PATHWAY: spen01100 Help Entry spen01100                   Pathway                                 Name Metabolic pathways - Solanum pennellii Class BRITE hierarchy Pathway map spen01100   Metabolic pathways Module spen_M00001   Glycolysis (Embden-Meyerhof pathway), glucose => pyruvate [PATH:spen01100] spen_M00002   Glycolysis, core module involving three-carbon compounds [PATH:spen01100] spen_M00003   Gluconeogenesis, oxaloacetate => fructose-6P [PATH:spen01100] spen_M00004   Pentose phosphate pathway (Pentose phosphate cycle) [PATH:spen01100] spen_M00005   PRPP biosynthesis, ribose 5P => PRPP [PATH:spen01100] spen_M00006   Pentose phosphate pathway, oxidative phase, glucose 6P => ribulose 5P [PATH:spen01100] spen_M00007   Pentose phosphate pathway, non-oxidative phase, fructose 6P => ribose 5P [PATH:spen01100] spen_M00009   Citrate cycle (TCA cycle, Krebs cycle) [PATH:spen01100] spen_M00010   Citrate cycle, first carbon oxidation, oxaloacetate => 2-oxoglutarate [PATH:spen01100] spen_M00011   Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate [PATH:spen01100] spen_M00012   Glyoxylate cycle [PATH:spen01100] spen_M00015   Proline biosynthesis, glutamate => proline [PATH:spen01100] spen_M00018   Threonine biosynthesis, aspartate => homoserine => threonine [PATH:spen01100] spen_M00019   Valine/isoleucine biosynthesis, pyruvate => valine / 2-oxobutanoate => isoleucine [PATH:spen01100] spen_M00020   Serine biosynthesis, glycerate-3P => serine [PATH:spen01100] spen_M00021   Cysteine biosynthesis, serine => cysteine [PATH:spen01100] spen_M00022   Shikimate pathway, phosphoenolpyruvate + erythrose-4P => chorismate [PATH:spen01100] spen_M00023   Tryptophan biosynthesis, chorismate => tryptophan [PATH:spen01100] spen_M00026   Histidine biosynthesis, PRPP => histidine [PATH:spen01100] spen_M00027   GABA (gamma-Aminobutyrate) shunt [PATH:spen01100] spen_M00028   Ornithine biosynthesis, glutamate => ornithine [PATH:spen01100] spen_M00034   Methionine salvage pathway [PATH:spen01100] spen_M00036   Leucine degradation, leucine => acetoacetate + acetyl-CoA [PATH:spen01100] spen_M00039   Monolignol biosynthesis, phenylalanine/tyrosine => monolignol [PATH:spen01100] spen_M00040   Tyrosine biosynthesis, chorismate => arogenate => tyrosine [PATH:spen01100] spen_M00044   Tyrosine degradation, tyrosine => homogentisate [PATH:spen01100] spen_M00046   Pyrimidine degradation, uracil => beta-alanine, thymine => 3-aminoisobutanoate [PATH:spen01100] spen_M00048   De novo purine biosynthesis, PRPP + glutamine => IMP [PATH:spen01100] spen_M00049   Adenine ribonucleotide biosynthesis, IMP => ADP,ATP [PATH:spen01100] spen_M00050   Guanine ribonucleotide biosynthesis, IMP => GDP,GTP [PATH:spen01100] spen_M00052   Pyrimidine ribonucleotide biosynthesis, UMP => UDP/UTP,CDP/CTP [PATH:spen01100] spen_M00053   Deoxyribonucleotide biosynthesis, ADP/GDP/CDP/UDP => dATP/dGTP/dCTP/dUTP [PATH:spen01100] spen_M00055   N-glycan precursor biosynthesis [PATH:spen01100] spen_M00073   N-glycan precursor trimming [PATH:spen01100] spen_M00081   Pectin degradation [PATH:spen01100] spen_M00082   Fatty acid biosynthesis, initiation [PATH:spen01100] spen_M00083   Fatty acid biosynthesis, elongation [PATH:spen01100] spen_M00086   beta-Oxidation, acyl-CoA synthesis [PATH:spen01100] spen_M00087   