KEGG   PATHWAY: thj00630
Entry
thj00630                    Pathway                                
Name
Glyoxylate and dicarboxylate metabolism - Tarenaya hassleriana (spider flower)
Class
Metabolism; Carbohydrate metabolism
Pathway map
thj00630  Glyoxylate and dicarboxylate metabolism
thj00630

Module
thj_M00012  Glyoxylate cycle [PATH:thj00630]
thj_M00532  Photorespiration [PATH:thj00630]
thj_M00621  Glycine cleavage system [PATH:thj00630]
Other DBs
GO: 0046487 0043648
Organism
Tarenaya hassleriana (spider flower) [GN:thj]
Gene
104808494  isocitrate lyase isoform X1 [KO:K01637] [EC:4.1.3.1]
104809015  acetyl-coenzyme A synthetase, chloroplastic/glyoxysomal-like isoform X1 [KO:K01895] [EC:6.2.1.1]
104809016  acetyl-coenzyme A synthetase, chloroplastic/glyoxysomal-like [KO:K01895] [EC:6.2.1.1]
104815254  acetyl-coenzyme A synthetase, chloroplastic/glyoxysomal [KO:K01895] [EC:6.2.1.1]
104820275  acetate/butyrate--CoA ligase AAE7, peroxisomal isoform X1 [KO:K01913] [EC:6.2.1.1 6.2.1.2]
104802600  acetate/butyrate--CoA ligase AAE7, peroxisomal [KO:K01913] [EC:6.2.1.1 6.2.1.2]
104820274  acetate/butyrate--CoA ligase AAE7, peroxisomal-like isoform X1 [KO:K01913] [EC:6.2.1.1 6.2.1.2]
104825008  malate synthase [KO:K01638] [EC:2.3.3.9]
104808620  malate dehydrogenase, cytoplasmic 2-like [KO:K00025] [EC:1.1.1.37]
104806834  malate dehydrogenase, cytoplasmic isoform X1 [KO:K00025] [EC:1.1.1.37]
104801085  malate dehydrogenase, cytoplasmic 1-like [KO:K00025] [EC:1.1.1.37]
104826085  malate dehydrogenase, cytoplasmic 2 [KO:K00025] [EC:1.1.1.37]
104807857  probable malate dehydrogenase, glyoxysomal [KO:K00026] [EC:1.1.1.37]
104799628  malate dehydrogenase 2, glyoxysomal-like [KO:K00026] [EC:1.1.1.37]
104804850  malate dehydrogenase 1, mitochondrial-like [KO:K00026] [EC:1.1.1.37]
104821420  malate dehydrogenase, chloroplastic [KO:K00026] [EC:1.1.1.37]
104818455  malate dehydrogenase 2, glyoxysomal [KO:K00026] [EC:1.1.1.37]
104815567  malate dehydrogenase 1, mitochondrial [KO:K00026] [EC:1.1.1.37]
104802267  citrate synthase 3, peroxisomal [KO:K01647] [EC:2.3.3.1]
104803095  citrate synthase 2, peroxisomal [KO:K01647] [EC:2.3.3.1]
104817150  citrate synthase 4, mitochondrial isoform X1 [KO:K01647] [EC:2.3.3.1]
104808872  aconitate hydratase, cytoplasmic [KO:K01681] [EC:4.2.1.3]
104806229  aconitate hydratase 1-like [KO:K01681] [EC:4.2.1.3]
104804279  aconitate hydratase 1 [KO:K01681] [EC:4.2.1.3]
104819035  acetyl-CoA acetyltransferase, cytosolic 1 [KO:K00626] [EC:2.3.1.9]
104812791  probable acetyl-CoA acetyltransferase, cytosolic 2 isoform X1 [KO:K00626] [EC:2.3.1.9]
104810375  peroxisomal (S)-2-hydroxy-acid oxidase GLO4-like isoform X1 [KO:K11517] [EC:1.1.3.15]
104812859  peroxisomal (S)-2-hydroxy-acid oxidase GLO5 [KO:K11517] [EC:1.1.3.15]
104813976  peroxisomal (S)-2-hydroxy-acid oxidase GLO1-like [KO:K11517] [EC:1.1.3.15]
104822663  peroxisomal (S)-2-hydroxy-acid oxidase GLO4 [KO:K11517] [EC:1.1.3.15]
104815588  peroxisomal (S)-2-hydroxy-acid oxidase GLO1 [KO:K11517] [EC:1.1.3.15]
104809803  catalase isozyme 3-like [KO:K03781] [EC:1.11.1.6]
