KEGG   PATHWAY: srx03082
Entry
srx03082                    Pathway                                
Name
ATP-dependent chromatin remodeling - Sinocyclocheilus rhinocerous
Class
Genetic Information Processing; Chromosome
Pathway map
srx03082  ATP-dependent chromatin remodeling
srx03082

Organism
Sinocyclocheilus rhinocerous [GN:srx]
Gene
107757072  SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 5 [KO:K11654] [EC:5.6.2.-]
107746120  probable global transcription activator SNF2L1 [KO:K11654] [EC:5.6.2.-]
107729254  bromodomain adjacent to zinc finger domain protein 1A-like isoform X1 [KO:K11655]
107733880  bromodomain adjacent to zinc finger domain protein 1A-like isoform X1 [KO:K11655]
107714438  tyrosine-protein kinase BAZ1B-like [KO:K11658]
107709818  tyrosine-protein kinase BAZ1B-like [KO:K11658]
107750888  baz2a; bromodomain adjacent to zinc finger domain protein 2A [KO:K15224]
107705669  bromodomain adjacent to zinc finger domain protein 2A-like [KO:K15224]
107742327  bromodomain adjacent to zinc finger domain protein 2B-like isoform X1 [KO:K26167]
107730561  bromodomain adjacent to zinc finger domain protein 2B-like [KO:K26167]
107722693  bromodomain adjacent to zinc finger domain protein 2B-like [KO:K26167]
107722130  chromatin accessibility complex protein 1-like [KO:K11656]
107731596  chromatin accessibility complex protein 1-like [KO:K11656]
107723347  pole3; DNA polymerase epsilon subunit 3 [KO:K02326] [EC:2.7.7.7]
107740970  DNA polymerase epsilon subunit 3-like [KO:K02326] [EC:2.7.7.7]
107715826  remodeling and spacing factor 1-like [KO:K11657]
107743455  remodeling and spacing factor 1-like [KO:K11657]
107735935  remodeling and spacing factor 1-like [KO:K11657]
107741163  remodeling and spacing factor 1-like [KO:K11657]
107746246  SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 5-like [KO:K11727] [EC:5.6.2.-]
107741199  SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 5-like [KO:K11727] [EC:5.6.2.-]
107723593  LOW QUALITY PROTEIN: nucleosome-remodeling factor subunit BPTF-like [KO:K11728]
107748807  nucleosome-remodeling factor subunit BPTF-like [KO:K11728]
107709266  histone-binding protein RBBP4-like [KO:K10752]
107724352  histone-binding protein RBBP4 [KO:K10752]
107730765  histone-binding protein RBBP7 isoform X1 [KO:K10752]
107753839  histone-binding protein RBBP7-like isoform X1 [KO:K10752]
107720679  chromatin complexes subunit BAP18-like [KO:K23406]
107742347  chromatin complexes subunit BAP18-like [KO:K23406]
107749790  chromatin complexes subunit BAP18-like isoform X1 [KO:K23406]
107750573  chromatin complexes subunit BAP18-like isoform X1 [KO:K23406]
107707476  cat eye syndrome critical region protein 2-like isoform X1 [KO:K25830]
107732806  cat eye syndrome critical region protein 2-like isoform X1 [KO:K25830]
107707064  chromodomain-helicase-DNA-binding protein 3-like [KO:K11642] [EC:5.6.2.-]
107738011  chromodomain-helicase-DNA-binding protein 3-like isoform X1 [KO:K11642] [EC:5.6.2.-]
107724784  chromodomain-helicase-DNA-binding protein 4-like isoform X1 [KO:K11643] [EC:5.6.2.-]
107727705  chromodomain-helicase-DNA-binding protein 4-like [KO:K11643] [EC:5.6.2.-]
107714608  chromodomain-helicase-DNA-binding protein 4-like isoform X1 [KO:K11643] [EC:5.6.2.-]
107748913  chromodomain-helicase-DNA-binding protein 4-like [KO:K11643] [EC:5.6.2.-]
107709289  probable histone deacetylase 1-B isoform X1 [KO:K06067] [EC:3.5.1.98]
