KEGG   PATHWAY: vlu00010
Entry
vlu00010                    Pathway                                
Name
Glycolysis / Gluconeogenesis - Vagococcus lutrae
Description
Glycolysis is the process of converting glucose into pyruvate and generating small amounts of ATP (energy) and NADH (reducing power). It is a central pathway that produces important precursor metabolites: six-carbon compounds of glucose-6P and fructose-6P and three-carbon compounds of glycerone-P, glyceraldehyde-3P, glycerate-3P, phosphoenolpyruvate, and pyruvate [MD:M00001]. Acetyl-CoA, another important precursor metabolite, is produced by oxidative decarboxylation of pyruvate [MD:M00307]. When the enzyme genes of this pathway are examined in completely sequenced genomes, the reaction steps of three-carbon compounds from glycerone-P to pyruvate form a conserved core module [MD:M00002], which is found in almost all organisms and which sometimes contains operon structures in bacterial genomes. Gluconeogenesis is a synthesis pathway of glucose from noncarbohydrate precursors. It is essentially a reversal of glycolysis with minor variations of alternative paths [MD:M00003].
Class
Metabolism; Carbohydrate metabolism
Pathway map
vlu00010  Glycolysis / Gluconeogenesis
vlu00010

Module
vlu_M00001  Glycolysis (Embden-Meyerhof pathway), glucose => pyruvate [PATH:vlu00010]
vlu_M00002  Glycolysis, core module involving three-carbon compounds [PATH:vlu00010]
vlu_M00307  Pyruvate oxidation, pyruvate => acetyl-CoA [PATH:vlu00010]
Other DBs
GO: 0006096 0006094
Organism
Vagococcus lutrae [GN:vlu]
Gene
M2919_08670  ROK family glucokinase [KO:K25026] [EC:2.7.1.2]
M2919_09265  glucose-6-phosphate isomerase [KO:K01810] [EC:5.3.1.9]
M2919_00900  pfkA; 6-phosphofructokinase [KO:K00850] [EC:2.7.1.11]
M2919_04125  fructose-1,6-bisphosphatase [KO:K04041] [EC:3.1.3.11]
M2919_05465  fructose-bisphosphate aldolase [KO:K01624] [EC:4.1.2.13]
M2919_02125  tpiA; triose-phosphate isomerase [KO:K01803] [EC:5.3.1.1]
M2919_02135  gap; type I glyceraldehyde-3-phosphate dehydrogenase [KO:K00134] [EC:1.2.1.12]
M2919_02130  phosphoglycerate kinase [KO:K00927] [EC:2.7.2.3]
M2919_02720  gpmA; 2,3-diphosphoglycerate-dependent phosphoglycerate mutase [KO:K01834] [EC:5.4.2.11]
M2919_02120  gpmI; 2,3-bisphosphoglycerate-independent phosphoglycerate mutase [KO:K15633] [EC:5.4.2.12]
M2919_02115  eno; phosphopyruvate hydratase [KO:K01689] [EC:4.2.1.11]
M2919_00905  pyk; pyruvate kinase [KO:K00873] [EC:2.7.1.40]
M2919_05075  ppdK; pyruvate, phosphate dikinase [KO:K01006] [EC:2.7.9.1]
M2919_00510  pdhA; pyruvate dehydrogenase (acetyl-transferring) E1 component subunit alpha [KO:K00161] [EC:1.2.4.1]
M2919_02980  pdhA; pyruvate dehydrogenase (acetyl-transferring) E1 component subunit alpha [KO:K00161] [EC:1.2.4.1]
M2919_00515  alpha-ketoacid dehydrogenase subunit beta [KO:K00162] [EC:1.2.4.1]
M2919_02975  alpha-ketoacid dehydrogenase subunit beta [KO:K00162] [EC:1.2.4.1]
