KEGG   PATHWAY: spkc02020
Entry
spkc02020                   Pathway                                
Name
Two-component system - Sphingomonas sp. KC8
Description
Two-component signal transduction systems enable bacteria to sense, respond, and adapt to changes in their environment or in their intracellular state. Each two-component system consists of a sensor protein-histidine kinase (HK) and a response regulator (RR). In the prototypical two-component pathway, the sensor HK phosphorylates its own conserved His residue in response to a signal(s) in the environment. Subsequently, the phosphoryl group of HK is transferred onto a specific Asp residue on the RR. The activated RR can then effect changes in cellular physiology, often by regulating gene expression. Two-component pathways thus often enable cells to sense and respond to stimuli by inducing changes in transcription.
Class
Environmental Information Processing; Signal transduction
Pathway map
spkc02020  Two-component system
spkc02020

Other DBs
GO: 0000160
Organism
Sphingomonas sp. KC8 [GN:spkc]
Gene
KC8_03125  sensor histidine kinase [KO:K07636] [EC:2.7.13.3]
KC8_03155  two component transcriptional regulator [KO:K07657]
KC8_03130  putative phosphate transport system substrate binding protein [KO:K02040]
KC8_00240  phosphate ABC transporter substrate-binding protein [KO:K02040]
KC8_12045  protease Do [KO:K04771] [EC:3.4.21.107]
KC8_06590  copper-binding protein [KO:K07810]
KC8_06600  RND transporter [KO:K07798]
KC8_06595  cation transporter [KO:K07787]
KC8_10535  flagellin [KO:K02406]
KC8_16870  flagellin [KO:K02406]
KC8_16875  flagellin [KO:K02406]
KC8_16880  flagellin [KO:K02406]
KC8_10545  RNA polymerase sigma 28 subunit FliA/WhiG [KO:K02405]
KC8_10575  flagellar motor protein [KO:K02556]
KC8_10635  flagellar motor protein MotA [KO:K02556]
KC8_17010  flagellar motor protein MotA [KO:K02556]
KC8_08735  histidine kinase [KO:K07646] [EC:2.7.13.3]
KC8_08710  Fis family transcriptional regulator [KO:K07667]
KC8_08725  potassium-transporting ATPase subunit A [KO:K01546]
KC8_08720  potassium-transporting ATPase subunit B [KO:K01547] [EC:7.2.2.6]
KC8_08715  ATPase [KO:K01548]
KC8_06905  Heme A synthase [KO:K02259] [EC:1.17.99.9]
KC8_00005  chromosomal replication initiation protein [KO:K02313]
KC8_04980  signal transduction histidine kinase [KO:K14980] [EC:2.7.13.3]
KC8_04975  two component transcriptional regulator [KO:K14981]
KC8_08515  citrate (pro-3S)-lyase [KO:K01644] [EC:4.1.3.34]
KC8_16435  citrate lyase subunit beta [KO:K01644] [EC:4.1.3.34]
KC8_14885  LytTR family two component transcriptional regulator [KO:K08083]
KC8_17180  LuxR family two component transcriptional regulator [KO:K07684]
KC8_18315  serine hydrolase [KO:K01467] [EC:3.5.2.6]
KC8_04450  hypothetical protein [KO:K02651]
KC8_04455  hypothetical protein [KO:K02651]
KC8_11020  Flp pilus assembly protein CpaB [KO:K02279]
KC8_11025  type II and III secretion system protein [KO:K02280]
KC8_11035  Flp pilus assembly protein ATPase CpaE [KO:K02282]
KC8_00910  flagellar protein FlaI [KO:K02283] [EC:7.4.2.8]
KC8_11040  Flp pilus assembly protein TadB [KO:K12510]
KC8_11045  type II secretion system protein [KO:K12511]
KC8_03455  hypothetical protein [KO:K27080]
KC8_16305  PII uridylyl-transferase [KO:K00990] [EC:2.7.7.59]
KC8_07000  nitrogen regulatory protein P-II [KO:K04751]
