis, non-mevalonate pathway [PATH:snem01100]
snem_M00115  NAD biosynthesis, aspartate => quinolinate => NAD [PATH:snem01100]
snem_M00117  Ubiquinone biosynthesis, prokaryotes, chorismate (+ polyprenyl-PP) => ubiquinol [PATH:snem01100]
snem_M00118  Glutathione biosynthesis, glutamate => glutathione [PATH:snem01100]
snem_M00119  Pantothenate biosynthesis, valine/L-aspartate => pantothenate [PATH:snem01100]
snem_M00120  Coenzyme A biosynthesis, pantothenate => CoA [PATH:snem01100]
snem_M00123  Biotin biosynthesis, pimeloyl-ACP/CoA => biotin [PATH:snem01100]
snem_M00125  Riboflavin biosynthesis, plants and bacteria, GTP => riboflavin/FMN/FAD [PATH:snem01100]
snem_M00126  Tetrahydrofolate biosynthesis, GTP => THF [PATH:snem01100]
snem_M00127  Thiamine biosynthesis, prokaryotes, AIR (+ DXP/tyrosine) => TMP/TPP [PATH:snem01100]
snem_M00136  GABA biosynthesis, prokaryotes, putrescine => GABA [PATH:snem01100]
snem_M00144  NADH:quinone oxidoreductase, prokaryotes [PATH:snem01100]
snem_M00149  Succinate dehydrogenase, prokaryotes [PATH:snem01100]
snem_M00150  Fumarate reductase, prokaryotes [PATH:snem01100]
snem_M00168  CAM (Crassulacean acid metabolism), dark [PATH:snem01100]
snem_M00176  Assimilatory sulfate reduction, sulfate => H2S [PATH:snem01100]
snem_M00307  Pyruvate oxidation, pyruvate => acetyl-CoA [PATH:snem01100]
snem_M00338  Cysteine biosynthesis, homocysteine + serine => cysteine [PATH:snem01100]
snem_M00364  C10-C20 isoprenoid biosynthesis, bacteria [PATH:snem01100]
snem_M00417  Cytochrome o ubiquinol oxidase [PATH:snem01100]
snem_M00432  Leucine biosynthesis, 2-oxoisovalerate => 2-oxoisocaproate [PATH:snem01100]
snem_M00530  Dissimilatory nitrate reduction, nitrate => ammonia [PATH:snem01100]
snem_M00549  Nucleotide sugar biosynthesis, glucose => UDP-glucose [PATH:snem01100]
snem_M00551  Benzoate degradation, benzoate => catechol / methylbenzoate => methylcatechol [PATH:snem01100]
snem_M00554  Nucleotide sugar biosynthesis, galactose => UDP-galactose [PATH:snem01100]
snem_M00555  Betaine biosynthesis, choline => betaine [PATH:snem01100]
snem_M00568  Catechol ortho-cleavage, catechol => 3-oxoadipate [PATH:snem01100]
snem_M00570  Isoleucine biosynthesis, threonine => 2-oxobutanoate => isoleucine [PATH:snem01100]
snem_M00579  Phosphate acetyltransferase-acetate kinase pathway, acetyl-CoA => acetate [PATH:snem01100]
snem_M00621  Glycine cleavage system [PATH:snem01100]
snem_M00622  Nicotinate degradation, nicotinate => fumarate [PATH:snem01100]
snem_M00632  Galactose degradation, Leloir pathway, galactose => alpha-D-glucose-1P [PATH:snem01100]
snem_M00761  Undecaprenylphosphate alpha-L-Ara4N biosynthesis, UDP-GlcA => undecaprenyl phosphate alpha-L-Ara4N [PATH:snem01100]
snem_M00837  Prodigiosin biosynthesis, L-proline => prodigiosin [PATH:snem01100]
snem_M00844  Arginine biosynthesis, ornithine => arginine [PATH:snem01100]
snem_M00854  Glycogen biosynthesis, glucose-1P => glycogen/starch [PATH:snem01100]
snem_M00855  Glycogen degradation, glycogen => glucose-6P [PATH:snem01100]
snem_M00878  Phenylacetate degradation, phenylaxetate => acetyl-CoA/succinyl-CoA [PATH:snem01100]
snem_M00879  Arginine succinyltransferase pathway, arginine => glutamate [PATH:snem01100]
snem_M00880  Molybdenum cofactor biosynthesis, GTP => molybdenum cofactor [PATH:snem01100]
snem_M00881  Lipoic acid biosynthesis, plants and bacteria, octanoyl-ACP => dihydrolipoyl-E2/H [PATH:snem01100]
snem_M00899  Thiamine salvage pathway, HMP/HET => TMP [PATH:snem01100]
snem_M00938  Pyrimidine deoxyribonucleotide biosynthesis, UDP => dTTP [PATH:snem01100]
snem_M00948  Hydroxyproline degradation, trans-4-hydroxy-L-proline => 2-oxoglutarate [PATH:snem01100]
snem_M00970  Proline degradation, proline => glutamate [PATH:snem01100]
Organism
Serratia nematodiphila [GN:snem]
Related
pathway
snem00010  Glycolysis / Gluconeogenesis
