KEGG   PATHWAY: vhr01100
Entry
vhr01100                    Pathway                                
Name
Metabolic pathways - Vibrio harveyi
Class
Pathway map
vhr01100  Metabolic pathways
vhr01100

Module
vhr_M00002  Glycolysis, core module involving three-carbon compounds [PATH:vhr01100]
vhr_M00003  Gluconeogenesis, oxaloacetate => fructose-6P [PATH:vhr01100]
vhr_M00004  Pentose phosphate pathway (Pentose phosphate cycle) [PATH:vhr01100]
vhr_M00005  PRPP biosynthesis, ribose 5P => PRPP [PATH:vhr01100]
vhr_M00006  Pentose phosphate pathway, oxidative phase, glucose 6P => ribulose 5P [PATH:vhr01100]
vhr_M00007  Pentose phosphate pathway, non-oxidative phase, fructose 6P => ribose 5P [PATH:vhr01100]
vhr_M00008  Entner-Doudoroff pathway, glucose-6P => glyceraldehyde-3P + pyruvate [PATH:vhr01100]
vhr_M00009  Citrate cycle (TCA cycle, Krebs cycle) [PATH:vhr01100]
vhr_M00010  Citrate cycle, first carbon oxidation, oxaloacetate => 2-oxoglutarate [PATH:vhr01100]
vhr_M00011  Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate [PATH:vhr01100]
vhr_M00012  Glyoxylate cycle [PATH:vhr01100]
vhr_M00015  Proline biosynthesis, glutamate => proline [PATH:vhr01100]
vhr_M00016  Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine [PATH:vhr01100]
vhr_M00017  Methionine biosynthesis, aspartate => homoserine => methionine [PATH:vhr01100]
vhr_M00018  Threonine biosynthesis, aspartate => homoserine => threonine [PATH:vhr01100]
vhr_M00019  Valine/isoleucine biosynthesis, pyruvate => valine / 2-oxobutanoate => isoleucine [PATH:vhr01100]
vhr_M00020  Serine biosynthesis, glycerate-3P => serine [PATH:vhr01100]
vhr_M00021  Cysteine biosynthesis, serine => cysteine [PATH:vhr01100]
vhr_M00022  Shikimate pathway, phosphoenolpyruvate + erythrose-4P => chorismate [PATH:vhr01100]
vhr_M00023  Tryptophan biosynthesis, chorismate => tryptophan [PATH:vhr01100]
vhr_M00024  Phenylalanine biosynthesis, chorismate => phenylpyruvate => phenylalanine [PATH:vhr01100]
vhr_M00025  Tyrosine biosynthesis, chorismate => HPP => tyrosine [PATH:vhr01100]
vhr_M00026  Histidine biosynthesis, PRPP => histidine [PATH:vhr01100]
vhr_M00028  Ornithine biosynthesis, glutamate => ornithine [PATH:vhr01100]
vhr_M00033  Ectoine biosynthesis, aspartate => ectoine [PATH:vhr01100]
vhr_M00044  Tyrosine degradation, tyrosine => homogentisate [PATH:vhr01100]
vhr_M00045  Histidine degradation, histidine => N-formiminoglutamate => glutamate [PATH:vhr01100]
vhr_M00048  De novo purine biosynthesis, PRPP + glutamine => IMP [PATH:vhr01100]
vhr_M00049  Adenine ribonucleotide biosynthesis, IMP => ADP,ATP [PATH:vhr01100]
vhr_M00050  Guanine ribonucleotide biosynthesis, IMP => GDP,GTP [PATH:vhr01100]
vhr_M00051  De novo pyrimidine biosynthesis, glutamine (+ PRPP) => UMP [PATH:vhr01100]
vhr_M00052  Pyrimidine ribonucleotide biosynthesis, UMP => UDP/UTP,CDP/CTP [PATH:vhr01100]
vhr_M00053  Deoxyribonucleotide biosynthesis, ADP/GDP/CDP/UDP => dATP/dGTP/dCTP/dUTP [PATH:vhr01100]
vhr_M00060  KDO2-lipid A biosynthesis, Raetz pathway, LpxL-LpxM type [PATH:vhr01100]
vhr_M00061  D-Glucuronate degradation, D-glucuronate => pyruvate + D-glyceraldehyde 3P [PATH:vhr01100]
vhr_M00064  ADP-L-glycero-D-manno-heptose biosynthesis [PATH:vhr01100]
vhr_M00082  Fatty acid biosynthesis, initiation [PATH:vhr01100]
vhr_M00083  Fatty acid biosynthesis, elongation [PATH:vhr01100]
vhr_M00086  beta-Oxidation, acyl-CoA synthesis [PATH:vhr01100]
vhr_M00087  beta-Oxidation [PATH:vhr01100]
vhr_M00093  Phosphatidylethanolamine (PE) biosynthesis, PA => PS => PE [PATH:vhr01100]