KC8_02625  nitrogen-specific signal transduction histidine kinase NtrB [KO:K07708] [EC:2.7.13.3]
KC8_02630  Fis family transcriptional regulator [KO:K07712]
KC8_07005  glutamine synthetase [KO:K01915] [EC:6.3.1.2]
KC8_12735  glutamine synthetase [KO:K01915] [EC:6.3.1.2]
KC8_12765  L-glutamine synthetase [KO:K01915] [EC:6.3.1.2]
KC8_02635  signal transduction histidine kinase [KO:K13598] [EC:2.7.13.3]
KC8_02640  Fis family transcriptional regulator [KO:K13599]
KC8_01010  acetyl-CoA acetyltransferase [KO:K00626] [EC:2.3.1.9]
KC8_04605  acetyl-CoA acetyltransferase [KO:K00626] [EC:2.3.1.9]
KC8_18205  acetyl-CoA acyltransferase [KO:K00626] [EC:2.3.1.9]
KC8_06310  putative acyl-CoA thiolase [KO:K00626] [EC:2.3.1.9]
KC8_19610  acetyl-CoA acetyltransferase [KO:K00626] [EC:2.3.1.9]
KC8_00885  acetyl-CoA acetyltransferase [KO:K00626] [EC:2.3.1.9]
KC8_05365  lipid-transfer protein [KO:K00626] [EC:2.3.1.9]
KC8_01045  acetyl-CoA acetyltransferase [KO:K00626] [EC:2.3.1.9]
KC8_08535  C4-dicarboxylate transporter DctA [KO:K11103]
KC8_14205  RNA polymerase factor sigma-54 [KO:K03092]
KC8_04870  chemotaxis protein CheR [KO:K00575] [EC:2.1.1.80]
KC8_17035  chemotaxis protein CheR [KO:K00575] [EC:2.1.1.80]
KC8_01530  chemotaxis protein CheR [KO:K00575] [EC:2.1.1.80]
KC8_14870  hypothetical protein [KO:K03406]
KC8_14905  hypothetical protein [KO:K03406]
KC8_07485  methyl-accepting chemotaxis sensory transducer [KO:K03406]
KC8_16420  methyl-accepting chemotaxis sensory transducer [KO:K03406]
KC8_16810  methyl-accepting chemotaxis protein [KO:K03406]
KC8_16990  methyl-accepting chemotaxis protein [KO:K03406]
KC8_18160  methyl-accepting chemotaxis sensory transducer [KO:K03406]
KC8_04885  methyl-accepting chemotaxis protein [KO:K03406]
KC8_18605  methyl-accepting chemotaxis protein [KO:K03406]
KC8_04850  chemotaxis protein CheW [KO:K03408]
KC8_17030  hypothetical protein [KO:K03408]
KC8_01515  hypothetical protein [KO:K03408]
KC8_16425  hypothetical protein [KO:K03408]
KC8_04875  chemotaxis protein CheA [KO:K03407] [EC:2.7.13.3]
KC8_17025  chemotaxis protein CheA [KO:K03407] [EC:2.7.13.3]
KC8_01510  signal transduction histidine kinase [KO:K03407] [EC:2.7.13.3]
KC8_04855  Fis family transcriptional regulator [KO:K03413]
KC8_17020  transcriptional regulator [KO:K03413]
KC8_17045  chemotaxis protein CheY [KO:K03413]
KC8_01520  transcriptional regulator [KO:K03413]
KC8_04845  transcriptional regulator [KO:K03412] [EC:3.1.1.61 3.5.1.44]
KC8_04865  chemotaxis protein [KO:K03412] [EC:3.1.1.61 3.5.1.44]
KC8_17040  chemotaxis-specific protein-glutamate methyltransferase [KO:K03412] [EC:3.1.1.61 3.5.1.44]
KC8_01525  chemotaxis protein CheB [KO:K03412] [EC:3.1.1.61 3.5.1.44]
KC8_15300  transcriptional regulator [KO:K11443]
KC8_00465  sensor histidine kinase [KO:K13587] [EC:2.7.13.3]
KC8_01505  hypothetical protein [KO:K13588]
KC8_04835  cell cycle transcriptional regulator CtrA [KO:K13584]
KC8_19045  transcriptional regulator [KO:K13589]
KC8_16670  two-component oxygen-sensor histidine kinase FixL [KO:K14986] [EC:2.7.13.3]
KC8_17000  Sensor histidine kinase [KO:K14986] [EC:2.7.13.3]
KC8_13140  two-protein, nitrogen fixation sensor protein fixL [KO:K14986] [EC:2.7.13.3]
KC8_16995  transcriptional regulator [KO:K14987]
KC8_16665  transcriptional regulator [KO:K14987]
KC8_13145  transcriptional regulator [KO:K14987]
KC8_10530  Fis family transcriptional regulator [KO:K10943]
