KEGG   PATHWAY: ssum00230
Entry
ssum00230                   Pathway                                
Name
Purine metabolism - Shinella sumterensis
Class
Metabolism; Nucleotide metabolism
Pathway map
ssum00230  Purine metabolism
ssum00230

Module
ssum_M00005  PRPP biosynthesis, ribose 5P => PRPP [PATH:ssum00230]
ssum_M00048  De novo purine biosynthesis, PRPP + glutamine => IMP [PATH:ssum00230]
ssum_M00049  Adenine ribonucleotide biosynthesis, IMP => ADP,ATP [PATH:ssum00230]
ssum_M00050  Guanine ribonucleotide biosynthesis, IMP => GDP,GTP [PATH:ssum00230]
ssum_M00053  Deoxyribonucleotide biosynthesis, ADP/GDP/CDP/UDP => dATP/dGTP/dCTP/dUTP [PATH:ssum00230]
ssum_M00958  Adenine ribonucleotide degradation, AMP => Urate [PATH:ssum00230]
ssum_M00959  Guanine ribonucleotide degradation, GMP => Urate [PATH:ssum00230]
Other DBs
GO: 0006163 0042278
Organism
Shinella sumterensis [GN:ssum]
Gene
Q9314_09990  phosphopentomutase [KO:K01839] [EC:5.4.2.7]
Q9314_14575  alpha-D-glucose phosphate-specific phosphoglucomutase [KO:K01835] [EC:5.4.2.2]
Q9314_16510  ribose-phosphate pyrophosphokinase [KO:K00948] [EC:2.7.6.1]
Q9314_04520  purF; amidophosphoribosyltransferase [KO:K00764] [EC:2.4.2.14]
Q9314_14215  purD; phosphoribosylamine--glycine ligase [KO:K01945] [EC:6.3.4.13]
Q9314_05920  purN; phosphoribosylglycinamide formyltransferase [KO:K11175] [EC:2.1.2.2]
Q9314_00075  purL; phosphoribosylformylglycinamidine synthase subunit PurL [KO:K23269] [EC:6.3.5.3]
Q9314_00105  purS; phosphoribosylformylglycinamidine synthase subunit PurS [KO:K23264] [EC:6.3.5.3]
Q9314_00095  purQ; phosphoribosylformylglycinamidine synthase subunit PurQ [KO:K23265] [EC:6.3.5.3 3.5.1.2]
Q9314_05915  purM; phosphoribosylformylglycinamidine cyclo-ligase [KO:K01933] [EC:6.3.3.1]
Q9314_14830  5-(carboxyamino)imidazole ribonucleotide synthase [KO:K01589] [EC:6.3.4.18]
Q9314_14835  purE; 5-(carboxyamino)imidazole ribonucleotide mutase [KO:K01588] [EC:5.4.99.18]
Q9314_00110  phosphoribosylaminoimidazolesuccinocarboxamide synthase [KO:K01923] [EC:6.3.2.6]
Q9314_01035  phosphoribosylaminoimidazolesuccinocarboxamide synthase [KO:K01923] [EC:6.3.2.6]
Q9314_00130  purB; adenylosuccinate lyase [KO:K01756] [EC:4.3.2.2]
Q9314_10700  purH; bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase [KO:K00602] [EC:2.1.2.3 3.5.4.10]
Q9314_16430  adenine phosphoribosyltransferase [KO:K00759] [EC:2.4.2.7]
Q9314_14750  5'-nucleotidase C-terminal domain-containing protein [KO:K11751] [EC:3.1.3.5 3.6.1.45]
Q9314_02100  surE; 5'/3'-nucleotidase SurE [KO:K03787] [EC:3.1.3.5 3.1.3.6]
Q9314_09965  purine-nucleoside phosphorylase [KO:K03783] [EC:2.4.2.1]
Q9314_16525  pgeF; peptidoglycan editing factor PgeF [KO:K05810] [EC:2.4.2.1 2.4.2.28 3.5.4.4]
