PATHWAY: sod01100 Help Entry sod01100                    Pathway                                 Name Metabolic pathways - Sodalis praecaptivus Class BRITE hierarchy Pathway map sod01100   Metabolic pathways Module sod_M00001   Glycolysis (Embden-Meyerhof pathway), glucose => pyruvate [PATH:sod01100] sod_M00002   Glycolysis, core module involving three-carbon compounds [PATH:sod01100] sod_M00003   Gluconeogenesis, oxaloacetate => fructose-6P [PATH:sod01100] sod_M00004   Pentose phosphate pathway (Pentose phosphate cycle) [PATH:sod01100] sod_M00005   PRPP biosynthesis, ribose 5P => PRPP [PATH:sod01100] sod_M00006   Pentose phosphate pathway, oxidative phase, glucose 6P => ribulose 5P [PATH:sod01100] sod_M00007   Pentose phosphate pathway, non-oxidative phase, fructose 6P => ribose 5P [PATH:sod01100] sod_M00008   Entner-Doudoroff pathway, glucose-6P => glyceraldehyde-3P + pyruvate [PATH:sod01100] sod_M00009   Citrate cycle (TCA cycle, Krebs cycle) [PATH:sod01100] sod_M00010   Citrate cycle, first carbon oxidation, oxaloacetate => 2-oxoglutarate [PATH:sod01100] sod_M00011   Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate [PATH:sod01100] sod_M00015   Proline biosynthesis, glutamate => proline [PATH:sod01100] sod_M00016   Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine [PATH:sod01100] sod_M00017   Methionine biosynthesis, aspartate => homoserine => methionine [PATH:sod01100] sod_M00018   Threonine biosynthesis, aspartate => homoserine => threonine [PATH:sod01100] sod_M00019   Valine/isoleucine biosynthesis, pyruvate => valine / 2-oxobutanoate => isoleucine [PATH:sod01100] sod_M00020   Serine biosynthesis, glycerate-3P => serine [PATH:sod01100] sod_M00021   Cysteine biosynthesis, serine => cysteine [PATH:sod01100] sod_M00022   Shikimate pathway, phosphoenolpyruvate + erythrose-4P => chorismate [PATH:sod01100] sod_M00023   Tryptophan biosynthesis, chorismate => tryptophan [PATH:sod01100] sod_M00024   Phenylalanine biosynthesis, chorismate => phenylpyruvate => phenylalanine [PATH:sod01100] sod_M00025   Tyrosine biosynthesis, chorismate => HPP => tyrosine [PATH:sod01100] sod_M00026   Histidine biosynthesis, PRPP => histidine [PATH:sod01100] sod_M00028   Ornithine biosynthesis, glutamate => ornithine [PATH:sod01100] sod_M00034   Methionine salvage pathway [PATH:sod01100] sod_M00045   Histidine degradation, histidine => N-formiminoglutamate => glutamate [PATH:sod01100] sod_M00048   De novo purine biosynthesis, PRPP + glutamine => IMP [PATH:sod01100] sod_M00049   Adenine ribonucleotide biosynthesis, IMP => ADP,ATP [PATH:sod01100] sod_M00050   Guanine ribonucleotide biosynthesis, IMP => GDP,GTP [PATH:sod01100] sod_M00051   De novo pyrimidine biosynthesis, glutamine (+ PRPP) => UMP [PATH:sod01100] sod_M00052   Pyrimidine ribonucleotide biosynthesis, UMP => UDP/UTP,CDP/CTP [PATH:sod01100] sod_M00053   Deoxyribonucleotide biosynthesis, ADP/GDP/CDP/UDP => dATP/dGTP/dCTP/dUTP [PATH:sod01100] sod_M00060   KDO2-lipid A biosynthesis, Raetz pathway, LpxL-LpxM type [PATH:sod01100] sod_M00061   D-Glucuronate degradation, D-glucuronate => pyruvate + D-glyceraldehyde 3P [PATH:sod01100] sod_M00063   CMP-KDO biosynthesis [PATH:sod01100] sod_M00064   ADP-L-glycero-D-manno-heptose biosynthesis [PATH:sod01100] sod_M00082   Fatty acid biosynthesis, initiation [PATH:sod01100] sod_M00083   Fatty acid biosynthesis, elongation [PATH:sod01100] sod_M00086   beta-Oxidation, acyl-CoA synthesis [PATH:sod01100] sod_M00093   Phosphatidylethanolamine (PE) biosynthesis, PA => PS => PE [PATH:sod01100] sod_M00096   C5 isoprenoid biosynthesis, non-mevalonate pathway [PATH:sod01100] sod_M00115   NAD biosynthesis, aspartate => quinolinate => NAD [PATH:sod01100] sod_M00116   Menaquinone biosynthesis, chorismate (+ polyprenyl-PP) => menaquinol [PATH:sod01100] sod_M00117   Ubiquinone biosynthesis, prokaryotes, chorismate (+ polyprenyl-PP) => ubiquinol [PATH:sod01100] sod_M00118   Glutathione biosynthesis, glutamate => glutathione [PATH:sod01100] sod_M00119   Pantothenate biosynthesis, valine/L-aspartate => pantothenate [PATH:sod01100] sod_M00120   Coenzyme A biosynthesis, pantothenate => CoA [PATH:sod01100] sod_M00121   Heme biosynthesis, plants and bacteria, glutamate => heme [PATH:sod01100] sod_M00123   Biotin biosynthesis, pimeloyl-ACP/CoA => biotin [PATH:sod01100] sod_M00125   Riboflavin biosynthesis, plants and bacteria, GTP => riboflavin/FMN/FAD [PATH:sod01100] sod_M00126   Tetrahydrofolate biosynthesis, GTP => THF [PATH:sod01100] sod_M00127   Thiamine biosynthesis, prokaryotes, AIR (+ DXP/tyrosine) => TMP/TPP [PATH:sod01100] sod_M00133   Polyamine biosynthesis, arginine => agmatine => putrescine => spermidine [PATH:sod01100] sod_M00144   NADH:quinone oxidoreductase, prokaryotes [PATH:sod01100] sod_M00149   Succinate dehydrogenase, prokaryotes [PATH:sod01100] sod_M00150   Fumarate reductase, prokaryotes [PATH:sod01100] sod_M00157   F-type ATPase, prokaryotes and chloroplasts [PATH:sod01100] sod_M00168   CAM (Crassulacean acid metabolism), dark [PATH:sod01100] sod_M00176   Assimilatory sulfate reduction, sulfate => H2S [PATH:sod01100] sod_M00307   Pyruvate oxidation, pyruvate => acetyl-CoA [PATH:sod01100] sod_M00345   Formaldehyde assimilation, ribulose monophosphate pathway [PATH:sod01100] sod_M00364   C10-C20 isoprenoid biosynthesis, bacteria [PATH:sod01100] sod_M00417   Cytochrome o ubiquinol oxidase [PATH:sod01100] sod_M00432   Leucine biosynthesis, 2-oxoisovalerate => 2-oxoisocaproate [PATH:sod01100] sod_M00531   Assimilatory nitrate reduction, nitrate => ammonia [PATH:sod01100] sod_M00549   Nucleotide sugar biosynthesis, glucose => UDP-glucose [PATH:sod01100] sod_M00552   D-galactonate degradation, De Ley-Doudoroff pathway, D-galactonate => glycerate-3P [PATH:sod01100] sod_M00554   Nucleotide sugar biosynthesis, galactose => UDP-galactose [PATH:sod01100] sod_M00565   Trehalose biosynthesis, D-glucose 1P => trehalose [PATH:sod01100] sod_M00570   Isoleucine biosynthesis, threonine => 2-oxobutanoate => isoleucine [PATH:sod01100] sod_M00572   Pimeloyl-ACP biosynthesis, BioC-BioH pathway, malonyl-ACP => pimeloyl-ACP [PATH:sod01100] sod_M00579   Phosphate acetyltransferase-acetate kinase pathway, acetyl-CoA => acetate [PATH:sod01100] sod_M00580   Pentose phosphate pathway, archaea, fructose 6P => ribose 5P [PATH:sod01100] sod_M00621   Glycine cleavage system [PATH:sod01100] sod_M00631   D-Galacturonate degradation (bacteria), D-galacturonate => pyruvate + D-glyceraldehyde 3P [PATH:sod01100] sod_M00632   Galactose degradation, Leloir pathway, galactose => alpha-D-glucose-1P [PATH:sod01100] sod_M00761   Undecaprenylphosphate alpha-L-Ara4N biosynthesis, UDP-GlcA => undecaprenyl phosphate alpha-L-Ara4N [PATH:sod01100] sod_M00844   Arginine biosynthesis, ornithine => arginine [PATH:sod01100] sod_M00846   Siroheme biosynthesis, glutamyl-tRNA => siroheme [PATH:sod01100] sod_M00854   Glycogen biosynthesis, glucose-1P => glycogen/starch [PATH:sod01100] sod_M00855   Glycogen degradation, glycogen => glucose-6P [PATH:sod01100] sod_M00880   Molybdenum cofactor biosynthesis, GTP => molybdenum cofactor [PATH:sod01100] sod_M00881   Lipoic acid biosynthesis, plants and bacteria, octanoyl-ACP => dihydrolipoyl-E2/H [PATH:sod01100] sod_M00899   Thiamine salvage pathway, HMP/HET => TMP [PATH:sod01100] sod_M00909   UDP-N-acetyl-D-glucosamine biosynthesis, prokaryotes, glucose => UDP-GlcNAc [PATH:sod01100] sod_M00938   Pyrimidine deoxyribonucleotide biosynthesis, UDP => dTTP [PATH:sod01100] sod_M00958   Adenine ribonucleotide degradation, AMP => Urate [PATH:sod01100] sod_M00959   