KC8_11465  Crp/Fnr family transcriptional regulator [KO:K10914]
KC8_09885  Crp/Fnr family transcriptional regulator [KO:K10914]
KC8_15600  hypothetical protein [KO:K01425] [EC:3.5.1.2]
KC8_09555  histidine kinase [KO:K15011] [EC:2.7.13.3]
KC8_09560  hypothetical protein [KO:K15012]
KC8_07770  ubiquinol-cytochrome c reductase iron-sulfur subunit [KO:K00411] [EC:7.1.1.8]
KC8_07765  cytochrome b/b6 domain-containing protein [KO:K00412]
KC8_07760  cytochrome c1 [KO:K00413]
KC8_12540  cytochrome C [KO:K08738]
KC8_00260  class I cytochrome c [KO:K08738]
KC8_16685  cytochrome c oxidase subunit CcoN [KO:K00404] [EC:7.1.1.9]
KC8_19335  Cytochrome c oxidase subunit CcoN [KO:K00404] [EC:7.1.1.9]
KC8_16690  peptidase S41 [KO:K00405]
KC8_19330  peptidase S41 [KO:K00405]
KC8_16695  cytochrome oxidase [KO:K00407]
KC8_19325  Cytochrome c oxidase subunit CcoQ [KO:K00407]
KC8_16700  cytochrome Cbb3 [KO:K00406]
KC8_19320  cytochrome C [KO:K00406]
KC8_00810  cytochrome bd-I oxidase subunit I [KO:K00425] [EC:7.1.1.7]
KC8_00815  ubiquinol oxidase subunit II [KO:K00426] [EC:7.1.1.7]
KC8_12120  hypothetical protein [KO:K12340]
KC8_03845  membrane protein [KO:K12340]
KC8_18060  TolC family type I secretion outer membrane protein [KO:K12340]
KC8_18485  transporter [KO:K12340]
KC8_14000  capsule biosynthesis protein [KO:K01991]
KC8_08030  polysaccharide export protein [KO:K01991]
KC8_08455  polysaccharide export protein [KO:K01991]
KC8_02480  polysaccharide export periplasmic protein [KO:K01991]
KC8_18800  protein-tyrosine phosphatase [KO:K25307] [EC:3.1.3.48]
KC8_05645  UDP-N-acetylglucosamine 2-epimerase [KO:K01791] [EC:5.1.3.14]
KC8_02950  hypothetical protein [KO:K07165]
KC8_02975  FecR iron sensor protein [KO:K07165]
KC8_18505  anti-FecI sigma factor FecR [KO:K07165]
KC8_12520  anti-FecI sigma factor FecR [KO:K07165]
KC8_15655  transcriptional regulator, putative [KO:K07165]
KC8_06680  hypothetical protein [KO:K07165]
KC8_05770  hypothetical protein [KO:K07165]
KC8_11635  hypothetical protein [KO:K20976]
KC8_10560  negative regulator of flagellin synthesis [KO:K02398]
Compound
C00007  Oxygen
C00009  Orthophosphate
C00025  L-Glutamate
C00031  D-Glucose
C00034  Manganese
C00036  Oxaloacetate
C00038  Zinc cation
C00042  Succinate
C00049  L-Aspartate
C00064  L-Glutamine
C00070  Copper
C00088  Nitrite
C00092  D-Glucose 6-phosphate
C00122  Fumarate
C00149  (S)-Malate
C00158  Citrate
C00164  Acetoacetate
C00237  CO
C00238  Potassium cation
C00244  Nitrate
C00282  Hydrogen
C00291  Nickel
C00305  Magnesium cation
C00399  Ubiquinone
C00533  Nitric oxide
C00547  L-Noradrenaline
C00697  Nitrogen
C00788  L-Adrenaline
C00828  Menaquinone
C01019  L-Fucose
C01104  Trimethylamine N-oxide
C01667  Bacitracin
C02084  Tetrathionate
C05757  (3R)-3-Hydroxydodecanoyl-[acyl-carrier protein]
C05818  2-Demethylmenaquinone
C06230  Fe-enterobactin
C06689  Vancomycin
C06696  Lead
C11612  Polymyxin B
C11842  N-(3-(S)-Hydroxybutyryl)homoserine lactone
C11849  3-Hydroxy-palmitic acid methyl ester
C12008  Ramoplanin A2
C13768  Colistin sulfate
C14819  Fe3+
C16421  AI-2
C16463  3',5'-Cyclic diGMP
C16640  CAI-1
C16665  12-Methyltetradecanoic acid
C18206  cis-11-Methyl-2-dodecenoic acid
C21220  AIP-1
C21221  CSP
C21241  AIP-2
C21242  AIP-3
C21243  AIP-4
C21245  AgrD1 peptide
D07746  Colistin (INN)
D08401  Polymyxin B (INN)
Reference
  Authors
Yamamoto K, Hirao K, Oshima T, Aiba H, Utsumi R, Ishihama A.
