KEGG   PATHWAY: vlc00010
Entry
vlc00010                    Pathway                                
Name
Glycolysis / Gluconeogenesis - Vagococcus luciliae
Description
Glycolysis is the process of converting glucose into pyruvate and generating small amounts of ATP (energy) and NADH (reducing power). It is a central pathway that produces important precursor metabolites: six-carbon compounds of glucose-6P and fructose-6P and three-carbon compounds of glycerone-P, glyceraldehyde-3P, glycerate-3P, phosphoenolpyruvate, and pyruvate [MD:M00001]. Acetyl-CoA, another important precursor metabolite, is produced by oxidative decarboxylation of pyruvate [MD:M00307]. When the enzyme genes of this pathway are examined in completely sequenced genomes, the reaction steps of three-carbon compounds from glycerone-P to pyruvate form a conserved core module [MD:M00002], which is found in almost all organisms and which sometimes contains operon structures in bacterial genomes. Gluconeogenesis is a synthesis pathway of glucose from noncarbohydrate precursors. It is essentially a reversal of glycolysis with minor variations of alternative paths [MD:M00003].
Class
Metabolism; Carbohydrate metabolism
Pathway map
vlc00010  Glycolysis / Gluconeogenesis
vlc00010

Module
vlc_M00001  Glycolysis (Embden-Meyerhof pathway), glucose => pyruvate [PATH:vlc00010]
vlc_M00002  Glycolysis, core module involving three-carbon compounds [PATH:vlc00010]
vlc_M00307  Pyruvate oxidation, pyruvate => acetyl-CoA [PATH:vlc00010]
Other DBs
GO: 0006096 0006094
Organism
Vagococcus luciliae [GN:vlc]
Gene
G314FT_16750  glcK; Glucokinase [KO:K25026] [EC:2.7.1.2]
G314FT_15910  pgi; Glucose-6-phosphate isomerase [KO:K01810] [EC:5.3.1.9]
G314FT_17230  pfkA; ATP-dependent 6-phosphofructokinase [KO:K00850] [EC:2.7.1.11]
G314FT_00680  fbp; Fructose-1,6-bisphosphatase class 3 [KO:K04041] [EC:3.1.3.11]
G314FT_19410  fda; Fructose-bisphosphate aldolase class 1 [KO:K01623] [EC:4.1.2.13]
G314FT_12520  fba; Fructose-bisphosphate aldolase [KO:K01624] [EC:4.1.2.13]
G314FT_13070  tpiA; Triosephosphate isomerase [KO:K01803] [EC:5.3.1.1]
G314FT_13050  gap; Glyceraldehyde-3-phosphate dehydrogenase [KO:K00134] [EC:1.2.1.12]
G314FT_13060  pgk; Phosphoglycerate kinase [KO:K00927] [EC:2.7.2.3]
G314FT_05750  gpmA; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [KO:K01834] [EC:5.4.2.11]
G314FT_13080  gpmI; 2,3-bisphosphoglycerate-independent phosphoglycerate mutase [KO:K15633] [EC:5.4.2.12]
G314FT_13090  eno; Enolase [KO:K01689] [EC:4.2.1.11]
G314FT_17220  pyk; Pyruvate kinase [KO:K00873] [EC:2.7.1.40]
G314FT_18310  ppdK; Pyruvate, phosphate dikinase [KO:K01006] [EC:2.7.9.1]
G314FT_18810  pdhA_2; Pyruvate dehydrogenase E1 component subunit alpha [KO:K00161] [EC:1.2.4.1]
G314FT_09970  pdhA_1; Pyruvate dehydrogenase E1 component subunit alpha [KO:K00161] [EC:1.2.4.1]
G314FT_18800  pdhB_2; Pyruvate dehydrogenase E1 component subunit beta [KO:K00162] [EC:1.2.4.1]