104806920  catalase-2 isoform X2 [KO:K03781] [EC:1.11.1.6]
104801957  catalase-2-like [KO:K03781] [EC:1.11.1.6]
104811468  catalase-3-like [KO:K03781] [EC:1.11.1.6]
104811469  catalase-2-like [KO:K03781] [EC:1.11.1.6]
104809432  glyoxylate/hydroxypyruvate reductase HPR3 [KO:K15919] [EC:1.1.1.79 1.1.1.81]
104800424  glyoxylate/hydroxypyruvate reductase A HPR2 [KO:K15919] [EC:1.1.1.79 1.1.1.81]
104827621  glyoxylate/hydroxypyruvate reductase HPR3-like [KO:K15919] [EC:1.1.1.79 1.1.1.81]
104808825  glyoxylate/succinic semialdehyde reductase 1 [KO:K18121] [EC:1.1.1.79 1.1.1.-]
104807808  LOW QUALITY PROTEIN: glycerate dehydrogenase HPR, peroxisomal-like [KO:K15893] [EC:1.1.1.29]
104824763  glycerate dehydrogenase HPR, peroxisomal-like [KO:K15893] [EC:1.1.1.29]
104805692  phosphoglycolate phosphatase 1B, chloroplastic-like [KO:K19269] [EC:3.1.3.18 3.1.3.48]
104824388  phosphoglycolate phosphatase 2 [KO:K19269] [EC:3.1.3.18 3.1.3.48]
32981798  rbcL; ribulose-1 [KO:K01601] [EC:4.1.1.39]
104803942  ribulose bisphosphate carboxylase small chain clone 512-like isoform X1 [KO:K01602] [EC:4.1.1.39]
104800009  ribulose bisphosphate carboxylase small chain, chloroplastic-like [KO:K01602] [EC:4.1.1.39]
104805566  LOW QUALITY PROTEIN: ribulose bisphosphate carboxylase small chain, chloroplastic-like [KO:K01602] [EC:4.1.1.39]
104821932  ribulose bisphosphate carboxylase small chain, chloroplastic-like [KO:K01602] [EC:4.1.1.39]
104826484  serine--glyoxylate aminotransferase [KO:K00830] [EC:2.6.1.44 2.6.1.45 2.6.1.51]
104822983  glutamate--glyoxylate aminotransferase 2 [KO:K14272] [EC:2.6.1.4 2.6.1.2 2.6.1.44]
104803262  LOW QUALITY PROTEIN: ferredoxin-dependent glutamate synthase 2, chloroplastic [KO:K00284] [EC:1.4.7.1]
104816414  ferredoxin-dependent glutamate synthase 1, chloroplastic/mitochondrial [KO:K00284] [EC:1.4.7.1]
104802940  glutamine synthetase nodule isozyme [KO:K01915] [EC:6.3.1.2]
104805629  glutamine synthetase nodule isozyme-like isoform X1 [KO:K01915] [EC:6.3.1.2]
104823838  glutamine synthetase nodule isozyme [KO:K01915] [EC:6.3.1.2]
104826605  glutamine synthetase, chloroplastic/mitochondrial-like [KO:K01915] [EC:6.3.1.2]
104815345  glutamine synthetase, chloroplastic/mitochondrial [KO:K01915] [EC:6.3.1.2]
104821826  glutamine synthetase nodule isozyme-like [KO:K01915] [EC:6.3.1.2]
104820336  glutamine synthetase cytosolic isozyme 1-3 [KO:K01915] [EC:6.3.1.2]
104800174  serine hydroxymethyltransferase 6 [KO:K00600] [EC:2.1.2.1]
104799847  serine hydroxymethyltransferase 2, mitochondrial [KO:K00600] [EC:2.1.2.1]
104806802  serine hydroxymethyltransferase 7-like [KO:K00600] [EC:2.1.2.1]
104798675  serine hydroxymethyltransferase 2, mitochondrial-like [KO:K00600] [EC:2.1.2.1]
104804798  serine hydroxymethyltransferase 4 [KO:K00600] [EC:2.1.2.1]
104807662  serine hydroxymethyltransferase 1, mitochondrial [KO:K00600] [EC:2.1.2.1]
104816961  serine hydroxymethyltransferase 7 [KO:K00600] [EC:2.1.2.1]
104824922  serine hydroxymethyltransferase 1, mitochondrial [KO:K00600] [EC:2.1.2.1]
104823505  serine hydroxymethyltransferase 3, chloroplastic [KO:K00600] [EC:2.1.2.1]