  Title
Functional characterization in vitro of all two-component signal transduction systems from Escherichia coli.
  Journal
J Biol Chem 280:1448-56 (2005)
DOI:10.1074/jbc.M410104200
Reference
  Authors
Abdel-Fattah WR, Chen Y, Eldakak A, Hulett FM.
  Title
Bacillus subtilis phosphorylated PhoP: direct activation of the E(sigma)A- and repression of the E(sigma)E-responsive phoB-PS+V promoters during pho response.
  Journal
J Bacteriol 187:5166-78 (2005)
DOI:10.1128/JB.187.15.5166-5178.2005
Reference
  Authors
Navarre WW, Halsey TA, Walthers D, Frye J, McClelland M, Potter JL, Kenney LJ, Gunn JS, Fang FC, Libby SJ.
  Title
Co-regulation of Salmonella enterica genes required for virulence and resistance to antimicrobial peptides by SlyA and PhoP/PhoQ.
  Journal
Mol Microbiol 56:492-508 (2005)
DOI:10.1111/j.1365-2958.2005.04553.x
Reference
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Cai SJ, Inouye M.
  Title
EnvZ-OmpR interaction and osmoregulation in Escherichia coli.
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J Biol Chem 277:24155-61 (2002)
DOI:10.1074/jbc.M110715200
Reference
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  Title
The Escherichia coli CpxA-CpxR envelope stress response system regulates expression of the porins ompF and ompC.
  Journal
J Bacteriol 187:5723-31 (2005)
DOI:10.1128/JB.187.16.5723-5731.2005
Reference
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Nagakubo S, Nishino K, Hirata T, Yamaguchi A.
  Title
The putative response regulator BaeR stimulates multidrug resistance of Escherichia coli via a novel multidrug exporter system, MdtABC.
  Journal
J Bacteriol 184:4161-7 (2002)
DOI:10.1128/JB.184.15.4161-4167.2002
Reference
  Authors
Hagiwara D, Yamashino T, Mizuno T.
  Title
A Genome-wide view of the Escherichia coli BasS-BasR two-component system implicated in iron-responses.
  Journal
Biosci Biotechnol Biochem 68:1758-67 (2004)
DOI:10.1271/bbb.68.1758
Reference
  Authors
Munson GP, Lam DL, Outten FW, O'Halloran TV.
  Title
Identification of a copper-responsive two-component system on the chromosome of Escherichia coli K-12.
  Journal
J Bacteriol 182:5864-71 (2000)
DOI:10.1128/JB.182.20.5864-5871.2000
Reference
  Authors
Sperandio V, Torres AG, Kaper JB.
  Title
Quorum sensing Escherichia coli regulators B and C (QseBC): a novel two-component regulatory system involved in the regulation of flagella and motility by quorum sensing in E. coli.
  Journal
Mol Microbiol 43:809-21 (2002)
DOI:10.1046/j.1365-2958.2002.02803.x
Reference
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  Title
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Prog Nucleic Acid Res Mol Biol 75:293-320 (2003)
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Reference
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The TorR high-affinity binding site plays a key role in both torR autoregulation and torCAD operon expression in Escherichia coli.
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J Bacteriol 182:961-6 (2000)
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Reference
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  Title
Identification of a quinone-sensitive redox switch in the ArcB sensor kinase.
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Proc Natl Acad Sci U S A 101:13318-23 (2004)
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Reference
PMID:2666399
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Genetic regulation of the tricarboxylate transport operon (tctI) of Salmonella typhimurium.
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Reference
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  Title
A novel two-component regulatory system in Bacillus subtilis for the survival of severe secretion stress.
  Journal
Mol Microbiol 41:1159-72 (2001)
DOI:10.1046/j.1365-2958.2001.02576.x
Reference
  Authors
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  Title
ResD signal transduction regulator of aerobic respiration in Bacillus subtilis: ctaA promoter regulation.
  Journal
Mol Microbiol 37:1208-19 (2000)
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Reference
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A VicRK signal transduction system in Streptococcus mutans affects gtfBCD, gbpB, and ftf expression, biofilm formation, and genetic competence development.
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J Bacteriol 187:4064-76 (2005)
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Reference
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  Title
Identification and characterization of a regulatory sequence recognized by Mycobacterium tuberculosis persistence regulator MprA.
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J Bacteriol 187:202-12 (2005)
DOI:10.1128/JB.187.1.202-212.2005
Reference
  Authors
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  Title
Unusual two-component signal transduction pathways in the actinobacteria.
