KEGG   PATHWAY: spe00630
Entry
spe00630                    Pathway                                
Name
Glyoxylate and dicarboxylate metabolism - Serratia proteamaculans
Class
Metabolism; Carbohydrate metabolism
Pathway map
spe00630  Glyoxylate and dicarboxylate metabolism
spe00630

Module
spe_M00012  Glyoxylate cycle [PATH:spe00630]
spe_M00621  Glycine cleavage system [PATH:spe00630]
Other DBs
GO: 0046487 0043648
Organism
Serratia proteamaculans [GN:spe]
Gene
Spro_4502  isocitrate lyase [KO:K01637] [EC:4.1.3.1]
Spro_0297  acetate--CoA ligase [KO:K01895] [EC:6.2.1.1]
Spro_4503  malate synthase A [KO:K01638] [EC:2.3.3.9]
Spro_0469  malate dehydrogenase, NAD-dependent [KO:K00024] [EC:1.1.1.37]
Spro_1262  citrate synthase I [KO:K01647] [EC:2.3.3.1]
Spro_2654  aconitate hydratase 1 [KO:K01681] [EC:4.2.1.3]
Spro_4008  aconitate hydratase 2 [KO:K01682] [EC:4.2.1.3 4.2.1.99]
Spro_0592  acetyl-CoA acetyltransferase [KO:K00626] [EC:2.3.1.9]
Spro_4857  acetyl-CoA acetyltransferase [KO:K00626] [EC:2.3.1.9]
Spro_0377  Catalase [KO:K03781] [EC:1.11.1.6]
Spro_3278  Catalase [KO:K03781] [EC:1.11.1.6]
Spro_1933  D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding [KO:K12972] [EC:1.1.1.79 1.1.1.81]
Spro_0057  D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding [KO:K00090] [EC:1.1.1.79 1.1.1.81 1.1.1.215]
Spro_1697  HAD-superfamily hydrolase, subfamily IA, variant 3 [KO:K01091] [EC:3.1.3.18]
Spro_4600  phosphoglycolate phosphatase [KO:K01091] [EC:3.1.3.18]
Spro_4881  glutamine synthetase, type I [KO:K01915] [EC:6.3.1.2]
Spro_3638  Glycine hydroxymethyltransferase [KO:K00600] [EC:2.1.2.1]
Spro_3914  glycine dehydrogenase [KO:K00281] [EC:1.4.4.2]
Spro_3916  glycine cleavage system T protein [KO:K00605] [EC:2.1.2.10]
Spro_4009  dihydrolipoamide dehydrogenase [KO:K00382] [EC:1.8.1.4]
Spro_4777  pyridine nucleotide-disulphide oxidoreductase dimerisation region [KO:K00382] [EC:1.8.1.4]
Spro_3915  glycine cleavage system H protein [KO:K02437]
Spro_2394  Xylose isomerase domain protein TIM barrel [KO:K01816] [EC:5.3.1.22]
Spro_1142  Glycerate kinase [KO:K00865] [EC:2.7.1.165]
Spro_2767  2-dehydro-3-deoxyphosphogluconate aldolase/4-hydroxy-2-oxoglutarate aldolase [KO:K01625] [EC:4.1.2.14 4.1.3.42]
Spro_4500  2-dehydro-3-deoxyphosphogluconate aldolase/4-hydroxy-2-oxoglutarate aldolase [KO:K01625] [EC:4.1.2.14 4.1.3.42]
Spro_2322  Oxalate decarboxylase [KO:K01569] [EC:4.1.1.2]
Spro_0084  formate dehydrogenase, alpha subunit [KO:K00123] [EC:1.17.1.9]
Spro_0083  molybdopterin oxidoreductase Fe4S4 region [KO:K00123] [EC:1.17.1.9]
Spro_0085  formate dehydrogenase, beta subunit [KO:K00124]
Spro_0086  formate dehydrogenase, gamma subunit [KO:K00127]
Spro_2366  putative esterase [KO:K01432] [EC:3.5.1.9]
Spro_3090  esterase/lipase-like protein [KO:K01432] [EC:3.5.1.9]
Spro_2713  formyltetrahydrofolate deformylase [KO:K01433] [EC:3.5.1.10]
Spro_2076  N-formylglutamate amidohydrolase [KO:K01458] [EC:3.5.1.68]
Compound
C00007  Oxygen
C00011  CO2
C00014  Ammonia
C00022  Pyruvate
C00024  Acetyl-CoA
C00025  L-Glutamate
C00026  2-Oxoglutarate
C00027  Hydrogen peroxide
C00033  Acetate
C00036  Oxaloacetate
C00037  Glycine
C00042  Succinate
C00048  Glyoxylate
C00058  Formate
C00064  L-Glutamine
C00065  L-Serine
C00091  Succinyl-CoA
C00100  Propanoyl-CoA
C00111  Glycerone phosphate
C00136  Butanoyl-CoA
C00149  (S)-Malate
C00158  Citrate
C00160  Glycolate
C00168  Hydroxypyruvate
C00197  3-Phospho-D-glycerate
C00209  Oxalate
