PATHWAY: szo01100 Help Entry szo01100                    Pathway                                 Name Metabolic pathways - Shinella zoogloeoides Class BRITE hierarchy Pathway map szo01100   Metabolic pathways Module szo_M00002   Glycolysis, core module involving three-carbon compounds [PATH:szo01100] szo_M00004   Pentose phosphate pathway (Pentose phosphate cycle) [PATH:szo01100] szo_M00005   PRPP biosynthesis, ribose 5P => PRPP [PATH:szo01100] szo_M00006   Pentose phosphate pathway, oxidative phase, glucose 6P => ribulose 5P [PATH:szo01100] szo_M00007   Pentose phosphate pathway, non-oxidative phase, fructose 6P => ribose 5P [PATH:szo01100] szo_M00008   Entner-Doudoroff pathway, glucose-6P => glyceraldehyde-3P + pyruvate [PATH:szo01100] szo_M00009   Citrate cycle (TCA cycle, Krebs cycle) [PATH:szo01100] szo_M00010   Citrate cycle, first carbon oxidation, oxaloacetate => 2-oxoglutarate [PATH:szo01100] szo_M00011   Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate [PATH:szo01100] szo_M00012   Glyoxylate cycle [PATH:szo01100] szo_M00015   Proline biosynthesis, glutamate => proline [PATH:szo01100] szo_M00016   Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine [PATH:szo01100] szo_M00017   Methionine biosynthesis, aspartate => homoserine => methionine [PATH:szo01100] szo_M00018   Threonine biosynthesis, aspartate => homoserine => threonine [PATH:szo01100] szo_M00019   Valine/isoleucine biosynthesis, pyruvate => valine / 2-oxobutanoate => isoleucine [PATH:szo01100] szo_M00020   Serine biosynthesis, glycerate-3P => serine [PATH:szo01100] szo_M00021   Cysteine biosynthesis, serine => cysteine [PATH:szo01100] szo_M00022   Shikimate pathway, phosphoenolpyruvate + erythrose-4P => chorismate [PATH:szo01100] szo_M00023   Tryptophan biosynthesis, chorismate => tryptophan [PATH:szo01100] szo_M00024   Phenylalanine biosynthesis, chorismate => phenylpyruvate => phenylalanine [PATH:szo01100] szo_M00026   Histidine biosynthesis, PRPP => histidine [PATH:szo01100] szo_M00028   Ornithine biosynthesis, glutamate => ornithine [PATH:szo01100] szo_M00040   Tyrosine biosynthesis, chorismate => arogenate => tyrosine [PATH:szo01100] szo_M00044   Tyrosine degradation, tyrosine => homogentisate [PATH:szo01100] szo_M00045   Histidine degradation, histidine => N-formiminoglutamate => glutamate [PATH:szo01100] szo_M00046   Pyrimidine degradation, uracil => beta-alanine, thymine => 3-aminoisobutanoate [PATH:szo01100] szo_M00048   De novo purine biosynthesis, PRPP + glutamine => IMP [PATH:szo01100] szo_M00049   Adenine ribonucleotide biosynthesis, IMP => ADP,ATP [PATH:szo01100] szo_M00050   Guanine ribonucleotide biosynthesis, IMP => GDP,GTP [PATH:szo01100] szo_M00052   Pyrimidine ribonucleotide biosynthesis, UMP => UDP/UTP,CDP/CTP [PATH:szo01100] szo_M00053   Deoxyribonucleotide biosynthesis, ADP/GDP/CDP/UDP => dATP/dGTP/dCTP/dUTP [PATH:szo01100] szo_M00082   Fatty acid biosynthesis, initiation [PATH:szo01100] szo_M00083   Fatty acid biosynthesis, elongation [PATH:szo01100] szo_M00086   beta-Oxidation, acyl-CoA synthesis [PATH:szo01100] szo_M00091   Phosphatidylcholine (PC) biosynthesis, PE => PC [PATH:szo01100] szo_M00093   Phosphatidylethanolamine (PE) biosynthesis, PA => PS => PE [PATH:szo01100] szo_M00115   NAD biosynthesis, aspartate => quinolinate => NAD [PATH:szo01100] szo_M00118   Glutathione biosynthesis, glutamate => glutathione [PATH:szo01100] szo_M00120   Coenzyme A biosynthesis, pantothenate => CoA [PATH:szo01100] szo_M00134   Polyamine biosynthesis, arginine => ornithine => putrescine [PATH:szo01100] szo_M00140   C1-unit interconversion, prokaryotes [PATH:szo01100] szo_M00144   NADH:quinone oxidoreductase, prokaryotes [PATH:szo01100] szo_M00149   Succinate dehydrogenase, prokaryotes [PATH:szo01100] szo_M00151   Cytochrome bc1 complex respiratory unit [PATH:szo01100] szo_M00155   Cytochrome c oxidase, prokaryotes [PATH:szo01100] szo_M00156   Cytochrome c oxidase, cbb3-type [PATH:szo01100] szo_M00157   F-type ATPase, prokaryotes and chloroplasts [PATH:szo01100] szo_M00169   CAM (Crassulacean acid metabolism), light [PATH:szo01100] szo_M00307   Pyruvate oxidation, pyruvate => acetyl-CoA [PATH:szo01100] szo_M00417   Cytochrome o ubiquinol oxidase [PATH:szo01100] szo_M00432   Leucine biosynthesis, 2-oxoisovalerate => 2-oxoisocaproate [PATH:szo01100] szo_M00549   Nucleotide sugar biosynthesis, glucose => UDP-glucose [PATH:szo01100] szo_M00552   D-galactonate degradation, De Ley-Doudoroff pathway, D-galactonate => glycerate-3P [PATH:szo01100] szo_M00555   Betaine biosynthesis, choline => betaine [PATH:szo01100] szo_M00570   Isoleucine biosynthesis, threonine => 2-oxobutanoate => isoleucine [PATH:szo01100] szo_M00579   Phosphate acetyltransferase-acetate kinase pathway, acetyl-CoA => acetate [PATH:szo01100] szo_M00621   Glycine cleavage system [PATH:szo01100] szo_M00741   Propanoyl-CoA metabolism, propanoyl-CoA => succinyl-CoA [PATH:szo01100] szo_M00844   Arginine biosynthesis, ornithine => arginine [PATH:szo01100] szo_M00854   Glycogen biosynthesis, glucose-1P => glycogen/starch [PATH:szo01100] szo_M00880   Molybdenum cofactor biosynthesis, GTP => molybdenum cofactor [PATH:szo01100] szo_M00881   Lipoic acid biosynthesis, plants and bacteria, octanoyl-ACP => dihydrolipoyl-E2/H [PATH:szo01100] szo_M00909   UDP-N-acetyl-D-glucosamine biosynthesis, prokaryotes, glucose => UDP-GlcNAc [PATH:szo01100] szo_M00925   Cobalamin biosynthesis, aerobic, uroporphyrinogen III => precorrin 2 => cobyrinate a,c-diamide [PATH:szo01100] szo_M00938   Pyrimidine deoxyribonucleotide biosynthesis, UDP => dTTP [PATH:szo01100] szo_M00958   Adenine ribonucleotide degradation, AMP => Urate [PATH:szo01100] szo_M00959   Guanine ribonucleotide degradation, GMP => Urate [PATH:szo01100] szo_M00970   Proline degradation, proline => glutamate [PATH:szo01100] szo_M00975   Betaine degradation, bacteria, betaine => pyruvate [PATH:szo01100] Organism Shinella zoogloeoides [GN:szo] Related pathway szo00010   Glycolysis / Gluconeogenesis szo00020   Citrate cycle (TCA cycle) szo00030   Pentose phosphate pathway szo00040   Pentose and glucuronate interconversions szo00051   Fructose and mannose metabolism szo00052   Galactose metabolism szo00053   Ascorbate and aldarate metabolism szo00061   Fatty acid biosynthesis szo00062   Fatty acid elongation szo00071   Fatty acid degradation szo00130   Ubiquinone and other terpenoid-quinone biosynthesis szo00190   Oxidative phosphorylation szo00220   Arginine biosynthesis szo00230   Purine metabolism szo00240   Pyrimidine metabolism szo00250   Alanine, aspartate and glutamate metabolism szo00260   Glycine, serine and threonine metabolism szo00261   Monobactam biosynthesis szo00270   Cysteine and methionine metabolism szo00280   Valine, leucine and isoleucine degradation szo00290   Valine, leucine and isoleucine biosynthesis szo00300   Lysine biosynthesis szo00310   Lysine degradation szo00330   Arginine and proline metabolism szo00332   Carbapenem biosynthesis szo00340   Histidine metabolism szo00350   Tyrosine metabolism szo00360   Phenylalanine metabolism szo00361   Chlorocyclohexane and chlorobenzene degradation szo00362   Benzoate degradation szo00380   Tryptophan metabolism szo00400   Phenylalanine, tyrosine and tryptophan biosynthesis szo00401   Novobiocin biosynthesis szo00410   beta-Alanine metabolism szo00430   Taurine and hypotaurine metabolism szo00450   Selenocompound metabolism szo00460   Cyanoamino acid metabolism szo00470   D-Amino acid metabolism szo00480   Glutathione metabolism szo00500   Starch and sucrose metabolism szo00511   Other glycan degradation szo00520   Amino sugar and nucleotide sugar metabolism szo00521   Streptomycin biosynthesis szo00540   Lipopolysaccharide biosynthesis szo00541   O-Antigen nucleotide sugar biosynthesis szo00543   Exopolysaccharide biosynthesis szo00550   Peptidoglycan biosynthesis szo00552   Teichoic acid biosynthesis szo00561   Glycerolipid metabolism szo00562   Inositol phosphate metabolism szo00564   Glycerophospholipid metabolism szo00600   Sphingolipid metabolism szo00620   Pyruvate metabolism szo00622   Xylene degradation szo00625   Chloroalkane and chloroalkene degradation szo00626   Naphthalene degradation szo00627   Aminobenzoate degradation szo00630   Glyoxylate and dicarboxylate metabolism szo00633   Nitrotoluene degradation szo00640   Propanoate metabolism szo00643   Styrene degradation szo00650   Butanoate metabolism szo00660   C5-Branched dibasic acid metabolism szo00670   One carbon pool by folate szo00680   Methane metabolism szo00730   Thiamine metabolism szo00740   Riboflavin metabolism szo00750   Vitamin B6 metabolism szo00760   Nicotinate and nicotinamide metabolism szo00770   Pantothenate and CoA biosynthesis szo00780   Biotin metabolism szo00785   Lipoic acid metabolism szo00790   Folate biosynthesis szo00791   Atrazine degradation szo00860   Porphyrin metabolism szo00900   Terpenoid backbone biosynthesis szo00906   Carotenoid biosynthesis szo00907   Pinene, camphor and geraniol degradation szo00910   Nitrogen metabolism szo00920   Sulfur metabolism szo00930   Caprolactam degradation szo00946   Degradation of flavonoids szo00999   Biosynthesis of various plant secondary metabolites szo01040   Biosynthesis of unsaturated fatty acids KO pathway ko01100     LinkDB All DBs

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