KEGG   PATHWAY: soy03060
Entry
soy03060                    Pathway                                
Name
Protein export - Sitophilus oryzae (rice weevil)
Description
The protein export is the active transport of proteins from the cytoplasm to the exterior of the cell, or to the periplasmic compartment in Gram-negative bacteria. The sec dependent pathway is the general protein export system that transports newly synthesized proteins into or across the cell membrane. The translocation channel is formed from a conserved trimeric membrane protein complex, called the Sec61/SecY complex. The twin-arginine translocation (Tat) pathway is another protein transport system that transports folded proteins in bacteria, archaea, and chloroplasts. Many Tat systems comprise three functionally different membrane proteins, TatA, TatB, and TatC, but TatA and TatE seem to have overlapping functions, with TatA having by far the more important role.
Class
Genetic Information Processing; Folding, sorting and degradation
Pathway map
soy03060  Protein export
soy03060

Other DBs
GO: 0043952 0043953
Organism
Sitophilus oryzae (rice weevil) [GN:soy]
Gene
115877870  mitochondrial inner membrane protein OXA1L isoform X1 [KO:K03217]
115877123  signal recognition particle 54 kDa protein [KO:K03106] [EC:3.6.5.4]
115886579  protein transport protein Sec61 subunit alpha [KO:K10956]
115881283  protein transport protein Sec61 subunit beta [KO:K09481]
115874263  translocation protein SEC62 [KO:K12275]
115877494  translocation protein SEC63 homolog [KO:K09540]
115882663  endoplasmic reticulum chaperone BiP [KO:K09490] [EC:3.6.4.10]
115885355  signal recognition particle 14 kDa protein [KO:K03104]
115876612  signal recognition particle subunit SRP72 [KO:K03108]
115874361  signal recognition particle subunit SRP68 [KO:K03107]
115891773  signal recognition particle 19 kDa protein [KO:K03105]
115876421  signal recognition particle receptor subunit alpha homolog [KO:K13431]
115878785  signal recognition particle receptor subunit beta [KO:K12272]
115874670  ATPase ASNA1 homolog [KO:K01551] [EC:7.3.2.7 7.3.-.-]
115881778  Golgi to ER traffic protein 4 homolog [KO:K23387]
115884297  ubiquitin-like protein 4A [KO:K23388]
115878160  large proline-rich protein bag6-A isoform X1 [KO:K23390]
115887164  small glutamine-rich tetratricopeptide repeat-containing protein alpha-like [KO:K16365]
115886410  protein GET1 [KO:K22384]
115887486  transmembrane protein 208 [KO:K27164]
115875617  signal peptidase complex subunit 1 [KO:K12946] [EC:3.4.-.-]
115875170  probable signal peptidase complex subunit 2 [KO:K12947] [EC:3.4.-.-]
115874921  signal peptidase complex subunit 3 [KO:K12948] [EC:3.4.-.-]
115886006  signal peptidase complex catalytic subunit SEC11A [KO:K13280] [EC:3.4.21.89]
115878269  mitochondrial inner membrane protease subunit 1 [KO:K09647] [EC:3.4.21.-]
Reference
  Authors
Dalbey RE, Robinson C.
  Title
Protein translocation into and across the bacterial plasma membrane and the plant thylakoid membrane.
  Journal
Trends Biochem Sci 24:17-22 (1999)
DOI:10.1016/S0968-0004(98)01333-4
Reference
  Authors
Berks BC, Sargent F, Palmer T.
  Title
The Tat protein export pathway.
  Journal
Mol Microbiol 35:260-74 (2000)
DOI:10.1046/j.1365-2958.2000.01719.x
Reference
  Authors
Wexler M, Sargent F, Jack RL, Stanley NR, Bogsch EG, Robinson C, Berks BC, Palmer T.
  Title
TatD is a cytoplasmic protein with DNase activity. No requirement for TatD family proteins in sec-independent protein export.
  Journal
J Biol Chem 275:16717-22 (2000)
DOI:10.1074/jbc.M000800200
Reference
  Authors
Jongbloed JD, Martin U, Antelmann H, Hecker M, Tjalsma H, Venema G, Bron S, van Dijl JM, Muller J.
  Title
TatC is a specificity determinant for protein secretion via the twin-arginine translocation pathway.
  Journal
J Biol Chem 275:41350-7 (2000)
DOI:10.1074/jbc.M004887200
Reference
  Authors
Rapoport TA
  Title
Protein translocation across the eukaryotic endoplasmic reticulum and bacterial plasma membranes.
  Journal
Nature 450:663-9 (2007)
DOI:10.1038/nature06384
Reference
  Authors
Flower AM
  Title
The SecY translocation complex: convergence of genetics and structure.
  Journal
Trends Microbiol 15:203-10 (2007)
DOI:10.1016/j.tim.2007.03.001
Reference
  Authors
Osborne AR, Rapoport TA, van den Berg B
  Title
Protein translocation by the Sec61/SecY channel.
  Journal
Annu Rev Cell Dev Biol 21:529-50 (2005)
DOI:10.1146/annurev.cellbio.21.012704.133214
Reference
  Authors
Paetzel M, Karla A, Strynadka NC, Dalbey RE
  Title
Signal peptidases.
  Journal
Chem Rev 102:4549-80 (2002)
DOI:10.1021/cr010166y
Reference
  Authors
Paetzel M, Dalbey RE, Strynadka NC
  Title
The structure and mechanism of bacterial type I signal peptidases. A novel antibiotic target.
  Journal
Pharmacol Ther 87:27-49 (2000)
DOI:10.1016/S0163-7258(00)00064-4
Reference
  Authors
Ng SY, Chaban B, VanDyke DJ, Jarrell KF
  Title
Archaeal signal peptidases.
  Journal
Microbiology 153:305-14 (2007)
DOI:10.1099/mic.0.2006/003087-0
Reference
  Authors
Desvaux M, Hebraud M, Talon R, Henderson IR
  Title
Secretion and subcellular localizations of bacterial proteins: a semantic awareness issue.
  Journal
Trends Microbiol 17:139-45 (2009)
DOI:10.1016/j.tim.2009.01.004
Reference
  Authors
Nakatogawa H, Murakami A, Ito K
  Title
Control of SecA and SecM translation by protein secretion.
  Journal
Curr Opin Microbiol 7:145-50 (2004)
DOI:10.1016/j.mib.2004.01.001
KO pathway
ko03060   
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