107745719  probable histone deacetylase 1-B isoform X1 [KO:K06067] [EC:3.5.1.98]
107717343  methyl-CpG-binding domain protein 2-like isoform X1 [KO:K11590]
107731306  methyl-CpG-binding domain protein 2-like [KO:K11590]
107719585  methyl-CpG-binding domain protein 3-like isoform X1 [KO:K11591]
107724987  methyl-CpG-binding domain protein 3-like isoform X1 [KO:K11591]
107729711  methyl-CpG-binding domain protein 3-like isoform X1 [KO:K11591]
107713415  methyl-CpG-binding domain protein 3-like isoform X1 [KO:K11591]
107731904  metastasis-associated protein MTA2-like [KO:K11660]
107709145  metastasis-associated protein MTA2-like [KO:K11660]
107728718  metastasis-associated protein MTA3-like [KO:K11660]
107741866  metastasis-associated protein MTA1-like [KO:K11660]
107749351  metastasis-associated protein MTA3-like isoform X1 [KO:K11660]
107752729  mta1; metastasis-associated protein MTA1 isoform X1 [KO:K11660]
107706168  transcriptional repressor p66-beta-like [KO:K23194]
107728574  transcriptional repressor p66-alpha-like isoform X1 [KO:K23194]
107719613  transcriptional repressor p66-alpha-like [KO:K23194]
107712390  transcriptional repressor p66-alpha-like [KO:K23194]
107729618  transcriptional repressor p66-alpha-like isoform X1 [KO:K23194]
107751967  PHD finger protein 6-like isoform X1 [KO:K23310]
107732717  PHD finger protein 6-like [KO:K23310]
107720137  uncharacterized protein LOC107720137 [KO:K23310]
107722329  cyclin-dependent kinase 2-associated protein 1-like [KO:K26454]
107706758  cyclin-dependent kinase 2-associated protein 1-like [KO:K26454]
107748829  cyclin-dependent kinase 2-associated protein 2-like [KO:K26455]
107737098  cyclin-dependent kinase 2-associated protein 2-like [KO:K26455]
107727446  probable global transcription activator SNF2L2 isoform X1 [KO:K11647] [EC:5.6.2.-]
107728499  smarca4; transcription activator BRG1 isoform X1 [KO:K11647] [EC:5.6.2.-]
107755735  probable global transcription activator SNF2L2 isoform X1 [KO:K11647] [EC:5.6.2.-]
107758124  transcription activator BRG1 isoform X1 [KO:K11647] [EC:5.6.2.-]
107705879  transcription activator BRG1-like [KO:K11647] [EC:5.6.2.-]
107711880  smarcb1; SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily B member 1 isoform X1 [KO:K11648]
107737875  SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily B member 1-A-like isoform X1 [KO:K11648]
107724910  SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily B member 1-A isoform X1 [KO:K11648]
107736887  SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily B member 1-A-like isoform X1 [KO:K11648]
107710344  SWI/SNF complex subunit SMARCC1-like [KO:K11649]
107719149  SWI/SNF complex subunit SMARCC1-like [KO:K11649]
107711050  SWI/SNF complex subunit SMARCC2-like [KO:K11649]
107737815  smarcc1; SWI/SNF complex subunit SMARCC1 [KO:K11649]
107748388  SWI/SNF complex subunit SMARCC2-like [KO:K11649]
107748646  SWI/SNF complex subunit SMARCC1-like [KO:K11649]
107734085  SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 2-like [KO:K11650]
107745673  SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 2-like [KO:K11650]
107718026  SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 3-like isoform X1 [KO:K11650]
107709803  SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 3-like [KO:K11650]
107742121  SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 3 isoform X1 [KO:K11650]