104803730  glycine dehydrogenase (decarboxylating) 1, mitochondrial [KO:K00281] [EC:1.4.4.2]
104799166  glycine dehydrogenase (decarboxylating) 1, mitochondrial-like [KO:K00281] [EC:1.4.4.2]
104809494  aminomethyltransferase, mitochondrial [KO:K00605] [EC:2.1.2.10]
104820298  dihydrolipoyl dehydrogenase 2, chloroplastic [KO:K00382] [EC:1.8.1.4]
104820322  dihydrolipoyl dehydrogenase 1, mitochondrial [KO:K00382] [EC:1.8.1.4]
104821792  dihydrolipoyl dehydrogenase 2, chloroplastic-like [KO:K00382] [EC:1.8.1.4]
104818858  dihydrolipoyl dehydrogenase 1, mitochondrial-like [KO:K00382] [EC:1.8.1.4]
104798552  glycine cleavage system H protein 2, mitochondrial [KO:K02437]
104807965  glycine cleavage system H protein 3, mitochondrial [KO:K02437]
104812750  glycine cleavage system H protein 3, mitochondrial-like [KO:K02437]
104812706  glycine cleavage system H protein 2, mitochondrial [KO:K02437]
104811556  glycine cleavage system H protein 2, mitochondrial-like [KO:K02437]
104808210  D-glycerate 3-kinase, chloroplastic-like [KO:K15918] [EC:2.7.1.31]
104812476  D-glycerate 3-kinase, chloroplastic [KO:K15918] [EC:2.7.1.31]
104822387  formate dehydrogenase, chloroplastic/mitochondrial [KO:K00122] [EC:1.17.1.9]
104806664  formyltetrahydrofolate deformylase 2, mitochondrial [KO:K01433] [EC:3.5.1.10]
104819873  uncharacterized protein LOC104819873 isoform X1 [KO:K01455] [EC:3.5.1.49]
104808461  oxalate--CoA ligase [KO:K22133] [EC:6.2.1.8]
104821545  LOW QUALITY PROTEIN: oxalate--CoA ligase [KO:K22133] [EC:6.2.1.8]
Compound
C00007  Oxygen
C00011  CO2
C00014  Ammonia
C00022  Pyruvate
C00024  Acetyl-CoA
C00025  L-Glutamate
C00026  2-Oxoglutarate
C00027  Hydrogen peroxide
C00033  Acetate
C00036  Oxaloacetate
C00037  Glycine
C00042  Succinate
C00048  Glyoxylate
C00058  Formate
C00064  L-Glutamine
C00065  L-Serine
C00091  Succinyl-CoA
C00100  Propanoyl-CoA
C00111  Glycerone phosphate
C00136  Butanoyl-CoA
C00149  (S)-Malate
C00158  Citrate
C00160  Glycolate
C00168  Hydroxypyruvate
C00197  3-Phospho-D-glycerate
C00209  Oxalate
C00258  D-Glycerate
C00266  Glycolaldehyde
C00311  Isocitrate
C00313  Oxalyl-CoA
C00332  Acetoacetyl-CoA
C00417  cis-Aconitate
C00552  meso-Tartaric acid
C00631  2-Phospho-D-glycerate
C00683  (S)-Methylmalonyl-CoA
C00798  Formyl-CoA
C00877  Crotonoyl-CoA
C00888  Pentanoyl-CoA
C00898  (R,R)-Tartaric acid
C00975  Dihydroxyfumarate
C00988  2-Phosphoglycolate
C01127  4-Hydroxy-2-oxoglutarate
C01146  2-Hydroxy-3-oxopropanoate
C01182  D-Ribulose 1,5-bisphosphate
C01213  (R)-Methylmalonyl-CoA
C01380  Ethylene glycol
C01732  Mesaconate
C01989  3-Ethylmalate
C01990  3-Oxalomalate
C02123  3-Propylmalate
C02405  Formyl phosphate
C03217  2-Hydroxy-3-oxoadipate
C03459  2-Hydroxy-3-oxosuccinate
C03548  trans-2,3-Epoxysuccinate
C03561  (R)-3-Hydroxybutanoyl-CoA
C03618  L-threo-3-Methylaspartate
C04348  L-Malyl-CoA
C06027  L-erythro-3-Methylmalyl-CoA
C06028  2-Methylfumaryl-CoA
C06049  N-Formylderivatives
C18026  (2S)-Ethylmalonyl-CoA
C18324  (2S)-Methylsuccinyl-CoA
C20238  (2R)-Ethylmalonyl-CoA
C22337  D-Ribulose 1-phosphate
Reference
PMID:10978349
  Authors
Njau RK, Herndon CA, Hawes JW.