Q9314_13175  hpt; hypoxanthine phosphoribosyltransferase [KO:K00760] [EC:2.4.2.8]
Q9314_07095  guaB; IMP dehydrogenase [KO:K00088] [EC:1.1.1.205]
Q9314_04320  ndk; nucleoside-diphosphate kinase [KO:K00940] [EC:2.7.4.6]
Q9314_09370  rdgB; RdgB/HAM1 family non-canonical purine NTP pyrophosphatase [KO:K01519] [EC:3.6.1.66]
Q9314_00860  gpt; xanthine phosphoribosyltransferase [KO:K00769] [EC:2.4.2.22]
Q9314_10190  xdhA; xanthine dehydrogenase small subunit [KO:K13481] [EC:1.17.1.4]
Q9314_10185  xdhB; xanthine dehydrogenase molybdopterin binding subunit [KO:K13482] [EC:1.17.1.4]
Q9314_20295  paoC; aldehyde oxidoreductase molybdenum-binding subunit PaoC [KO:K11177] [EC:1.17.1.4]
Q9314_24195  xanthine dehydrogenase family protein molybdopterin-binding subunit [KO:K11177] [EC:1.17.1.4]
Q9314_24215  xanthine dehydrogenase family protein molybdopterin-binding subunit [KO:K11177] [EC:1.17.1.4]
Q9314_20290  xanthine dehydrogenase family protein subunit M [KO:K11178] [EC:1.17.1.4]
Q9314_24190  xanthine dehydrogenase family protein subunit M [KO:K11178] [EC:1.17.1.4]
Q9314_24210  xanthine dehydrogenase family protein subunit M [KO:K11178] [EC:1.17.1.4]
Q9314_20285  paoA; aldehyde dehydrogenase iron-sulfur subunit PaoA [KO:K13483]
Q9314_24185  2Fe-2S iron-sulfur cluster-binding protein [KO:K13483]
Q9314_24205  (2Fe-2S)-binding protein [KO:K13483]
Q9314_09605  guaA; glutamine-hydrolyzing GMP synthase [KO:K01951] [EC:6.3.5.2]
Q9314_12665  glutamine amidotransferase [KO:K01951] [EC:6.3.5.2]
Q9314_10155  guaD; guanine deaminase [KO:K01487] [EC:3.5.4.3]
Q9314_15985  guaD; guanine deaminase [KO:K01487] [EC:3.5.4.3]
Q9314_04420  gmk; guanylate kinase [KO:K00942] [EC:2.7.4.8]
Q9314_00855  vitamin B12-dependent ribonucleotide reductase [KO:K00525] [EC:1.17.4.1]
Q9314_06145  nrdE; class 1b ribonucleoside-diphosphate reductase subunit alpha [KO:K00525] [EC:1.17.4.1]
Q9314_06140  nrdF; class 1b ribonucleoside-diphosphate reductase subunit beta [KO:K00526] [EC:1.17.4.1]
Q9314_02155  deoxyguanosinetriphosphate triphosphohydrolase [KO:K01129] [EC:3.1.5.1]
Q9314_08155  anti-phage deoxyguanosine triphosphatase [KO:K01129] [EC:3.1.5.1]
Q9314_04640  HD family hydrolase [KO:K06952] [EC:3.1.3.89]
Q9314_04785  bifunctional (p)ppGpp synthetase/guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase [KO:K01139] [EC:2.7.6.5 3.1.7.2]
Q9314_05895  ppx; exopolyphosphatase [KO:K01524] [EC:3.6.1.11 3.6.1.40]
Q9314_07120  Ppx/GppA phosphatase family protein [KO:K01524] [EC:3.6.1.11 3.6.1.40]
Q9314_08735  adenylate/guanylate cyclase domain-containing protein [KO:K01768] [EC:4.6.1.1]
Q9314_15110  adenylosuccinate synthase [KO:K01939] [EC:6.3.4.4]
Q9314_09985  adenosine deaminase [KO:K01488] [EC:3.5.4.4]
