PATHWAY: tde02010 Help
Entry
Name
ABC transporters - Treponema denticola
Description
The ATP-binding cassette (ABC) transporters form one of the largest known protein families, and are widespread in bacteria, archaea, and eukaryotes. They couple ATP hydrolysis to active transport of a wide variety of substrates such as ions, sugars, lipids, sterols, peptides, proteins, and drugs. The structure of a prokaryotic ABC transporter usually consists of three components; typically two integral membrane proteins each having six transmembrane segments, two peripheral proteins that bind and hydrolyze ATP, and a periplasmic (or lipoprotein) substrate-binding protein. Many of the genes for the three components form operons as in fact observed in many bacterial and archaeal genomes. On the other hand, in a typical eukaryotic ABC transporter, the membrane spanning protein and the ATP-binding protein are fused, forming a multi-domain protein with the membrane-spanning domain (MSD) and the nucleotide-binding domain (NBD).
Class
Environmental Information Processing; Membrane transport
BRITE hierarchy
Pathway map
Ortholog table
Other DBs
Organism
Treponema denticola [GN:
tde ]
Gene
TDE_0386 ABC transporter, periplasmic substrate-binding protein [KO:K02012 ]
TDE_0143 thiamine ABC transporter, thiamine-binding protein [KO:K02064 ]
TDE_2215 galactoside ABC transporter, permease protein, putative [KO:K10541 ]
TDE_0926 phosphonate ABC transporter, permease protein, putative [KO:K02042 ]
TDE_0927 phosphonate ABC transporter, permease protein, putative [KO:K02042 ]
TDE_2361 high-affinity branched chain amino acid ABC transporter, amino acid-binding protein [KO:K01999 ]
TDE_2366 high-affinity branched-chain amino acid ABC transporter, permease protein [KO:K01997 ]
TDE_2365 high-affinity branched-chain amino acid ABC transporter, permease protein [KO:K01998 ]
TDE_2364 high-affinity branched-chain amino acid ABC transporter, ATP-binding protein [KO:K01995 ]
TDE_2363 high-affinity branched chain amino acid ABC transporter, ATP-binding protein [KO:K01996 ]
TDE_2049 bacterial extracellular solute-binding proteins, family 5 [KO:K15580 ]
TDE_0639 oligopeptide/dipeptide ABC transporter, permease protein [KO:K15581 ]
TDE_0638 oligopeptide/dipeptide ABC transporter, permease protein [KO:K15582 ]
TDE_0637 oligopeptide/dipeptide ABC transporter, ATP-binding protein [KO:K15583 ]
TDE_0636 oligopeptide/dipeptide ABC transporter, ATP-binding protein [KO:K10823 ]
TDE_1067 oligopeptide/dipeptide ABC transporter, ATP-binding protein [KO:K10823 ]
TDE_0985 oligopeptide/dipeptide ABC transporter, periplasmic peptide-binding protein, putative [KO:K13893 ]
TDE_0988 oligopeptide/dipeptide ABC transporter, peptide-binding protein [KO:K13893 ]
TDE_0984 oligopeptide/dipeptide ABC transporter, permease protein, putative [KO:K13895 ]
TDE_2226 ABC transporter, substrate-binding protein, putative [KO:K09815 ]
TDE_2562 cation ABC transporter, permease protein, putative [KO:K09816 ]
TDE_1226 troA; zinc ABC transporter, periplasmic zinc-binding protein [KO:K11707 ]
TDE_2132 cobalt ABC transporter, ATP-binding protein, putative [KO:K02006 ]
TDE_1650 ABC transporter, ATP-binding protein [KO:K16784 ] [EC:7.6.2.-]
TDE_0953 branched-chain amino acid ABC transporter, permease protein [KO:K23511 ]
TDE_0954 branched-chain amino acid ABC transporter, permease protein [KO:K23512 ]
TDE_2039 lipoprotein releasing system, permease protein, putative [KO:K09808 ]
TDE_2041 lipoprotein releasing system, permease protein, putative [KO:K09808 ]
TDE_2040 lolD; lipoprotein releasing system, ATP-binding protein [KO:K09810 ] [EC:7.6.2.-]
TDE_0245 ABC transporter, ATP-binding/permease protein [KO:K14698 ] [EC:7.-.-.-]
TDE_0274 ABC transporter, ATP-binding/permease protein [KO:K14698 ] [EC:7.-.-.-]
TDE_0819 ABC transporter, ATP-binding/permease protein [KO:K14698 ] [EC:7.-.-.-]
TDE_0896 ABC transporter, ATP-binding/permease protein [KO:K14698 ] [EC:7.-.-.-]
TDE_0908 ABC transporter, ATP-binding/permease protein [KO:K14698 ] [EC:7.-.-.-]
TDE_0924 ABC transporter, ATP-binding/permease protein [KO:K14698 ] [EC:7.-.-.-]