G314FT_09980  pdhB_1; Pyruvate dehydrogenase E1 component subunit beta [KO:K00162] [EC:1.2.4.1]
G314FT_18790  pdhC_2; Dihydrolipoyllysine-residue acetyltransferase component of pyruvate dehydrogenase complex [KO:K00627] [EC:2.3.1.12]
G314FT_09990  pdhC_1; Dihydrolipoyllysine-residue acetyltransferase component of pyruvate dehydrogenase complex [KO:K00627] [EC:2.3.1.12]
G314FT_18830  pdhD_2; Dihydrolipoyl dehydrogenase [KO:K00382] [EC:1.8.1.4]
G314FT_10000  pdhD_1; Dihydrolipoyl dehydrogenase [KO:K00382] [EC:1.8.1.4]
G314FT_10450  Pyruvate:ferredoxin oxidoreductase [KO:K03737] [EC:1.2.7.1 1.2.7.-]
G314FT_04170  ldh; L-lactate dehydrogenase [KO:K00016] [EC:1.1.1.27]
G314FT_05300  L-2-hydroxyisocaproate dehydrogenase [KO:K00016] [EC:1.1.1.27]
G314FT_08110  adhE_4; Aldehyde-alcohol dehydrogenase [KO:K04072] [EC:1.2.1.10 1.1.1.1]
G314FT_09000  adhE_5; Aldehyde-alcohol dehydrogenase [KO:K04072] [EC:1.2.1.10 1.1.1.1]
G314FT_12510  aldA; Putative aldehyde dehydrogenase AldA [KO:K00128] [EC:1.2.1.3]
G314FT_11360  mro; Aldose 1-epimerase [KO:K01785] [EC:5.1.3.3]
G314FT_13760  pgcA; Phosphoglucomutase [KO:K01835] [EC:5.4.2.2]
G314FT_00290  bglH; Aryl-phospho-beta-D-glucosidase BglH [KO:K01223] [EC:3.2.1.86]
G314FT_11340  gmuD; 6-phospho-beta-glucosidase GmuD [KO:K01223] [EC:3.2.1.86]
Compound
C00022  Pyruvate
C00024  Acetyl-CoA
C00031  D-Glucose
C00033  Acetate
C00036  Oxaloacetate
C00068  Thiamin diphosphate
C00074  Phosphoenolpyruvate
C00084  Acetaldehyde
C00085  D-Fructose 6-phosphate
C00103  D-Glucose 1-phosphate
C00111  Glycerone phosphate
C00118  D-Glyceraldehyde 3-phosphate
C00186  (S)-Lactate
C00197  3-Phospho-D-glycerate
C00221  beta-D-Glucose
C00236  3-Phospho-D-glyceroyl phosphate
C00267  alpha-D-Glucose
C00354  D-Fructose 1,6-bisphosphate
C00469  Ethanol
C00631  2-Phospho-D-glycerate
C00668  alpha-D-Glucose 6-phosphate
C01159  2,3-Bisphospho-D-glycerate
C01172  beta-D-Glucose 6-phosphate
C01451  Salicin
C05125  2-(alpha-Hydroxyethyl)thiamine diphosphate
C06186  Arbutin
C06187  Arbutin 6-phosphate
C06188  Salicin 6-phosphate
C15972  Enzyme N6-(lipoyl)lysine
C15973  Enzyme N6-(dihydrolipoyl)lysine
C16255  [Dihydrolipoyllysine-residue acetyltransferase] S-acetyldihydrolipoyllysine
Reference
  Authors
Nishizuka Y (ed).
  Title
[Metabolic Maps] (In Japanese)
  Journal
Tokyo Kagaku Dojin (1980)
Reference
  Authors
Nishizuka Y, Seyama Y, Ikai A, Ishimura Y, Kawaguchi A (eds).
  Title
[Cellular Functions and Metabolic Maps] (In Japanese)
  Journal
Tokyo Kagaku Dojin (1997)
Reference
  Authors
Michal G.
  Title
Biochemical Pathways
  Journal
Wiley (1999)
Related
pathway
vlc00020  Citrate cycle (TCA cycle)
vlc00030  Pentose phosphate pathway
vlc00500  Starch and sucrose metabolism
vlc00620  Pyruvate metabolism
vlc00640  Propanoate metabolism
vlc00710  Carbon fixation by Calvin cycle
KO pathway
ko00010   
LinkDB

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