C00258  D-Glycerate
C00266  Glycolaldehyde
C00311  Isocitrate
C00313  Oxalyl-CoA
C00332  Acetoacetyl-CoA
C00417  cis-Aconitate
C00552  meso-Tartaric acid
C00631  2-Phospho-D-glycerate
C00683  (S)-Methylmalonyl-CoA
C00798  Formyl-CoA
C00877  Crotonoyl-CoA
C00888  Pentanoyl-CoA
C00898  (R,R)-Tartaric acid
C00975  Dihydroxyfumarate
C00988  2-Phosphoglycolate
C01127  4-Hydroxy-2-oxoglutarate
C01146  2-Hydroxy-3-oxopropanoate
C01182  D-Ribulose 1,5-bisphosphate
C01213  (R)-Methylmalonyl-CoA
C01380  Ethylene glycol
C01732  Mesaconate
C01989  3-Ethylmalate
C01990  3-Oxalomalate
C02123  3-Propylmalate
C02405  Formyl phosphate
C03217  2-Hydroxy-3-oxoadipate
C03459  2-Hydroxy-3-oxosuccinate
C03548  trans-2,3-Epoxysuccinate
C03561  (R)-3-Hydroxybutanoyl-CoA
C03618  L-threo-3-Methylaspartate
C04348  L-Malyl-CoA
C06027  L-erythro-3-Methylmalyl-CoA
C06028  2-Methylfumaryl-CoA
C06049  N-Formylderivatives
C18026  (2S)-Ethylmalonyl-CoA
C18324  (2S)-Methylsuccinyl-CoA
C20238  (2R)-Ethylmalonyl-CoA
C22337  D-Ribulose 1-phosphate
Reference
PMID:10978349
  Authors
Njau RK, Herndon CA, Hawes JW.
  Title
Novel beta-hydroxyacid dehydrogenases in Escherichia coli and Haemophilus influenzae.
  Journal
J Biol Chem 275:38780-6 (2000)
DOI:10.1074/jbc.M007432200
Reference
PMID:18065535
  Authors
Zarzycki J, Schlichting A, Strychalsky N, Muller M, Alber BE, Fuchs G
  Title
Mesaconyl-coenzyme A hydratase, a new enzyme of two central carbon metabolic pathways in bacteria.
  Journal
J Bacteriol 190:1366-74 (2008)
DOI:10.1128/JB.01621-07
Reference
PMID:18819910
  Authors
Erb TJ, Retey J, Fuchs G, Alber BE
  Title
Ethylmalonyl-CoA mutase from Rhodobacter sphaeroides defines a new subclade of coenzyme B12-dependent acyl-CoA mutases.
  Journal
J Biol Chem 283:32283-93 (2008)
DOI:10.1074/jbc.M805527200
Reference
PMID:9596633
  Authors
Coschigano KT, Melo-Oliveira R, Lim J, Coruzzi GM
  Title
Arabidopsis gls mutants and distinct Fd-GOGAT genes. Implications for photorespiration and primary nitrogen assimilation.
  Journal
Plant Cell 10:741-52 (1998)
DOI:10.1105/tpc.10.5.741
Reference
PMID:16407450
  Authors
Masclaux-Daubresse C, Reisdorf-Cren M, Pageau K, Lelandais M, Grandjean O, Kronenberger J, Valadier MH, Feraud M, Jouglet T, Suzuki A
  Title
Glutamine synthetase-glutamate synthase pathway and glutamate dehydrogenase play distinct roles in the sink-source nitrogen cycle in tobacco.
  Journal
Plant Physiol 140:444-56 (2006)
DOI:10.1104/pp.105.071910
Reference
PMID:21252347
  Authors
Khomyakova M, Bukmez O, Thomas LK, Erb TJ, Berg IA
  Title
A methylaspartate cycle in haloarchaea.
  Journal
Science 331:334-7 (2011)
DOI:10.1126/science.1196544
Reference
PMID:11513957
  Authors
Serrano JA, Bonete MJ
  Title
Sequencing, phylogenetic and transcriptional analysis of the glyoxylate bypass operon (ace) in the halophilic archaeon Haloferax volcanii.
  Journal
Biochim Biophys Acta 1520:154-62 (2001)
DOI:10.1016/S0167-4781(01)00263-9
Related
pathway
spe00010  Glycolysis / Gluconeogenesis
spe00020  Citrate cycle (TCA cycle)
spe00030  Pentose phosphate pathway
spe00053  Ascorbate and aldarate metabolism
spe00071  Fatty acid degradation
spe00230  Purine metabolism
spe00250  Alanine, aspartate and glutamate metabolism
spe00260  Glycine, serine and threonine metabolism
spe00620  Pyruvate metabolism
spe00750  Vitamin B6 metabolism
spe00910  Nitrogen metabolism
KO pathway
ko00630   
LinkDB

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