  Journal
Adv Appl Microbiol 61:1-26 (2007)
DOI:10.1016/S0065-2164(06)61001-0
Reference
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  Title
Osmosensing and osmosignaling in Corynebacterium glutamicum.
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Amino Acids 37:487-97 (2009)
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Reference
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  Title
Oxygen-insensitive synthesis of the photosynthetic membranes of Rhodobacter sphaeroides: a mutant histidine kinase.
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Reference
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In vitro evidence of two-component system phosphorylation between the Mycobacterium tuberculosis TrcR/TrcS proteins.
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Reference
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Reference
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  Title
The sensor kinase CitA (DpiB) of Escherichia coli functions as a high-affinity citrate receptor.
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Arch Microbiol 177:313-21 (2002)
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Reference
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Function of DcuS from Escherichia coli as a fumarate-stimulated histidine protein kinase in vitro.
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J Biol Chem 277:39809-14 (2002)
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Reference
PMID:8550490
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Identification and molecular characterization of a putative regulatory locus that affects autolysis in Staphylococcus aureus.
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Reference
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Analysis of genetic elements controlling Staphylococcus aureus lrgAB expression: potential role of DNA topology in SarA regulation.
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Reference
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High genetic variability of the agr locus in Staphylococcus species.
  Journal
J Bacteriol 184:1180-6 (2002)
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Reference
PMID:8501030
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  Title
Dual response regulators (NarL and NarP) interact with dual sensors (NarX and NarQ) to control nitrate- and nitrite-regulated gene expression in Escherichia coli K-12.
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J Bacteriol 175:3259-68 (1993)
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Reference
PMID:9220011
  Authors
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  Title
'Locked-on' and 'locked-off' signal transduction mutations in the periplasmic domain of the Escherichia coli NarQ and NarX sensors affect nitrate- and nitrite-dependent regulation by NarL and NarP.
  Journal
Mol Microbiol 24:1049-60 (1997)
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Reference
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  Title
Cooperativity in signal transfer through the Uhp system of Escherichia coli.
  Journal
J Bacteriol 184:4205-10 (2002)
DOI:10.1128/JB.184.15.4205-4210.2002
Reference
  Authors
Hagiwara D, Sugiura M, Oshima T, Mori H, Aiba H, Yamashino T, Mizuno T.
  Title
Genome-wide analyses revealing a signaling network of the RcsC-YojN-RcsB phosphorelay system in Escherichia coli.
  Journal
J Bacteriol 185:5735-46 (2003)
DOI:10.1128/JB.185.19.5735-5746.2003
Reference
  Authors
Hirakawa H, Nishino K, Yamada J, Hirata T, Yamaguchi A.
  Title
Beta-lactam resistance modulated by the overexpression of response regulators of two-component signal transduction systems in Escherichia coli.
  Journal
J Antimicrob Chemother 52:576-82 (2003)
DOI:10.1093/jac/dkg406
Reference
  Authors
Suzuki K, Wang X, Weilbacher T, Pernestig AK, Melefors O, Georgellis D, Babitzke P, Romeo T.
  Title
Regulatory circuitry of the CsrA/CsrB and BarA/UvrY systems of Escherichia coli.
  Journal
J Bacteriol 184:5130-40 (2002)
DOI:10.1128/JB.184.18.5130-5140.2002
Reference
  Authors
Kato A, Ohnishi H, Yamamoto K, Furuta E, Tanabe H, Utsumi R.
  Title
Transcription of emrKY is regulated by the EvgA-EvgS two-component system in Escherichia coli K-12.
  Journal
Biosci Biotechnol Biochem 64:1203-9 (2000)
DOI:10.1271/bbb.64.1203
Reference
  Authors
Ansaldi M, Dubnau D.
  Title
Diversifying selection at the Bacillus quorum-sensing locus and determinants of modification specificity during synthesis of the ComX pheromone.
  Journal
J Bacteriol 186:15-21 (2004)
DOI:10.1128/JB.186.1.15-21.2004
Reference
  Authors
Gabdrakhmanova L, Vishniakov I, Sharipova M, Balaban N, Kostrov S, Leshchinskaya I.
  Title
Salt stress induction of glutamyl endopeptidase biosynthesis in Bacillus intermedius.
  Journal
Microbiol Res 160:233-42 (2005)
DOI:10.1016/j.micres.2004.05.005
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Related
pathway
spkc00190  Oxidative phosphorylation
spkc00550  Peptidoglycan biosynthesis
spkc00910  Nitrogen metabolism
spkc02030  Bacterial chemotaxis
spkc02040  Flagellar assembly
spkc03070  Bacterial secretion system
KO pathway
ko02020   
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