beta-Oxidation [PATH:spen01100] spen_M00089   Triacylglycerol biosynthesis [PATH:spen01100] spen_M00092   Phosphatidylethanolamine (PE) biosynthesis, ethanolamine => PE [PATH:spen01100] spen_M00095   C5 isoprenoid biosynthesis, mevalonate pathway [PATH:spen01100] spen_M00096   C5 isoprenoid biosynthesis, non-mevalonate pathway [PATH:spen01100] spen_M00097   beta-Carotene biosynthesis, GGAP => beta-carotene [PATH:spen01100] spen_M00098   Acylglycerol degradation [PATH:spen01100] spen_M00100   Sphingosine degradation [PATH:spen01100] spen_M00112   Tocopherol/tocotorienol biosynthesis, homogentisate + phytyl/geranylgeranyl-PP => tocopherol/tocotorienol [PATH:spen01100] spen_M00113   Jasmonic acid biosynthesis [PATH:spen01100] spen_M00114   Ascorbate biosynthesis, plants, fructose-6P => ascorbate [PATH:spen01100] spen_M00115   NAD biosynthesis, aspartate => quinolinate => NAD [PATH:spen01100] spen_M00118   Glutathione biosynthesis, glutamate => glutathione [PATH:spen01100] spen_M00120   Coenzyme A biosynthesis, pantothenate => CoA [PATH:spen01100] spen_M00121   Heme biosynthesis, plants and bacteria, glutamate => heme [PATH:spen01100] spen_M00123   Biotin biosynthesis, pimeloyl-ACP/CoA => biotin [PATH:spen01100] spen_M00125   Riboflavin biosynthesis, plants and bacteria, GTP => riboflavin/FMN/FAD [PATH:spen01100] spen_M00132   Inositol phosphate metabolism, Ins(1,3,4)P3 => phytate [PATH:spen01100] spen_M00134   Polyamine biosynthesis, arginine => ornithine => putrescine [PATH:spen01100] spen_M00137   Flavanone biosynthesis, phenylalanine => naringenin [PATH:spen01100] spen_M00138   Flavonoid biosynthesis, naringenin => pelargonidin [PATH:spen01100] spen_M00142   NADH:ubiquinone oxidoreductase, mitochondria [PATH:spen01100] spen_M00143   NADH dehydrogenase (ubiquinone) Fe-S protein/flavoprotein complex, mitochondria [PATH:spen01100] spen_M00145   NAD(P)H:quinone oxidoreductase, chloroplasts and cyanobacteria [PATH:spen01100] spen_M00148   Succinate dehydrogenase (ubiquinone) [PATH:spen01100] spen_M00151   Cytochrome bc1 complex respiratory unit [PATH:spen01100] spen_M00157   F-type ATPase, prokaryotes and chloroplasts [PATH:spen01100] spen_M00161   Photosystem II [PATH:spen01100] spen_M00163   Photosystem I [PATH:spen01100] spen_M00165   Reductive pentose phosphate cycle (Calvin cycle) [PATH:spen01100] spen_M00168   CAM (Crassulacean acid metabolism), dark [PATH:spen01100] spen_M00169   CAM (Crassulacean acid metabolism), light [PATH:spen01100] spen_M00170   C4-dicarboxylic acid cycle, phosphoenolpyruvate carboxykinase type [PATH:spen01100] spen_M00171   C4-dicarboxylic acid cycle, NAD - malic enzyme type [PATH:spen01100] spen_M00172   C4-dicarboxylic acid cycle, NADP - malic enzyme type [PATH:spen01100] spen_M00176   Assimilatory sulfate reduction, sulfate => H2S [PATH:spen01100] spen_M00307   Pyruvate oxidation, pyruvate => acetyl-CoA [PATH:spen01100] spen_M00366   C10-C20 isoprenoid biosynthesis, plants [PATH:spen01100] spen_M00368   Ethylene biosynthesis, methionine => ethylene [PATH:spen01100] spen_M00371   Castasterone biosynthesis, campesterol => castasterone [PATH:spen01100] spen_M00372   Abscisic acid biosynthesis, beta-carotene => abscisic acid [PATH:spen01100] spen_M00415   Fatty acid elongation in endoplasmic reticulum [PATH:spen01100] spen_M00432   