PATHWAY: vex01100 Help Entry vex01100                    Pathway                                 Name Metabolic pathways - Vibrio antiquarius Class BRITE hierarchy Pathway map vex01100   Metabolic pathways Module vex_M00002   Glycolysis, core module involving three-carbon compounds [PATH:vex01100] vex_M00003   Gluconeogenesis, oxaloacetate => fructose-6P [PATH:vex01100] vex_M00004   Pentose phosphate pathway (Pentose phosphate cycle) [PATH:vex01100] vex_M00005   PRPP biosynthesis, ribose 5P => PRPP [PATH:vex01100] vex_M00006   Pentose phosphate pathway, oxidative phase, glucose 6P => ribulose 5P [PATH:vex01100] vex_M00007   Pentose phosphate pathway, non-oxidative phase, fructose 6P => ribose 5P [PATH:vex01100] vex_M00008   Entner-Doudoroff pathway, glucose-6P => glyceraldehyde-3P + pyruvate [PATH:vex01100] vex_M00009   Citrate cycle (TCA cycle, Krebs cycle) [PATH:vex01100] vex_M00010   Citrate cycle, first carbon oxidation, oxaloacetate => 2-oxoglutarate [PATH:vex01100] vex_M00011   Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate [PATH:vex01100] vex_M00012   Glyoxylate cycle [PATH:vex01100] vex_M00015   Proline biosynthesis, glutamate => proline [PATH:vex01100] vex_M00016   Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine [PATH:vex01100] vex_M00017   Methionine biosynthesis, aspartate => homoserine => methionine [PATH:vex01100] vex_M00018   Threonine biosynthesis, aspartate => homoserine => threonine [PATH:vex01100] vex_M00019   Valine/isoleucine biosynthesis, pyruvate => valine / 2-oxobutanoate => isoleucine [PATH:vex01100] vex_M00020   Serine biosynthesis, glycerate-3P => serine [PATH:vex01100] vex_M00021   Cysteine biosynthesis, serine => cysteine [PATH:vex01100] vex_M00022   Shikimate pathway, phosphoenolpyruvate + erythrose-4P => chorismate [PATH:vex01100] vex_M00023   Tryptophan biosynthesis, chorismate => tryptophan [PATH:vex01100] vex_M00024   Phenylalanine biosynthesis, chorismate => phenylpyruvate => phenylalanine [PATH:vex01100] vex_M00025   Tyrosine biosynthesis, chorismate => HPP => tyrosine [PATH:vex01100] vex_M00026   Histidine biosynthesis, PRPP => histidine [PATH:vex01100] vex_M00028   Ornithine biosynthesis, glutamate => ornithine [PATH:vex01100] vex_M00033   Ectoine biosynthesis, aspartate => ectoine [PATH:vex01100] vex_M00036   Leucine degradation, leucine => acetoacetate + acetyl-CoA [PATH:vex01100] vex_M00044   Tyrosine degradation, tyrosine => homogentisate [PATH:vex01100] vex_M00045   Histidine degradation, histidine => N-formiminoglutamate => glutamate [PATH:vex01100] vex_M00048   De novo purine biosynthesis, PRPP + glutamine => IMP [PATH:vex01100] vex_M00049   Adenine ribonucleotide biosynthesis, IMP => ADP,ATP [PATH:vex01100] vex_M00050   Guanine ribonucleotide biosynthesis, IMP => GDP,GTP [PATH:vex01100] vex_M00051   De novo pyrimidine biosynthesis, glutamine (+ PRPP) => UMP [PATH:vex01100] vex_M00052   Pyrimidine ribonucleotide biosynthesis, UMP => UDP/UTP,CDP/CTP [PATH:vex01100] vex_M00053   Deoxyribonucleotide biosynthesis, ADP/GDP/CDP/UDP => dATP/dGTP/dCTP/dUTP [PATH:vex01100] vex_M00060   KDO2-lipid A biosynthesis, Raetz pathway, LpxL-LpxM type [PATH:vex01100] vex_M00064   ADP-L-glycero-D-manno-heptose biosynthesis [PATH:vex01100] vex_M00082   Fatty acid biosynthesis, initiation [PATH:vex01100] vex_M00083   Fatty acid biosynthesis, elongation [PATH:vex01100] vex_M00086   beta-Oxidation, acyl-CoA synthesis [PATH:vex01100] vex_M00087   beta-Oxidation [PATH:vex01100] vex_M00093   Phosphatidylethanolamine (PE) biosynthesis, PA => PS => PE [PATH:vex01100] vex_M00096   C5 isoprenoid biosynthesis, non-mevalonate pathway [PATH:vex01100] vex_M00115   NAD biosynthesis, aspartate => quinolinate => NAD [PATH:vex01100] vex_M00116   Menaquinone biosynthesis, chorismate (+ polyprenyl-PP) => menaquinol [PATH:vex01100] vex_M00117   Ubiquinone biosynthesis, prokaryotes, chorismate (+ polyprenyl-PP) => ubiquinol [PATH:vex01100] vex_M00118   Glutathione biosynthesis, glutamate => glutathione [PATH:vex01100] vex_M00120   Coenzyme A biosynthesis, pantothenate => CoA [PATH:vex01100] vex_M00121   Heme biosynthesis, plants and bacteria, glutamate => heme [PATH:vex01100] vex_M00122   Cobalamin biosynthesis, cobyrinate a,c-diamide => cobalamin [PATH:vex01100] vex_M00123   Biotin biosynthesis, pimeloyl-ACP/CoA => biotin [PATH:vex01100] vex_M00124   Pyridoxal-P biosynthesis, erythrose-4P => pyridoxal-P [PATH:vex01100] vex_M00125   Riboflavin biosynthesis, plants and bacteria, GTP => riboflavin/FMN/FAD [PATH:vex01100] vex_M00126   Tetrahydrofolate biosynthesis, GTP => THF [PATH:vex01100] vex_M00127   Thiamine biosynthesis, prokaryotes, AIR (+ DXP/tyrosine) => TMP/TPP [PATH:vex01100] vex_M00140   C1-unit interconversion, prokaryotes [PATH:vex01100] vex_M00149   Succinate dehydrogenase, prokaryotes [PATH:vex01100] vex_M00150   Fumarate reductase, prokaryotes [PATH:vex01100] vex_M00151   Cytochrome bc1 complex respiratory unit [PATH:vex01100] vex_M00155   Cytochrome c oxidase, prokaryotes [PATH:vex01100] vex_M00156   Cytochrome c oxidase, cbb3-type [PATH:vex01100] vex_M00157   F-type ATPase, prokaryotes and chloroplasts [PATH:vex01100] vex_M00168   CAM (Crassulacean acid metabolism), dark [PATH:vex01100] vex_M00176   Assimilatory sulfate reduction, sulfate => H2S [PATH:vex01100] vex_M00307   Pyruvate oxidation, pyruvate => acetyl-CoA [PATH:vex01100] vex_M00364   C10-C20 isoprenoid biosynthesis, bacteria [PATH:vex01100] vex_M00417   Cytochrome o ubiquinol oxidase [PATH:vex01100] vex_M00432   Leucine biosynthesis, 2-oxoisovalerate => 2-oxoisocaproate [PATH:vex01100] vex_M00530   Dissimilatory nitrate reduction, nitrate => ammonia [PATH:vex01100] vex_M00554   Nucleotide sugar biosynthesis, galactose => UDP-galactose [PATH:vex01100] vex_M00555   Betaine biosynthesis, choline => betaine [PATH:vex01100] vex_M00570   Isoleucine biosynthesis, threonine => 2-oxobutanoate => isoleucine [PATH:vex01100] vex_M00579   Phosphate acetyltransferase-acetate kinase pathway, acetyl-CoA => acetate [PATH:vex01100] vex_M00621   Glycine cleavage system [PATH:vex01100] vex_M00632   Galactose degradation, Leloir pathway, galactose => alpha-D-glucose-1P [PATH:vex01100] vex_M00844   Arginine biosynthesis, ornithine => arginine [PATH:vex01100] vex_M00854   Glycogen biosynthesis, glucose-1P => glycogen/starch [PATH:vex01100] vex_M00855   Glycogen degradation, glycogen => glucose-6P [PATH:vex01100] vex_M00880   Molybdenum cofactor biosynthesis, GTP => molybdenum cofactor [PATH:vex01100] vex_M00881   Lipoic acid biosynthesis, plants and bacteria, octanoyl-ACP => dihydrolipoyl-E2/H [PATH:vex01100] vex_M00899   Thiamine salvage pathway, HMP/HET => TMP [PATH:vex01100] vex_M00919   Ectoine degradation, ectoine => aspartate [PATH:vex01100] vex_M00948   Hydroxyproline degradation, trans-4-hydroxy-L-proline => 2-oxoglutarate [PATH:vex01100] vex_M00970   Proline degradation, proline => glutamate [PATH:vex01100] Organism Vibrio antiquarius [GN:vex] Related pathway vex00010   Glycolysis / Gluconeogenesis vex00020   