  Title
Novel beta-hydroxyacid dehydrogenases in Escherichia coli and Haemophilus influenzae.
  Journal
J Biol Chem 275:38780-6 (2000)
DOI:10.1074/jbc.M007432200
Reference
PMID:18065535
  Authors
Zarzycki J, Schlichting A, Strychalsky N, Muller M, Alber BE, Fuchs G
  Title
Mesaconyl-coenzyme A hydratase, a new enzyme of two central carbon metabolic pathways in bacteria.
  Journal
J Bacteriol 190:1366-74 (2008)
DOI:10.1128/JB.01621-07
Reference
PMID:18819910
  Authors
Erb TJ, Retey J, Fuchs G, Alber BE
  Title
Ethylmalonyl-CoA mutase from Rhodobacter sphaeroides defines a new subclade of coenzyme B12-dependent acyl-CoA mutases.
  Journal
J Biol Chem 283:32283-93 (2008)
DOI:10.1074/jbc.M805527200
Reference
PMID:9596633
  Authors
Coschigano KT, Melo-Oliveira R, Lim J, Coruzzi GM
  Title
Arabidopsis gls mutants and distinct Fd-GOGAT genes. Implications for photorespiration and primary nitrogen assimilation.
  Journal
Plant Cell 10:741-52 (1998)
DOI:10.1105/tpc.10.5.741
Reference
PMID:16407450
  Authors
Masclaux-Daubresse C, Reisdorf-Cren M, Pageau K, Lelandais M, Grandjean O, Kronenberger J, Valadier MH, Feraud M, Jouglet T, Suzuki A
  Title
Glutamine synthetase-glutamate synthase pathway and glutamate dehydrogenase play distinct roles in the sink-source nitrogen cycle in tobacco.
  Journal
Plant Physiol 140:444-56 (2006)
DOI:10.1104/pp.105.071910
Reference
PMID:21252347
  Authors
Khomyakova M, Bukmez O, Thomas LK, Erb TJ, Berg IA
  Title
A methylaspartate cycle in haloarchaea.
  Journal
Science 331:334-7 (2011)
DOI:10.1126/science.1196544
Reference
PMID:11513957
  Authors
Serrano JA, Bonete MJ
  Title
Sequencing, phylogenetic and transcriptional analysis of the glyoxylate bypass operon (ace) in the halophilic archaeon Haloferax volcanii.
  Journal
Biochim Biophys Acta 1520:154-62 (2001)
DOI:10.1016/S0167-4781(01)00263-9
Related
pathway
thj00010  Glycolysis / Gluconeogenesis
thj00020  Citrate cycle (TCA cycle)
thj00030  Pentose phosphate pathway
thj00053  Ascorbate and aldarate metabolism
thj00071  Fatty acid degradation
thj00230  Purine metabolism
thj00250  Alanine, aspartate and glutamate metabolism
thj00260  Glycine, serine and threonine metabolism
thj00620  Pyruvate metabolism
thj00710  Carbon fixation by Calvin cycle
thj00750  Vitamin B6 metabolism
thj00910  Nitrogen metabolism
KO pathway
ko00630   
LinkDB

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