Q9314_05210  AMP nucleosidase [KO:K01241] [EC:3.2.2.4]
Q9314_16125  ade; adenine deaminase [KO:K01486] [EC:3.5.4.2]
Q9314_14975  YmdB family metallophosphoesterase [KO:K09769] [EC:3.1.4.16]
Q9314_02335  adenylate kinase [KO:K00939] [EC:2.7.4.3]
Q9314_00635  mazG; nucleoside triphosphate pyrophosphohydrolase [KO:K04765] [EC:3.6.1.9]
Q9314_08755  phosphodiesterase [KO:K03651] [EC:3.1.4.53]
Q9314_06090  cysN; sulfate adenylyltransferase subunit CysN [KO:K00956] [EC:2.7.7.4]
Q9314_06085  cysD; sulfate adenylyltransferase subunit CysD [KO:K00957] [EC:2.7.7.4]
Q9314_10195  uraH; hydroxyisourate hydrolase [KO:K07127] [EC:3.5.2.17]
Q9314_15980  uraH; hydroxyisourate hydrolase [KO:K07127] [EC:3.5.2.17]
Q9314_13865  aspartate/glutamate racemase family protein [KO:K16841] [EC:5.1.99.3]
Q9314_26040  aspartate/glutamate racemase family protein [KO:K16841] [EC:5.1.99.3]
Q9314_17095  amidohydrolase family protein [KO:K01466] [EC:3.5.2.5]
Q9314_10200  puuE; allantoinase PuuE [KO:K16842] [EC:3.5.2.5]
Q9314_15965  puuE; allantoinase PuuE [KO:K16842] [EC:3.5.2.5]
Q9314_13955  bifunctional allantoicase/(S)-ureidoglycine aminohydrolase [KO:K14977] [EC:3.5.3.26]
Q9314_10205  ureidoglycolate lyase [KO:K01483] [EC:4.3.2.3]
Q9314_15975  ureidoglycolate lyase [KO:K01483] [EC:4.3.2.3]
Q9314_24670  ureidoglycolate lyase [KO:K01483] [EC:4.3.2.3]
Q9314_15525  ureC; urease subunit alpha [KO:K01428] [EC:3.5.1.5]
Q9314_22945  ureC; urease subunit alpha [KO:K01428] [EC:3.5.1.5]
Q9314_15510  urease subunit beta [KO:K01429] [EC:3.5.1.5]
Q9314_15500  urease subunit gamma [KO:K01430] [EC:3.5.1.5]
Q9314_22950  urease subunit gamma [KO:K14048] [EC:3.5.1.5]
Q9314_12200  arcC; carbamate kinase [KO:K00926] [EC:2.7.2.2]
Compound
C00002  ATP
C00008  ADP
C00011  CO2
C00014  Ammonia
C00020  AMP
C00035  GDP
C00037  Glycine
C00039  DNA
C00044  GTP
C00046  RNA
C00048  Glyoxylate
C00053  3'-Phosphoadenylyl sulfate
C00054  Adenosine 3',5'-bisphosphate
C00059  Sulfate
C00064  L-Glutamine
C00081  ITP
C00086  Urea
C00104  IDP
C00117  D-Ribose 5-phosphate
C00119  5-Phospho-alpha-D-ribose 1-diphosphate
C00130  IMP
C00131  dATP
C00144  GMP
C00147  Adenine
C00169  Carbamoyl phosphate
C00206  dADP
C00209  Oxalate
C00212  Adenosine
C00224  Adenylyl sulfate
C00242  Guanine
C00262  Hypoxanthine
C00286  dGTP
C00288  HCO3-
C00294  Inosine
C00301  ADP-ribose
C00330  Deoxyguanosine
C00360  dAMP
C00361  dGDP
C00362  dGMP
C00366  Urate
C00385  Xanthine
C00387  Guanosine
C00499  Allantoate
C00559  Deoxyadenosine
C00575  3',5'-Cyclic AMP
C00603  (S)-Ureidoglycolate
C00620  alpha-D-Ribose 1-phosphate
C00655  Xanthosine 5'-phosphate
C00700  XTP
C00802  Oxalureate
C00942  3',5'-Cyclic GMP
C01228  Guanosine 3',5'-bis(diphosphate)