Citrate cycle (TCA cycle) vex00030   Pentose phosphate pathway vex00040   Pentose and glucuronate interconversions vex00051   Fructose and mannose metabolism vex00052   Galactose metabolism vex00053   Ascorbate and aldarate metabolism vex00061   Fatty acid biosynthesis vex00071   Fatty acid degradation vex00130   Ubiquinone and other terpenoid-quinone biosynthesis vex00190   Oxidative phosphorylation vex00220   Arginine biosynthesis vex00230   Purine metabolism vex00240   Pyrimidine metabolism vex00250   Alanine, aspartate and glutamate metabolism vex00260   Glycine, serine and threonine metabolism vex00261   Monobactam biosynthesis vex00270   Cysteine and methionine metabolism vex00280   Valine, leucine and isoleucine degradation vex00290   Valine, leucine and isoleucine biosynthesis vex00300   Lysine biosynthesis vex00310   Lysine degradation vex00330   Arginine and proline metabolism vex00332   Carbapenem biosynthesis vex00340   Histidine metabolism vex00350   Tyrosine metabolism vex00360   Phenylalanine metabolism vex00361   Chlorocyclohexane and chlorobenzene degradation vex00362   Benzoate degradation vex00364   Fluorobenzoate degradation vex00380   Tryptophan metabolism vex00400   Phenylalanine, tyrosine and tryptophan biosynthesis vex00401   Novobiocin biosynthesis vex00410   beta-Alanine metabolism vex00430   Taurine and hypotaurine metabolism vex00440   Phosphonate and phosphinate metabolism vex00450   Selenocompound metabolism vex00460   Cyanoamino acid metabolism vex00470   D-Amino acid metabolism vex00480   Glutathione metabolism vex00500   Starch and sucrose metabolism vex00511   Other glycan degradation vex00520   Amino sugar and nucleotide sugar metabolism vex00521   Streptomycin biosynthesis vex00523   Polyketide sugar unit biosynthesis vex00525   Acarbose and validamycin biosynthesis vex00540   Lipopolysaccharide biosynthesis vex00541   O-Antigen nucleotide sugar biosynthesis vex00542   O-Antigen repeat unit biosynthesis vex00543   Exopolysaccharide biosynthesis vex00550   Peptidoglycan biosynthesis vex00552   Teichoic acid biosynthesis vex00561   Glycerolipid metabolism vex00562   Inositol phosphate metabolism vex00564   Glycerophospholipid metabolism vex00565   Ether lipid metabolism vex00592   alpha-Linolenic acid metabolism vex00600   Sphingolipid metabolism vex00620   Pyruvate metabolism vex00623   Toluene degradation vex00625   Chloroalkane and chloroalkene degradation vex00626   Naphthalene degradation vex00627   Aminobenzoate degradation vex00630   Glyoxylate and dicarboxylate metabolism vex00633   Nitrotoluene degradation vex00640   Propanoate metabolism vex00643   Styrene degradation vex00650   Butanoate metabolism vex00660   C5-Branched dibasic acid metabolism vex00670   One carbon pool by folate vex00680   Methane metabolism vex00730   Thiamine metabolism vex00740   Riboflavin metabolism vex00750   Vitamin B6 metabolism vex00760   Nicotinate and nicotinamide metabolism vex00770   Pantothenate and CoA biosynthesis vex00780   Biotin metabolism vex00785   Lipoic acid metabolism vex00790   Folate biosynthesis vex00860   Porphyrin metabolism vex00900   Terpenoid backbone biosynthesis vex00907   Pinene, camphor and geraniol degradation vex00910   Nitrogen metabolism vex00920   Sulfur metabolism vex00930   Caprolactam degradation vex00999   Biosynthesis of various plant secondary metabolites vex01040   Biosynthesis of unsaturated fatty acids KO pathway ko01100     LinkDB All DBs

DBGET integrated database retrieval system