KEGG   PATHWAY: vap01100
Entry
vap01100                    Pathway                                
Name
Metabolic pathways - Variovorax paradoxus S110
Class
Pathway map
vap01100  Metabolic pathways
vap01100

Module
vap_M00001  Glycolysis (Embden-Meyerhof pathway), glucose => pyruvate [PATH:vap01100]
vap_M00002  Glycolysis, core module involving three-carbon compounds [PATH:vap01100]
vap_M00003  Gluconeogenesis, oxaloacetate => fructose-6P [PATH:vap01100]
vap_M00004  Pentose phosphate pathway (Pentose phosphate cycle) [PATH:vap01100]
vap_M00005  PRPP biosynthesis, ribose 5P => PRPP [PATH:vap01100]
vap_M00006  Pentose phosphate pathway, oxidative phase, glucose 6P => ribulose 5P [PATH:vap01100]
vap_M00007  Pentose phosphate pathway, non-oxidative phase, fructose 6P => ribose 5P [PATH:vap01100]
vap_M00008  Entner-Doudoroff pathway, glucose-6P => glyceraldehyde-3P + pyruvate [PATH:vap01100]
vap_M00009  Citrate cycle (TCA cycle, Krebs cycle) [PATH:vap01100]
vap_M00010  Citrate cycle, first carbon oxidation, oxaloacetate => 2-oxoglutarate [PATH:vap01100]
vap_M00011  Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate [PATH:vap01100]
vap_M00012  Glyoxylate cycle [PATH:vap01100]
vap_M00015  Proline biosynthesis, glutamate => proline [PATH:vap01100]
vap_M00016  Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine [PATH:vap01100]
vap_M00018  Threonine biosynthesis, aspartate => homoserine => threonine [PATH:vap01100]
vap_M00019  Valine/isoleucine biosynthesis, pyruvate => valine / 2-oxobutanoate => isoleucine [PATH:vap01100]
vap_M00020  Serine biosynthesis, glycerate-3P => serine [PATH:vap01100]
vap_M00021  Cysteine biosynthesis, serine => cysteine [PATH:vap01100]
vap_M00022  Shikimate pathway, phosphoenolpyruvate + erythrose-4P => chorismate [PATH:vap01100]
vap_M00023  Tryptophan biosynthesis, chorismate => tryptophan [PATH:vap01100]
vap_M00024  Phenylalanine biosynthesis, chorismate => phenylpyruvate => phenylalanine [PATH:vap01100]
vap_M00025  Tyrosine biosynthesis, chorismate => HPP => tyrosine [PATH:vap01100]
vap_M00026  Histidine biosynthesis, PRPP => histidine [PATH:vap01100]
vap_M00028  Ornithine biosynthesis, glutamate => ornithine [PATH:vap01100]
vap_M00036  Leucine degradation, leucine => acetoacetate + acetyl-CoA [PATH:vap01100]
vap_M00044  Tyrosine degradation, tyrosine => homogentisate [PATH:vap01100]
vap_M00045  Histidine degradation, histidine => N-formiminoglutamate => glutamate [PATH:vap01100]
vap_M00048  De novo purine biosynthesis, PRPP + glutamine => IMP [PATH:vap01100]
vap_M00049  Adenine ribonucleotide biosynthesis, IMP => ADP,ATP [PATH:vap01100]
vap_M00050  Guanine ribonucleotide biosynthesis, IMP => GDP,GTP [PATH:vap01100]
vap_M00052  Pyrimidine ribonucleotide biosynthesis, UMP => UDP/UTP,CDP/CTP [PATH:vap01100]
vap_M00053  Deoxyribonucleotide biosynthesis, ADP/GDP/CDP/UDP => dATP/dGTP/dCTP/dUTP [PATH:vap01100]
vap_M00063  CMP-KDO biosynthesis [PATH:vap01100]
vap_M00082  Fatty acid biosynthesis, initiation [PATH:vap01100]
vap_M00083  Fatty acid biosynthesis, elongation [PATH:vap01100]
vap_M00086  beta-Oxidation, acyl-CoA synthesis [PATH:vap01100]
vap_M00087  beta-Oxidation [PATH:vap01100]
vap_M00093  Phosphatidylethanolamine (PE) biosynthesis, PA => PS => PE [PATH:vap01100]
vap_M00115  NAD biosynthesis, aspartate => quinolinate => NAD [PATH:vap01100]
vap_M00118  Glutathione biosynthesis, glutamate => glutathione [PATH:vap01100]
vap_M00119  Pantothenate biosynthesis, valine/L-aspartate => pantothenate [PATH:vap01100]