TDE_1600 ABC transporter, ATP-binding/permease protein [KO:K14698 ] [EC:7.-.-.-]
TDE_2007 ABC transporter, ATP-binding/permease protein [KO:K14698 ] [EC:7.-.-.-]
TDE_2626 ABC transporter, ATP-binding/permease protein [KO:K14698 ] [EC:7.-.-.-]
TDE_0244 ABC transporter, ATP-binding/permease protein [KO:K14699 ] [EC:7.-.-.-]
TDE_0273 ABC transporter, ATP-binding/permease protein [KO:K14699 ] [EC:7.-.-.-]
TDE_0818 ABC transporter, ATP-binding/permease protein [KO:K14699 ] [EC:7.-.-.-]
TDE_0897 ABC transporter, ATP-binding/permease protein [KO:K14699 ] [EC:7.-.-.-]
TDE_0916 ABC transporter, ATP-binding/permease protein [KO:K14699 ] [EC:7.-.-.-]
TDE_0923 ABC transporter, ATP-binding/permease protein [KO:K14699 ] [EC:7.-.-.-]
TDE_1599 ABC transporter, ATP-binding/permease protein [KO:K14699 ] [EC:7.-.-.-]
TDE_2008 ABC transporter, ATP-binding/permease protein [KO:K14699 ] [EC:7.-.-.-]
TDE_2625 ABC transporter, ATP-binding/permease protein [KO:K14699 ] [EC:7.-.-.-]
TDE_0425 bacteriocin ABC transporter, ATP-binding/permease, putative [KO:K20344 ]
TDE_0719 bacteriocin ABC transporter, ATP-binding/permease protein, putative [KO:K20344 ]
TDE_2431 bacteriocin ABC transporter, ATP-binding/permease protein, putative [KO:K20344 ]
Compound
C00093 sn-Glycerol 3-phosphate
C01153 Orthophosphoric monoester
C01181 4-Trimethylammoniobutanoate
C01279 4-Amino-5-hydroxymethyl-2-methylpyrimidine
C03557 2-Aminoethylphosphonate
C03611 Galactose oligosaccharide
C03619 Methyl beta-D-galactoside
C04114 (E)-4-(Trimethylammonio)but-2-enoate
C06705 Capsular polysaccharide
C19872 N-Formyl-4-amino-5-aminomethyl-2-methylpyrimidine
C20570 alpha-1,5-L-Arabinobiose
C20571 alpha-1,5-L-Arabinotriose
C20572 alpha-1,5-L-Arabinotetraose
Reference
Authors
Tomii K, Kanehisa M.
Title
A comparative analysis of ABC transporters in complete microbial genomes.
Journal
Reference
Authors
Sperandeo P, Lau FK, Carpentieri A, De Castro C, Molinaro A, Deho G, Silhavy TJ, Polissi A
Title
Functional analysis of the protein machinery required for transport of lipopolysaccharide to the outer membrane of Escherichia coli.
Journal
Reference
Authors
Ruiz N, Gronenberg LS, Kahne D, Silhavy TJ
Title
Identification of two inner-membrane proteins required for the transport of lipopolysaccharide to the outer membrane of Escherichia coli.
Journal
Reference
Authors
Omata T, Price GD, Badger MR, Okamura M, Gohta S, Ogawa T
Title
Identification of an ATP-binding cassette transporter involved in bicarbonate uptake in the cyanobacterium Synechococcus sp. strain PCC 7942.
Journal
Reference
Authors
Quintero MJ, Montesinos ML, Herrero A, Flores E
Title
Identification of genes encoding amino acid permeases by inactivation of selected ORFs from the Synechocystis genomic sequence.
Journal
Reference
Authors
Picossi S, Montesinos ML, Pernil R, Lichtle C, Herrero A, Flores E
Title
ABC-type neutral amino acid permease N-I is required for optimal diazotrophic growth and is repressed in the heterocysts of Anabaena sp. strain PCC 7120.
Journal
Reference
Authors
Valladares A, Montesinos ML, Herrero A, Flores E.
Title
An ABC-type, high-affinity urea permease identified in cyanobacteria.
Journal
Reference
Authors
Richard-Fogal CL, Frawley ER, Kranz RG
Title
Topology and function of CcmD in cytochrome c maturation.
Journal
Reference
Authors
Suzuki H, Koyanagi T, Izuka S, Onishi A, Kumagai H
Title
The yliA, -B, -C, and -D genes of Escherichia coli K-12 encode a novel glutathione importer with an ATP-binding cassette.
Journal
Reference
Authors
Novikova M, Metlitskaya A, Datsenko K, Kazakov T, Kazakov A, Wanner B, Severinov K
Title
The Escherichia coli Yej transporter is required for the uptake of translation inhibitor microcin C.
Journal
Reference
Authors
Tikhonova EB, Devroy VK, Lau SY, Zgurskaya HI
Title
Reconstitution of the Escherichia coli macrolide transporter: the periplasmic membrane fusion protein MacA stimulates the ATPase activity of MacB.
Journal
Reference
Authors
Yamanaka H, Kobayashi H, Takahashi E, Okamoto K
Title
MacAB is involved in the secretion of Escherichia coli heat-stable enterotoxin II.
Journal
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