vhr_M00096  C5 isoprenoid biosynthesis, non-mevalonate pathway [PATH:vhr01100]
vhr_M00115  NAD biosynthesis, aspartate => quinolinate => NAD [PATH:vhr01100]
vhr_M00116  Menaquinone biosynthesis, chorismate (+ polyprenyl-PP) => menaquinol [PATH:vhr01100]
vhr_M00117  Ubiquinone biosynthesis, prokaryotes, chorismate (+ polyprenyl-PP) => ubiquinol [PATH:vhr01100]
vhr_M00118  Glutathione biosynthesis, glutamate => glutathione [PATH:vhr01100]
vhr_M00120  Coenzyme A biosynthesis, pantothenate => CoA [PATH:vhr01100]
vhr_M00121  Heme biosynthesis, plants and bacteria, glutamate => heme [PATH:vhr01100]
vhr_M00122  Cobalamin biosynthesis, cobyrinate a,c-diamide => cobalamin [PATH:vhr01100]
vhr_M00123  Biotin biosynthesis, pimeloyl-ACP/CoA => biotin [PATH:vhr01100]
vhr_M00124  Pyridoxal-P biosynthesis, erythrose-4P => pyridoxal-P [PATH:vhr01100]
vhr_M00125  Riboflavin biosynthesis, plants and bacteria, GTP => riboflavin/FMN/FAD [PATH:vhr01100]
vhr_M00126  Tetrahydrofolate biosynthesis, GTP => THF [PATH:vhr01100]
vhr_M00127  Thiamine biosynthesis, prokaryotes, AIR (+ DXP/tyrosine) => TMP/TPP [PATH:vhr01100]
vhr_M00140  C1-unit interconversion, prokaryotes [PATH:vhr01100]
vhr_M00149  Succinate dehydrogenase, prokaryotes [PATH:vhr01100]
vhr_M00150  Fumarate reductase, prokaryotes [PATH:vhr01100]
vhr_M00151  Cytochrome bc1 complex respiratory unit [PATH:vhr01100]
vhr_M00155  Cytochrome c oxidase, prokaryotes [PATH:vhr01100]
vhr_M00156  Cytochrome c oxidase, cbb3-type [PATH:vhr01100]
vhr_M00157  F-type ATPase, prokaryotes and chloroplasts [PATH:vhr01100]
vhr_M00168  CAM (Crassulacean acid metabolism), dark [PATH:vhr01100]
vhr_M00176  Assimilatory sulfate reduction, sulfate => H2S [PATH:vhr01100]
vhr_M00307  Pyruvate oxidation, pyruvate => acetyl-CoA [PATH:vhr01100]
vhr_M00364  C10-C20 isoprenoid biosynthesis, bacteria [PATH:vhr01100]
vhr_M00417  Cytochrome o ubiquinol oxidase [PATH:vhr01100]
vhr_M00432  Leucine biosynthesis, 2-oxoisovalerate => 2-oxoisocaproate [PATH:vhr01100]
vhr_M00530  Dissimilatory nitrate reduction, nitrate => ammonia [PATH:vhr01100]
vhr_M00550  Ascorbate degradation, ascorbate => D-xylulose-5P [PATH:vhr01100]
vhr_M00554  Nucleotide sugar biosynthesis, galactose => UDP-galactose [PATH:vhr01100]
vhr_M00555  Betaine biosynthesis, choline => betaine [PATH:vhr01100]
vhr_M00570  Isoleucine biosynthesis, threonine => 2-oxobutanoate => isoleucine [PATH:vhr01100]
vhr_M00579  Phosphate acetyltransferase-acetate kinase pathway, acetyl-CoA => acetate [PATH:vhr01100]
vhr_M00621  Glycine cleavage system [PATH:vhr01100]
vhr_M00632  Galactose degradation, Leloir pathway, galactose => alpha-D-glucose-1P [PATH:vhr01100]
vhr_M00844  Arginine biosynthesis, ornithine => arginine [PATH:vhr01100]
vhr_M00854  Glycogen biosynthesis, glucose-1P => glycogen/starch [PATH:vhr01100]
vhr_M00855  Glycogen degradation, glycogen => glucose-6P [PATH:vhr01100]
vhr_M00880  Molybdenum cofactor biosynthesis, GTP => molybdenum cofactor [PATH:vhr01100]
vhr_M00881  Lipoic acid biosynthesis, plants and bacteria, octanoyl-ACP => dihydrolipoyl-E2/H [PATH:vhr01100]
vhr_M00899  Thiamine salvage pathway, HMP/HET => TMP [PATH:vhr01100]
vhr_M00948  Hydroxyproline degradation, trans-4-hydroxy-L-proline => 2-oxoglutarate [PATH:vhr01100]
vhr_M00970  Proline degradation, proline => glutamate [PATH:vhr01100]
Organism
Vibrio harveyi [GN:vhr]
Related
pathway
vhr00010  Glycolysis / Gluconeogenesis
vhr00020  Citrate cycle (TCA cycle)
vhr00030  Pentose phosphate pathway