C01260  P1,P4-Bis(5'-adenosyl)tetraphosphate
C01261  P1,P4-Bis(5'-guanosyl) tetraphosphate
C01344  dIDP
C01345  dITP
C01367  3'-AMP
C01444  Oxamate
C01762  Xanthosine
C02091  (S)-Ureidoglycine
C02348  (R)(-)-Allantoin
C02350  (S)-Allantoin
C02353  2',3'-Cyclic AMP
C02718  N-Formiminoglycine
C03090  5-Phosphoribosylamine
C03373  Aminoimidazole ribotide
C03483  Adenosine tetraphosphate
C03614  Inosine 5'-tetraphosphate
C03794  N6-(1,2-Dicarboxyethyl)-AMP
C03838  5'-Phosphoribosylglycinamide
C04051  5-Amino-4-imidazolecarboxyamide
C04376  5'-Phosphoribosyl-N-formylglycinamide
C04392  P1,P4-Bis(5'-xanthosyl) tetraphosphate
C04494  Guanosine 3'-diphosphate 5'-triphosphate
C04640  2-(Formamido)-N1-(5'-phosphoribosyl)acetamidine
C04677  1-(5'-Phosphoribosyl)-5-amino-4-imidazolecarboxamide
C04734  1-(5'-Phosphoribosyl)-5-formamido-4-imidazolecarboxamide
C04751  1-(5-Phospho-D-ribosyl)-5-amino-4-imidazolecarboxylate
C04823  1-(5'-Phosphoribosyl)-5-amino-4-(N-succinocarboxamide)-imidazole
C05239  5-Aminoimidazole
C05512  Deoxyinosine
C05513  Urate-3-ribonucleoside
C05515  5-Ureido-4-imidazole carboxylate
C05516  5-Amino-4-imidazole carboxylate
C05993  Acetyl adenylate
C06193  Guanosine 3'-phosphate
C06194  2',3'-Cyclic GMP
C06195  Imidazolone
C06196  2'-Deoxyinosine 5'-phosphate
C06197  P1,P3-Bis(5'-adenosyl) triphosphate
C06433  5'-Benzoylphosphoadenosine
C06435  5'-Butyrylphosphoinosine
C11821  5-Hydroxyisourate
C12248  5-Hydroxy-2-oxo-4-ureido-2,5-dihydro-1H-imidazole-5-carboxylate
C15667  5-Carboxyamino-1-(5-phospho-D-ribosyl)imidazole
C22395  N6-Succino-2-amino-2'-deoxyadenylate
C22441  dZMP
C22442  dZDP
C22443  dZTP
C22499  8-Hydroxyadenine
C22500  2,8-Dihydroxyadenine
Reference
PMID:10601204
  Authors
Cusa E, Obradors N, Baldoma L, Badia J, Aguilar J.
  Title
Genetic analysis of a chromosomal region containing genes required for assimilation of allantoin nitrogen and linked glyoxylate metabolism in Escherichia coli.
  Journal
J Bacteriol 181:7479-84 (1999)
DOI:10.1128/JB.181.24.7479-7484.1999
Reference
PMID:10986234
  Authors
Xi H, Schneider BL, Reitzer L.
  Title
Purine catabolism in Escherichia coli and function of xanthine dehydrogenase in purine salvage.
  Journal
J Bacteriol 182:5332-41 (2000)
DOI:10.1128/JB.182.19.5332-5341.2000
Related
pathway
ssum00030  Pentose phosphate pathway
ssum00220  Arginine biosynthesis
ssum00250  Alanine, aspartate and glutamate metabolism
ssum00260  Glycine, serine and threonine metabolism
ssum00340  Histidine metabolism
ssum00630  Glyoxylate and dicarboxylate metabolism
ssum00730  Thiamine metabolism
ssum00740  Riboflavin metabolism
ssum00790  Folate biosynthesis
KO pathway
ko00230   
LinkDB

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