M2919_00520  dihydrolipoyllysine-residue acetyltransferase [KO:K00627] [EC:2.3.1.12]
M2919_02970  2-oxo acid dehydrogenase subunit E2 [KO:K00627] [EC:2.3.1.12]
M2919_04630  2-oxo acid dehydrogenase subunit E2 [KO:K00627] [EC:2.3.1.12]
M2919_00525  lpdA; dihydrolipoyl dehydrogenase [KO:K00382] [EC:1.8.1.4]
M2919_02365  lpdA; dihydrolipoyl dehydrogenase [KO:K00382] [EC:1.8.1.4]
M2919_04645  lpdA; dihydrolipoyl dehydrogenase [KO:K00382] [EC:1.8.1.4]
M2919_02030  L-lactate dehydrogenase [KO:K00016] [EC:1.1.1.27]
M2919_04865  adhE; bifunctional acetaldehyde-CoA/alcohol dehydrogenase [KO:K04072] [EC:1.2.1.10 1.1.1.1]
M2919_04130  galactose mutarotase [KO:K01785] [EC:5.1.3.3]
M2919_09120  phospho-sugar mutase [KO:K01835] [EC:5.4.2.2]
M2919_02600  6-phospho-beta-glucosidase [KO:K01222] [EC:3.2.1.86]
M2919_00880  6-phospho-beta-glucosidase [KO:K01223] [EC:3.2.1.86]
M2919_03225  glycoside hydrolase family 1 protein [KO:K01223] [EC:3.2.1.86]
M2919_04680  glycoside hydrolase family 1 protein [KO:K01223] [EC:3.2.1.86]
M2919_05990  6-phospho-beta-glucosidase [KO:K01223] [EC:3.2.1.86]
M2919_07130  glycoside hydrolase family 1 protein [KO:K01223] [EC:3.2.1.86]
M2919_06240  PTS glucose transporter subunit IIA [KO:K02777] [EC:2.7.1.-]
M2919_01040  PTS transporter subunit EIIC [KO:K02791] [EC:2.7.1.199 2.7.1.208]
M2919_08585  PTS transporter subunit EIIC [KO:K02791] [EC:2.7.1.199 2.7.1.208]
Compound
C00022  Pyruvate
C00024  Acetyl-CoA
C00031  D-Glucose
C00033  Acetate
C00036  Oxaloacetate
C00068  Thiamin diphosphate
C00074  Phosphoenolpyruvate
C00084  Acetaldehyde
C00085  D-Fructose 6-phosphate
C00103  D-Glucose 1-phosphate
C00111  Glycerone phosphate
C00118  D-Glyceraldehyde 3-phosphate
C00186  (S)-Lactate
C00197  3-Phospho-D-glycerate
C00221  beta-D-Glucose
C00236  3-Phospho-D-glyceroyl phosphate
C00267  alpha-D-Glucose
C00354  D-Fructose 1,6-bisphosphate
C00469  Ethanol
C00631  2-Phospho-D-glycerate
C00668  alpha-D-Glucose 6-phosphate
C01159  2,3-Bisphospho-D-glycerate
C01172  beta-D-Glucose 6-phosphate
C01451  Salicin
C05125  2-(alpha-Hydroxyethyl)thiamine diphosphate
C06186  Arbutin
C06187  Arbutin 6-phosphate
C06188  Salicin 6-phosphate
C15972  Enzyme N6-(lipoyl)lysine
C15973  Enzyme N6-(dihydrolipoyl)lysine
C16255  [Dihydrolipoyllysine-residue acetyltransferase] S-acetyldihydrolipoyllysine
Reference
  Authors
Nishizuka Y (ed).
  Title
[Metabolic Maps] (In Japanese)
  Journal
Tokyo Kagaku Dojin (1980)
Reference
  Authors
Nishizuka Y, Seyama Y, Ikai A, Ishimura Y, Kawaguchi A (eds).
  Title
[Cellular Functions and Metabolic Maps] (In Japanese)
  Journal
Tokyo Kagaku Dojin (1997)
Reference
  Authors
Michal G.
  Title
Biochemical Pathways
  Journal
Wiley (1999)
Related
pathway
vlu00020  Citrate cycle (TCA cycle)
vlu00030  Pentose phosphate pathway
vlu00500  Starch and sucrose metabolism
vlu00620  Pyruvate metabolism
vlu00640  Propanoate metabolism
vlu00710  Carbon fixation by Calvin cycle
KO pathway
ko00010   
LinkDB

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