vap_M00120  Coenzyme A biosynthesis, pantothenate => CoA [PATH:vap01100]
vap_M00121  Heme biosynthesis, plants and bacteria, glutamate => heme [PATH:vap01100]
vap_M00122  Cobalamin biosynthesis, cobyrinate a,c-diamide => cobalamin [PATH:vap01100]
vap_M00123  Biotin biosynthesis, pimeloyl-ACP/CoA => biotin [PATH:vap01100]
vap_M00125  Riboflavin biosynthesis, plants and bacteria, GTP => riboflavin/FMN/FAD [PATH:vap01100]
vap_M00126  Tetrahydrofolate biosynthesis, GTP => THF [PATH:vap01100]
vap_M00144  NADH:quinone oxidoreductase, prokaryotes [PATH:vap01100]
vap_M00149  Succinate dehydrogenase, prokaryotes [PATH:vap01100]
vap_M00150  Fumarate reductase, prokaryotes [PATH:vap01100]
vap_M00151  Cytochrome bc1 complex respiratory unit [PATH:vap01100]
vap_M00155  Cytochrome c oxidase, prokaryotes [PATH:vap01100]
vap_M00156  Cytochrome c oxidase, cbb3-type [PATH:vap01100]
vap_M00157  F-type ATPase, prokaryotes and chloroplasts [PATH:vap01100]
vap_M00165  Reductive pentose phosphate cycle (Calvin cycle) [PATH:vap01100]
vap_M00168  CAM (Crassulacean acid metabolism), dark [PATH:vap01100]
vap_M00176  Assimilatory sulfate reduction, sulfate => H2S [PATH:vap01100]
vap_M00307  Pyruvate oxidation, pyruvate => acetyl-CoA [PATH:vap01100]
vap_M00417  Cytochrome o ubiquinol oxidase [PATH:vap01100]
vap_M00432  Leucine biosynthesis, 2-oxoisovalerate => 2-oxoisocaproate [PATH:vap01100]
vap_M00531  Assimilatory nitrate reduction, nitrate => ammonia [PATH:vap01100]
vap_M00533  Homoprotocatechuate degradation, homoprotocatechuate => 2-oxohept-3-enedioate [PATH:vap01100]
vap_M00549  Nucleotide sugar biosynthesis, glucose => UDP-glucose [PATH:vap01100]
vap_M00552  D-galactonate degradation, De Ley-Doudoroff pathway, D-galactonate => glycerate-3P [PATH:vap01100]
vap_M00565  Trehalose biosynthesis, D-glucose 1P => trehalose [PATH:vap01100]
vap_M00570  Isoleucine biosynthesis, threonine => 2-oxobutanoate => isoleucine [PATH:vap01100]
vap_M00579  Phosphate acetyltransferase-acetate kinase pathway, acetyl-CoA => acetate [PATH:vap01100]
vap_M00621  Glycine cleavage system [PATH:vap01100]
vap_M00793  dTDP-L-rhamnose biosynthesis [PATH:vap01100]
vap_M00844  Arginine biosynthesis, ornithine => arginine [PATH:vap01100]
vap_M00854  Glycogen biosynthesis, glucose-1P => glycogen/starch [PATH:vap01100]
vap_M00855  Glycogen degradation, glycogen => glucose-6P [PATH:vap01100]
vap_M00880  Molybdenum cofactor biosynthesis, GTP => molybdenum cofactor [PATH:vap01100]
vap_M00881  Lipoic acid biosynthesis, plants and bacteria, octanoyl-ACP => dihydrolipoyl-E2/H [PATH:vap01100]
vap_M00909  UDP-N-acetyl-D-glucosamine biosynthesis, prokaryotes, glucose => UDP-GlcNAc [PATH:vap01100]
vap_M00938  Pyrimidine deoxyribonucleotide biosynthesis, UDP => dTTP [PATH:vap01100]
vap_M00939  Pyrimidine degradation, uracil => 3-hydroxypropanoate [PATH:vap01100]
vap_M00958  Adenine ribonucleotide degradation, AMP => Urate [PATH:vap01100]
vap_M00959  Guanine ribonucleotide degradation, GMP => Urate [PATH:vap01100]
vap_M00970  Proline degradation, proline => glutamate [PATH:vap01100]
Organism
Variovorax paradoxus S110 [GN:vap]
Related
pathway
vap00010  Glycolysis / Gluconeogenesis
vap00020  Citrate cycle (TCA cycle)
vap00030  Pentose phosphate pathway
vap00040  Pentose and glucuronate interconversions
vap00051  Fructose and mannose metabolism
vap00052  Galactose metabolism
vap00053  Ascorbate and aldarate metabolism
vap00061  Fatty acid biosynthesis