Leucine biosynthesis, 2-oxoisovalerate => 2-oxoisocaproate [PATH:spen01100] spen_M00527   Lysine biosynthesis, DAP aminotransferase pathway, aspartate => lysine [PATH:spen01100] spen_M00531   Assimilatory nitrate reduction, nitrate => ammonia [PATH:spen01100] spen_M00532   Photorespiration [PATH:spen01100] spen_M00549   Nucleotide sugar biosynthesis, glucose => UDP-glucose [PATH:spen01100] spen_M00555   Betaine biosynthesis, choline => betaine [PATH:spen01100] spen_M00570   Isoleucine biosynthesis, threonine => 2-oxobutanoate => isoleucine [PATH:spen01100] spen_M00621   Glycine cleavage system [PATH:spen01100] spen_M00844   Arginine biosynthesis, ornithine => arginine [PATH:spen01100] spen_M00854   Glycogen biosynthesis, glucose-1P => glycogen/starch [PATH:spen01100] spen_M00880   Molybdenum cofactor biosynthesis, GTP => molybdenum cofactor [PATH:spen01100] spen_M00881   Lipoic acid biosynthesis, plants and bacteria, octanoyl-ACP => dihydrolipoyl-E2/H [PATH:spen01100] spen_M00882   Lipoic acid biosynthesis, eukaryotes, octanoyl-ACP => dihydrolipoyl-H [PATH:spen01100] spen_M00892   UDP-N-acetyl-D-glucosamine biosynthesis, eukaryotes, glucose => UDP-GlcNAc [PATH:spen01100] spen_M00897   Thiamine biosynthesis, plants, AIR (+ NAD+) => TMP/thiamine/TPP [PATH:spen01100] spen_M00899   Thiamine salvage pathway, HMP/HET => TMP [PATH:spen01100] spen_M00910   Phenylalanine biosynthesis, chorismate => arogenate => phenylalanine [PATH:spen01100] spen_M00916   Pyridoxal-P biosynthesis, R5P + glyceraldehyde-3P + glutamine => pyridoxal-P [PATH:spen01100] spen_M00917   Phytosterol biosynthesis, squalene 2,3-epoxide => campesterol/sitosterol [PATH:spen01100] spen_M00927   Gibberellin A12 biosynthesis, GAPP => GA12 [PATH:spen01100] spen_M00928   Gibberellin A4/A1 biosynthesis, GA12/GA53 => GA4/GA1 [PATH:spen01100] spen_M00932   Phylloquinone biosynthesis, chorismate (+ phytyl-PP) => phylloquinol [PATH:spen01100] spen_M00933   Plastoquinone biosynthesis, homogentisate + solanesyl-PP => plastoquinol [PATH:spen01100] spen_M00936   Melatonin biosynthesis, plants, tryptophan => serotonin => melatonin [PATH:spen01100] spen_M00938   Pyrimidine deoxyribonucleotide biosynthesis, UDP => dTTP [PATH:spen01100] spen_M00970   Proline degradation, proline => glutamate [PATH:spen01100] spen_M00972   Proline metabolism [PATH:spen01100] Organism Solanum pennellii [GN:spen] Related pathway spen00010   Glycolysis / Gluconeogenesis spen00020   Citrate cycle (TCA cycle) spen00030   Pentose phosphate pathway spen00040   Pentose and glucuronate interconversions spen00051   Fructose and mannose metabolism spen00052   Galactose metabolism spen00053   Ascorbate and aldarate metabolism spen00061   Fatty acid biosynthesis spen00062   Fatty acid elongation spen00071   Fatty acid degradation spen00073   Cutin, suberine and wax biosynthesis spen00100   Steroid biosynthesis spen00130   Ubiquinone and other terpenoid-quinone biosynthesis spen00190   Oxidative phosphorylation spen00195   Photosynthesis spen00196   Photosynthesis - antenna proteins spen00220   Arginine biosynthesis spen00230   Purine metabolism spen00232   Caffeine metabolism spen00240   Pyrimidine metabolism spen00250   Alanine, aspartate and glutamate metabolism spen00260   Glycine, serine and threonine metabolism spen00261   