Guanine ribonucleotide degradation, GMP => Urate [PATH:sod01100] sod_M00970   Proline degradation, proline => glutamate [PATH:sod01100] Organism Sodalis praecaptivus [GN:sod] Related pathway sod00010   Glycolysis / Gluconeogenesis sod00020   Citrate cycle (TCA cycle) sod00030   Pentose phosphate pathway sod00040   Pentose and glucuronate interconversions sod00051   Fructose and mannose metabolism sod00052   Galactose metabolism sod00053   Ascorbate and aldarate metabolism sod00061   Fatty acid biosynthesis sod00071   Fatty acid degradation sod00130   Ubiquinone and other terpenoid-quinone biosynthesis sod00190   Oxidative phosphorylation sod00220   Arginine biosynthesis sod00230   Purine metabolism sod00240   Pyrimidine metabolism sod00250   Alanine, aspartate and glutamate metabolism sod00260   Glycine, serine and threonine metabolism sod00261   Monobactam biosynthesis sod00270   Cysteine and methionine metabolism sod00280   Valine, leucine and isoleucine degradation sod00290   Valine, leucine and isoleucine biosynthesis sod00300   Lysine biosynthesis sod00310   Lysine degradation sod00330   Arginine and proline metabolism sod00332   Carbapenem biosynthesis sod00340   Histidine metabolism sod00350   Tyrosine metabolism sod00360   Phenylalanine metabolism sod00361   Chlorocyclohexane and chlorobenzene degradation sod00362   Benzoate degradation sod00364   Fluorobenzoate degradation sod00380   Tryptophan metabolism sod00400   Phenylalanine, tyrosine and tryptophan biosynthesis sod00401   Novobiocin biosynthesis sod00410   beta-Alanine metabolism sod00430   Taurine and hypotaurine metabolism sod00440   Phosphonate and phosphinate metabolism sod00450   Selenocompound metabolism sod00460   Cyanoamino acid metabolism sod00470   D-Amino acid metabolism sod00480   Glutathione metabolism sod00500   Starch and sucrose metabolism sod00511   Other glycan degradation sod00520   Amino sugar and nucleotide sugar metabolism sod00521   Streptomycin biosynthesis sod00523   Polyketide sugar unit biosynthesis sod00525   Acarbose and validamycin biosynthesis sod00540   Lipopolysaccharide biosynthesis sod00541   O-Antigen nucleotide sugar biosynthesis sod00542   O-Antigen repeat unit biosynthesis sod00543   Exopolysaccharide biosynthesis sod00550   Peptidoglycan biosynthesis sod00552   Teichoic acid biosynthesis sod00561   Glycerolipid metabolism sod00562   Inositol phosphate metabolism sod00564   Glycerophospholipid metabolism sod00565   Ether lipid metabolism sod00592   alpha-Linolenic acid metabolism sod00600   Sphingolipid metabolism sod00620   Pyruvate metabolism sod00623   Toluene degradation sod00625   Chloroalkane and chloroalkene degradation sod00626   Naphthalene degradation sod00627   Aminobenzoate degradation sod00630   Glyoxylate and dicarboxylate metabolism sod00640   Propanoate metabolism sod00643   Styrene degradation sod00650   Butanoate metabolism sod00660   C5-Branched dibasic acid metabolism sod00670   One carbon pool by folate sod00680   Methane metabolism sod00730   Thiamine metabolism sod00740   Riboflavin metabolism sod00750   Vitamin B6 metabolism sod00760   Nicotinate and nicotinamide metabolism sod00770   Pantothenate and CoA biosynthesis sod00780   Biotin metabolism sod00785   Lipoic acid metabolism sod00790   Folate biosynthesis sod00860   Porphyrin metabolism sod00900   Terpenoid backbone biosynthesis sod00903   Limonene degradation sod00910   Nitrogen metabolism sod00920   Sulfur metabolism sod00930   Caprolactam degradation sod00946   Degradation of flavonoids sod00998   Biosynthesis of various antibiotics sod00999   Biosynthesis of various plant secondary metabolites sod01040   Biosynthesis of unsaturated fatty acids KO pathway ko01100     LinkDB All DBs

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