vap00071  Fatty acid degradation
vap00100  Steroid biosynthesis
vap00130  Ubiquinone and other terpenoid-quinone biosynthesis
vap00190  Oxidative phosphorylation
vap00220  Arginine biosynthesis
vap00230  Purine metabolism
vap00240  Pyrimidine metabolism
vap00250  Alanine, aspartate and glutamate metabolism
vap00260  Glycine, serine and threonine metabolism
vap00261  Monobactam biosynthesis
vap00270  Cysteine and methionine metabolism
vap00280  Valine, leucine and isoleucine degradation
vap00290  Valine, leucine and isoleucine biosynthesis
vap00300  Lysine biosynthesis
vap00310  Lysine degradation
vap00311  Penicillin and cephalosporin biosynthesis
vap00330  Arginine and proline metabolism
vap00332  Carbapenem biosynthesis
vap00340  Histidine metabolism
vap00350  Tyrosine metabolism
vap00360  Phenylalanine metabolism
vap00361  Chlorocyclohexane and chlorobenzene degradation
vap00362  Benzoate degradation
vap00364  Fluorobenzoate degradation
vap00380  Tryptophan metabolism
vap00400  Phenylalanine, tyrosine and tryptophan biosynthesis
vap00401  Novobiocin biosynthesis
vap00405  Phenazine biosynthesis
vap00410  beta-Alanine metabolism
vap00430  Taurine and hypotaurine metabolism
vap00440  Phosphonate and phosphinate metabolism
vap00450  Selenocompound metabolism
vap00460  Cyanoamino acid metabolism
vap00470  D-Amino acid metabolism
vap00480  Glutathione metabolism
vap00500  Starch and sucrose metabolism
vap00520  Amino sugar and nucleotide sugar metabolism
vap00521  Streptomycin biosynthesis
vap00523  Polyketide sugar unit biosynthesis
vap00525  Acarbose and validamycin biosynthesis
vap00540  Lipopolysaccharide biosynthesis
vap00541  O-Antigen nucleotide sugar biosynthesis
vap00543  Exopolysaccharide biosynthesis
vap00550  Peptidoglycan biosynthesis
vap00552  Teichoic acid biosynthesis
vap00561  Glycerolipid metabolism
vap00562  Inositol phosphate metabolism
vap00564  Glycerophospholipid metabolism
vap00565  Ether lipid metabolism
vap00592  alpha-Linolenic acid metabolism
vap00620  Pyruvate metabolism
vap00621  Dioxin degradation
vap00622  Xylene degradation
vap00623  Toluene degradation
vap00624  Polycyclic aromatic hydrocarbon degradation
vap00625  Chloroalkane and chloroalkene degradation
vap00626  Naphthalene degradation
vap00627  Aminobenzoate degradation
vap00630  Glyoxylate and dicarboxylate metabolism
vap00633  Nitrotoluene degradation
vap00640  Propanoate metabolism
vap00642  Ethylbenzene degradation
vap00643  Styrene degradation
vap00650  Butanoate metabolism
vap00660  C5-Branched dibasic acid metabolism
vap00670  One carbon pool by folate
vap00680  Methane metabolism
vap00710  Carbon fixation in photosynthetic organisms
vap00730  Thiamine metabolism
vap00740  Riboflavin metabolism
vap00750  Vitamin B6 metabolism
vap00760  Nicotinate and nicotinamide metabolism
vap00770  Pantothenate and CoA biosynthesis
vap00780  Biotin metabolism
vap00785  Lipoic acid metabolism
vap00790  Folate biosynthesis
vap00791  Atrazine degradation
vap00860  Porphyrin metabolism
vap00900  Terpenoid backbone biosynthesis
vap00906  Carotenoid biosynthesis
vap00907  Pinene, camphor and geraniol degradation
vap00910  Nitrogen metabolism
vap00920  Sulfur metabolism
vap00930  Caprolactam degradation
vap00946  Degradation of flavonoids
vap00999  Biosynthesis of various plant secondary metabolites
vap01040  Biosynthesis of unsaturated fatty acids
KO pathway
ko01100   
LinkDB

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