Monobactam biosynthesis spen00270   Cysteine and methionine metabolism spen00280   Valine, leucine and isoleucine degradation spen00290   Valine, leucine and isoleucine biosynthesis spen00300   Lysine biosynthesis spen00310   Lysine degradation spen00330   Arginine and proline metabolism spen00340   Histidine metabolism spen00350   Tyrosine metabolism spen00360   Phenylalanine metabolism spen00380   Tryptophan metabolism spen00400   Phenylalanine, tyrosine and tryptophan biosynthesis spen00410   beta-Alanine metabolism spen00430   Taurine and hypotaurine metabolism spen00440   Phosphonate and phosphinate metabolism spen00450   Selenocompound metabolism spen00460   Cyanoamino acid metabolism spen00470   D-Amino acid metabolism spen00480   Glutathione metabolism spen00500   Starch and sucrose metabolism spen00510   N-Glycan biosynthesis spen00511   Other glycan degradation spen00513   Various types of N-glycan biosynthesis spen00514   Other types of O-glycan biosynthesis spen00520   Amino sugar and nucleotide sugar metabolism spen00531   Glycosaminoglycan degradation spen00543   Exopolysaccharide biosynthesis spen00561   Glycerolipid metabolism spen00562   Inositol phosphate metabolism spen00563   Glycosylphosphatidylinositol (GPI)-anchor biosynthesis spen00564   Glycerophospholipid metabolism spen00565   Ether lipid metabolism spen00590   Arachidonic acid metabolism spen00591   Linoleic acid metabolism spen00592   alpha-Linolenic acid metabolism spen00600   Sphingolipid metabolism spen00601   Glycosphingolipid biosynthesis - lacto and neolacto series spen00603   Glycosphingolipid biosynthesis - globo and isoglobo series spen00604   Glycosphingolipid biosynthesis - ganglio series spen00620   Pyruvate metabolism spen00630   Glyoxylate and dicarboxylate metabolism spen00640   Propanoate metabolism spen00650   Butanoate metabolism spen00660   C5-Branched dibasic acid metabolism spen00670   One carbon pool by folate spen00710   Carbon fixation in photosynthetic organisms spen00730   Thiamine metabolism spen00740   Riboflavin metabolism spen00750   Vitamin B6 metabolism spen00760   Nicotinate and nicotinamide metabolism spen00770   Pantothenate and CoA biosynthesis spen00780   Biotin metabolism spen00785   Lipoic acid metabolism spen00790   Folate biosynthesis spen00860   Porphyrin metabolism spen00900   Terpenoid backbone biosynthesis spen00902   Monoterpenoid biosynthesis spen00904   Diterpenoid biosynthesis spen00905   Brassinosteroid biosynthesis spen00906   Carotenoid biosynthesis spen00908   Zeatin biosynthesis spen00909   Sesquiterpenoid and triterpenoid biosynthesis spen00910   Nitrogen metabolism spen00920   Sulfur metabolism spen00940   Phenylpropanoid biosynthesis spen00941   Flavonoid biosynthesis spen00942   Anthocyanin biosynthesis spen00943   Isoflavonoid biosynthesis spen00944   Flavone and flavonol biosynthesis spen00950   Isoquinoline alkaloid biosynthesis spen00960   Tropane, piperidine and pyridine alkaloid biosynthesis spen00965   Betalain biosynthesis spen00966   Glucosinolate biosynthesis spen00996   Biosynthesis of various alkaloids spen00999   Biosynthesis of various plant secondary metabolites spen01040   Biosynthesis of unsaturated fatty acids KO pathway ko01100     LinkDB All DBs

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