107753305  SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 2-like isoform X1 [KO:K11650]
107724410  SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 3-like [KO:K11650]
107736343  SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 1 [KO:K11650]
107752998  SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily E member 1-like isoform X1 [KO:K11651]
107709999  SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily E member 1-like [KO:K11651]
107725373  actin, cytoplasmic 1 [KO:K05692]
107725374  actin, cytoplasmic 1 [KO:K05692]
107722944  actin, cytoplasmic 1 [KO:K05692]
107709208  actin-like protein 6A [KO:K11340]
107732023  actin-like protein 6A [KO:K11340]
107757172  actin-like protein 6B isoform X1 [KO:K11652]
107722340  B-cell CLL/lymphoma 7 protein family member A-like isoform X1 [KO:K25605]
107706784  B-cell CLL/lymphoma 7 protein family member A-like isoform X1 [KO:K25605]
107708648  B-cell CLL/lymphoma 7 protein family member A-like [KO:K25605]
107728825  B-cell CLL/lymphoma 7 protein family member B-A [KO:K25605]
107709815  B-cell CLL/lymphoma 7 protein family member B-B [KO:K25605]
107711066  B-cell CLL/lymphoma 7 protein family member B-B-like [KO:K25605]
107734433  B-cell CLL/lymphoma 7 protein family member B-A-like [KO:K25605]
107746817  B-cell CLL/lymphoma 7 protein family member A isoform X1 [KO:K25605]
107708596  ss18; protein SSXT isoform X1 [KO:K15623]
107705135  protein SSXT-like [KO:K15623]
107706810  ss18l1; calcium-responsive transactivator [KO:K15623]
107712599  AT-rich interactive domain-containing protein 1A-like isoform X1 [KO:K11653]
107733715  AT-rich interactive domain-containing protein 1A-like isoform X1 [KO:K11653]
107742311  AT-rich interactive domain-containing protein 1B-like [KO:K11653]
107737764  AT-rich interactive domain-containing protein 1A-like isoform X1 [KO:K11653]
107755275  AT-rich interactive domain-containing protein 1A-like isoform X1 [KO:K11653]
107747943  arid1b; AT-rich interactive domain-containing protein 1B isoform X1 [KO:K11653]
107749650  LOW QUALITY PROTEIN: zinc finger protein neuro-d4-like [KO:K22198]
107721322  zinc finger protein DPF3 isoform X1 [KO:K22198]
107756702  zinc finger protein ubi-d4-like isoform X1 [KO:K22198]
107756570  zinc finger protein DPF3-like [KO:K22198]
107758770  zinc finger protein neuro-d4-like [KO:K22198]
107734150  zinc finger protein ubi-d4-like isoform X1 [KO:K13196]
107746382  zinc finger protein ubi-d4-like isoform X1 [KO:K13196]
107741074  zinc finger protein ubi-d4-like [KO:K13196]
107707985  AT-rich interactive domain-containing protein 2-like isoform X1 [KO:K11765]
107707104  AT-rich interactive domain-containing protein 2-like isoform X1 [KO:K11765]
107714479  protein polybromo-1-like [KO:K11757]
107713535  protein polybromo-1-like isoform X1 [KO:K11757]
107708178  protein polybromo-1-like isoform X1 [KO:K11757]
107744848  protein polybromo-1-like [KO:K11757]
107750232  brd7; bromodomain-containing protein 7 isoform X1 [KO:K11723]
107742768  bromodomain-containing protein 7-like isoform X1 [KO:K11723]
107754742  PHD finger protein 10-like [KO:K22197]
107717837  phf10; PHD finger protein 10 [KO:K22197]
107754443  bromodomain-containing protein 9 isoform X1 [KO:K22184]
107729802  bromodomain-containing protein 9-like [KO:K22184]