vhr00040  Pentose and glucuronate interconversions
vhr00051  Fructose and mannose metabolism
vhr00052  Galactose metabolism
vhr00053  Ascorbate and aldarate metabolism
vhr00061  Fatty acid biosynthesis
vhr00071  Fatty acid degradation
vhr00121  Secondary bile acid biosynthesis
vhr00130  Ubiquinone and other terpenoid-quinone biosynthesis
vhr00190  Oxidative phosphorylation
vhr00220  Arginine biosynthesis
vhr00230  Purine metabolism
vhr00240  Pyrimidine metabolism
vhr00250  Alanine, aspartate and glutamate metabolism
vhr00260  Glycine, serine and threonine metabolism
vhr00261  Monobactam biosynthesis
vhr00270  Cysteine and methionine metabolism
vhr00280  Valine, leucine and isoleucine degradation
vhr00290  Valine, leucine and isoleucine biosynthesis
vhr00300  Lysine biosynthesis
vhr00310  Lysine degradation
vhr00330  Arginine and proline metabolism
vhr00332  Carbapenem biosynthesis
vhr00340  Histidine metabolism
vhr00350  Tyrosine metabolism
vhr00360  Phenylalanine metabolism
vhr00361  Chlorocyclohexane and chlorobenzene degradation
vhr00362  Benzoate degradation
vhr00364  Fluorobenzoate degradation
vhr00380  Tryptophan metabolism
vhr00400  Phenylalanine, tyrosine and tryptophan biosynthesis
vhr00401  Novobiocin biosynthesis
vhr00410  beta-Alanine metabolism
vhr00430  Taurine and hypotaurine metabolism
vhr00440  Phosphonate and phosphinate metabolism
vhr00450  Selenocompound metabolism
vhr00460  Cyanoamino acid metabolism
vhr00470  D-Amino acid metabolism
vhr00480  Glutathione metabolism
vhr00500  Starch and sucrose metabolism
vhr00511  Other glycan degradation
vhr00520  Amino sugar and nucleotide sugar metabolism
vhr00521  Streptomycin biosynthesis
vhr00523  Polyketide sugar unit biosynthesis
vhr00525  Acarbose and validamycin biosynthesis
vhr00540  Lipopolysaccharide biosynthesis
vhr00541  O-Antigen nucleotide sugar biosynthesis
vhr00543  Exopolysaccharide biosynthesis
vhr00550  Peptidoglycan biosynthesis
vhr00552  Teichoic acid biosynthesis
vhr00561  Glycerolipid metabolism
vhr00562  Inositol phosphate metabolism
vhr00564  Glycerophospholipid metabolism
vhr00592  alpha-Linolenic acid metabolism
vhr00600  Sphingolipid metabolism
vhr00620  Pyruvate metabolism
vhr00623  Toluene degradation
vhr00625  Chloroalkane and chloroalkene degradation
vhr00626  Naphthalene degradation
vhr00627  Aminobenzoate degradation
vhr00630  Glyoxylate and dicarboxylate metabolism
vhr00633  Nitrotoluene degradation
vhr00640  Propanoate metabolism
vhr00643  Styrene degradation
vhr00650  Butanoate metabolism
vhr00660  C5-Branched dibasic acid metabolism
vhr00670  One carbon pool by folate
vhr00680  Methane metabolism
vhr00710  Carbon fixation by Calvin cycle
vhr00720  Other carbon fixation pathways
vhr00730  Thiamine metabolism
vhr00740  Riboflavin metabolism
vhr00750  Vitamin B6 metabolism
vhr00760  Nicotinate and nicotinamide metabolism
vhr00770  Pantothenate and CoA biosynthesis
vhr00780  Biotin metabolism
vhr00785  Lipoic acid metabolism
vhr00790  Folate biosynthesis
vhr00860  Porphyrin metabolism
vhr00900  Terpenoid backbone biosynthesis
vhr00907  Pinene, camphor and geraniol degradation
vhr00910  Nitrogen metabolism
vhr00920  Sulfur metabolism
vhr00930  Caprolactam degradation
vhr00946  Degradation of flavonoids
vhr00999  Biosynthesis of various plant secondary metabolites
vhr01040  Biosynthesis of unsaturated fatty acids
vhr01053  Biosynthesis of siderophore group nonribosomal peptides
KO pathway
ko01100   
LinkDB

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