snem00020  Citrate cycle (TCA cycle)
snem00030  Pentose phosphate pathway
snem00040  Pentose and glucuronate interconversions
snem00051  Fructose and mannose metabolism
snem00052  Galactose metabolism
snem00053  Ascorbate and aldarate metabolism
snem00061  Fatty acid biosynthesis
snem00071  Fatty acid degradation
snem00130  Ubiquinone and other terpenoid-quinone biosynthesis
snem00190  Oxidative phosphorylation
snem00220  Arginine biosynthesis
snem00230  Purine metabolism
snem00240  Pyrimidine metabolism
snem00250  Alanine, aspartate and glutamate metabolism
snem00260  Glycine, serine and threonine metabolism
snem00261  Monobactam biosynthesis
snem00270  Cysteine and methionine metabolism
snem00280  Valine, leucine and isoleucine degradation
snem00290  Valine, leucine and isoleucine biosynthesis
snem00300  Lysine biosynthesis
snem00310  Lysine degradation
snem00330  Arginine and proline metabolism
snem00332  Carbapenem biosynthesis
snem00333  Prodigiosin biosynthesis
snem00340  Histidine metabolism
snem00350  Tyrosine metabolism
snem00360  Phenylalanine metabolism
snem00361  Chlorocyclohexane and chlorobenzene degradation
snem00362  Benzoate degradation
snem00364  Fluorobenzoate degradation
snem00380  Tryptophan metabolism
snem00400  Phenylalanine, tyrosine and tryptophan biosynthesis
snem00401  Novobiocin biosynthesis
snem00410  beta-Alanine metabolism
snem00430  Taurine and hypotaurine metabolism
snem00440  Phosphonate and phosphinate metabolism
snem00450  Selenocompound metabolism
snem00460  Cyanoamino acid metabolism
snem00470  D-Amino acid metabolism
snem00480  Glutathione metabolism
snem00500  Starch and sucrose metabolism
snem00511  Other glycan degradation
snem00520  Amino sugar and nucleotide sugar metabolism
snem00521  Streptomycin biosynthesis
snem00523  Polyketide sugar unit biosynthesis
snem00525  Acarbose and validamycin biosynthesis
snem00540  Lipopolysaccharide biosynthesis
snem00541  O-Antigen nucleotide sugar biosynthesis
snem00542  O-Antigen repeat unit biosynthesis
snem00543  Exopolysaccharide biosynthesis
snem00550  Peptidoglycan biosynthesis
snem00552  Teichoic acid biosynthesis
snem00561  Glycerolipid metabolism
snem00562  Inositol phosphate metabolism
snem00564  Glycerophospholipid metabolism
snem00565  Ether lipid metabolism
snem00591  Linoleic acid metabolism
snem00592  alpha-Linolenic acid metabolism
snem00600  Sphingolipid metabolism
snem00620  Pyruvate metabolism
snem00622  Xylene degradation
snem00623  Toluene degradation
snem00625  Chloroalkane and chloroalkene degradation
snem00626  Naphthalene degradation
snem00627  Aminobenzoate degradation
snem00630  Glyoxylate and dicarboxylate metabolism
snem00633  Nitrotoluene degradation
snem00640  Propanoate metabolism
snem00650  Butanoate metabolism
snem00660  C5-Branched dibasic acid metabolism
snem00670  One carbon pool by folate
snem00680  Methane metabolism
snem00710  Carbon fixation by Calvin cycle
snem00720  Other carbon fixation pathways
snem00730  Thiamine metabolism
snem00740  Riboflavin metabolism
snem00750  Vitamin B6 metabolism
snem00760  Nicotinate and nicotinamide metabolism
snem00770  Pantothenate and CoA biosynthesis
snem00780  Biotin metabolism
snem00785  Lipoic acid metabolism
snem00790  Folate biosynthesis
snem00791  Atrazine degradation
snem00860  Porphyrin metabolism
snem00900  Terpenoid backbone biosynthesis
snem00907  Pinene, camphor and geraniol degradation
snem00910  Nitrogen metabolism
snem00920  Sulfur metabolism
snem00930  Caprolactam degradation
snem00946  Degradation of flavonoids
snem00997  Biosynthesis of various other secondary metabolites
snem00999  Biosynthesis of various plant secondary metabolites
snem01040  Biosynthesis of unsaturated fatty acids
snem01053  Biosynthesis of siderophore group nonribosomal peptides
KO pathway
ko01100   
LinkDB

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