107714538  glioma tumor suppressor candidate region gene 1 protein-like isoform X1 [KO:K25612]
107758076  glioma tumor suppressor candidate region gene 1 protein-like [KO:K25612]
107749855  GLTSCR1-like protein isoform X1 [KO:K25613]
107721325  DNA helicase INO80-like isoform X1 [KO:K11665] [EC:5.6.2.-]
107739367  DNA helicase INO80-like isoform X1 [KO:K11665] [EC:5.6.2.-]
107745145  INO80 complex subunit B-like [KO:K11666]
107748026  INO80 complex subunit B-like [KO:K11666]
107723410  INO80 complex subunit C-like [KO:K11667]
107706244  INO80 complex subunit C-like [KO:K11667]
107752578  INO80 complex subunit D-like [KO:K11668]
107747229  INO80 complex subunit D-like isoform X1 [KO:K11668]
107748552  INO80 complex subunit D-B-like [KO:K11668]
107705605  INO80 complex subunit D-B-like [KO:K11668]
107717446  INO80 complex subunit E-like isoform X1 [KO:K11669]
107723407  INO80 complex subunit E-like isoform X1 [KO:K11669]
107726230  TCF3 fusion partner-like [KO:K11670]
107713915  TCF3 fusion partner-like [KO:K11670]
107715331  nuclear factor related to kappa-B-binding protein-like isoform X1 [KO:K11671]
107756114  nuclear factor related to kappa-B-binding protein-like isoform X1 [KO:K11671]
107730878  microspherule protein 1-like [KO:K11674]
107737356  mcrs1; microspherule protein 1 [KO:K11674]
107715723  uchl5; ubiquitin carboxyl-terminal hydrolase isozyme L5 [KO:K05610] [EC:3.4.19.12]
107736548  ubiquitin carboxyl-terminal hydrolase isozyme L5-like [KO:K05610] [EC:3.4.19.12]
107721190  ruvB-like 1 [KO:K04499] [EC:5.6.2.4]
107712098  ruvB-like 1 [KO:K04499] [EC:5.6.2.4]
107712365  ruvB-like 2 [KO:K11338] [EC:5.6.2.3]
107722783  ruvB-like 2 [KO:K11338] [EC:5.6.2.3]
107716267  actr5; actin-related protein 5 [KO:K11672]
107730643  actin-related protein 8-like [KO:K11673]
107750819  actin-related protein 8 [KO:K11673]
107756049  transcriptional repressor protein YY1-like isoform X1 [KO:K09201]
107719470  transcriptional repressor protein YY1-like [KO:K09201]
107712210  transcriptional repressor protein YY1-like isoform X1 [KO:K09201]
107733162  transcriptional repressor protein YY1-like [KO:K09201]
107706895  LOW QUALITY PROTEIN: helicase SRCAP-like [KO:K11661] [EC:5.6.2.-]
107727294  helicase SRCAP-like [KO:K11661] [EC:5.6.2.-]
107750524  DNA methyltransferase 1-associated protein 1-like [KO:K11324]
107758267  DNA methyltransferase 1-associated protein 1-like [KO:K11324]
107729140  YEATS domain-containing protein 4 [KO:K11341]
107741777  vps72; vacuolar protein sorting-associated protein 72 homolog [KO:K11664]
107755321  histone H2A-like [KO:K11251]
107708416  core histone macro-H2A.2-like [KO:K11251]
107723972  histone H2A-like isoform X1 [KO:K11251]
107708202  histone H2A.Z [KO:K11251]
107723098  histone H2A-like [KO:K11251]
107723099  histone H2A-like [KO:K11251]
107755850  histone H2A.V isoform X1 [KO:K11251]
107708256  histone H2A.V-like [KO:K11251]
107717877  histone H2AX-like [KO:K11251]
107739159  histone H2A, sperm-like isoform X1 [KO:K11251]
107739162  histone H2A, sperm-like [KO:K11251]
107742618  histone H2A-like [KO:K11251]
107749753  histone H2A-like [KO:K11251]
107747771  histone H2A-like [KO:K11251]
107747776  histone H2A-like [KO:K11251]
107747777  histone H2A-like [KO:K11251]
107747778  histone H2A-like [KO:K11251]
107747779  histone H2A-like [KO:K11251]
107747006  histone H2A-like [KO:K11251]
107745398  histone H2A-like [KO:K11251]
107745849  histone H2A, sperm-like [KO:K11251]
107751401  histone H2A [KO:K11251]
107745489  histone H2A-like [KO:K11251]
107745490  histone H2A-like [KO:K11251]
107745491  histone H2A-like isoform X1 [KO:K11251]
107745495  histone H2A-like [KO:K11251]
107743947  histone H2A.V-like [KO:K11251]
107757875  core histone macro-H2A.1 [KO:K11251]
107756936  histone H2A-like [KO:K11251]
107756939  histone H2A-like [KO:K11251]
107722789  histone H2AX [KO:K11251]
107728419  histone H2A-like isoform X1 [KO:K11251]
107727383  core histone macro-H2A.2-like [KO:K11251]
107751098  histone H2A, sperm-like [KO:K11251]
107706756  histone H2A.Z-like [KO:K11251]
107716686  actin-related protein 6-like [KO:K11662]
107753692  actin-related protein 6 [KO:K11662]
107752359  zinc finger HIT domain-containing protein 1-like [KO:K11663]
107746412  zinc finger HIT domain-containing protein 1-like [KO:K11663]
107726207  E1A-binding protein p400-like isoform X1 [KO:K11320] [EC:5.6.2.-]
107753127  E1A-binding protein p400-like [KO:K11320] [EC:5.6.2.-]
107724687  trrap; transformation/transcription domain-associated protein [KO:K08874]
107734152  transformation/transcription domain-associated protein [KO:K08874]
107738770  mortality factor 4-like protein 1 [KO:K11339]
107705719  MRG/MORF4L-binding protein-like [KO:K11343]
107724191  MRG/MORF4L-binding protein-like isoform X1 [KO:K11343]
107731710  bromodomain-containing protein 8-like [KO:K11321]
107758534  bromodomain-containing protein 8-like isoform X1 [KO:K11321]
107715413  bromodomain-containing protein 8-like [KO:K11321]
107733476  bromodomain-containing protein 8-like [KO:K11321]
107745003  inhibitor of growth protein 3-like isoform X1 [KO:K11319]
107724031  enhancer of polycomb homolog 2-like [KO:K11322]
107709422  enhancer of polycomb homolog 2-like [KO:K11322]
107706605  enhancer of polycomb homolog 1-like isoform X1 [KO:K11322]
107753261  enhancer of polycomb homolog 1-like isoform X1 [KO:K11322]
107721699  enhancer of polycomb homolog 1-like [KO:K11322]
107734046  chromatin modification-related protein MEAF6-like isoform X1 [KO:K11344]
107727276  chromatin modification-related protein MEAF6 isoform X1 [KO:K11344]
107755660  histone acetyltransferase KAT5-like isoform X1 [KO:K11304] [EC:2.3.1.48]
107747823  histone acetyltransferase KAT5-like [KO:K11304] [EC:2.3.1.48]
107732605  histone acetyltransferase KAT5-like isoform X1 [KO:K11304] [EC:2.3.1.48]
Reference
PMID:31769422
  Authors
Hasan N, Ahuja N
  Title
The Emerging Roles of ATP-Dependent Chromatin Remodeling Complexes in Pancreatic Cancer.
  Journal
Cancers (Basel) 11:cancers11121859 (2019)
DOI:10.3390/cancers11121859
Reference
PMID:32001526
  Authors
He S, Wu Z, Tian Y, Yu Z, Yu J, Wang X, Li J, Liu B, Xu Y
  Title
Structure of nucleosome-bound human BAF complex.
  Journal
Science 367:875-881 (2020)
DOI:10.1126/science.aaz9761
Reference
PMID:33941852
  Authors
Wanior M, Kramer A, Knapp S, Joerger AC
  Title
Exploiting vulnerabilities of SWI/SNF chromatin remodelling complexes for cancer therapy.
  Journal
Oncogene 40:3637-3654 (2021)
DOI:10.1038/s41388-021-01781-x
Reference
PMID:20493981
  Authors
Burgio G, Onorati MC, Corona DF
  Title
Chromatin remodeling regulation by small molecules and metabolites.
  Journal
Biochim Biophys Acta 1799:671-80 (2010)
DOI:10.1016/j.bbagrm.2010.05.007
KO pathway
ko03082   
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