PATHWAY: vog01100 Help Entry vog01100                    Pathway                                 Name Metabolic pathways - Vogesella sp. XCS3 Class BRITE hierarchy Pathway map vog01100   Metabolic pathways Module vog_M00001   Glycolysis (Embden-Meyerhof pathway), glucose => pyruvate [PATH:vog01100] vog_M00002   Glycolysis, core module involving three-carbon compounds [PATH:vog01100] vog_M00003   Gluconeogenesis, oxaloacetate => fructose-6P [PATH:vog01100] vog_M00005   PRPP biosynthesis, ribose 5P => PRPP [PATH:vog01100] vog_M00007   Pentose phosphate pathway, non-oxidative phase, fructose 6P => ribose 5P [PATH:vog01100] vog_M00008   Entner-Doudoroff pathway, glucose-6P => glyceraldehyde-3P + pyruvate [PATH:vog01100] vog_M00009   Citrate cycle (TCA cycle, Krebs cycle) [PATH:vog01100] vog_M00010   Citrate cycle, first carbon oxidation, oxaloacetate => 2-oxoglutarate [PATH:vog01100] vog_M00011   Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate [PATH:vog01100] vog_M00012   Glyoxylate cycle [PATH:vog01100] vog_M00015   Proline biosynthesis, glutamate => proline [PATH:vog01100] vog_M00016   Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine [PATH:vog01100] vog_M00018   Threonine biosynthesis, aspartate => homoserine => threonine [PATH:vog01100] vog_M00019   Valine/isoleucine biosynthesis, pyruvate => valine / 2-oxobutanoate => isoleucine [PATH:vog01100] vog_M00020   Serine biosynthesis, glycerate-3P => serine [PATH:vog01100] vog_M00021   Cysteine biosynthesis, serine => cysteine [PATH:vog01100] vog_M00022   Shikimate pathway, phosphoenolpyruvate + erythrose-4P => chorismate [PATH:vog01100] vog_M00023   Tryptophan biosynthesis, chorismate => tryptophan [PATH:vog01100] vog_M00024   Phenylalanine biosynthesis, chorismate => phenylpyruvate => phenylalanine [PATH:vog01100] vog_M00025   Tyrosine biosynthesis, chorismate => HPP => tyrosine [PATH:vog01100] vog_M00045   Histidine degradation, histidine => N-formiminoglutamate => glutamate [PATH:vog01100] vog_M00048   De novo purine biosynthesis, PRPP + glutamine => IMP [PATH:vog01100] vog_M00049   Adenine ribonucleotide biosynthesis, IMP => ADP,ATP [PATH:vog01100] vog_M00050   Guanine ribonucleotide biosynthesis, IMP => GDP,GTP [PATH:vog01100] vog_M00051   De novo pyrimidine biosynthesis, glutamine (+ PRPP) => UMP [PATH:vog01100] vog_M00052   Pyrimidine ribonucleotide biosynthesis, UMP => UDP/UTP,CDP/CTP [PATH:vog01100] vog_M00053   Deoxyribonucleotide biosynthesis, ADP/GDP/CDP/UDP => dATP/dGTP/dCTP/dUTP [PATH:vog01100] vog_M00063   CMP-KDO biosynthesis [PATH:vog01100] vog_M00064   ADP-L-glycero-D-manno-heptose biosynthesis [PATH:vog01100] vog_M00082   Fatty acid biosynthesis, initiation [PATH:vog01100] vog_M00083   Fatty acid biosynthesis, elongation [PATH:vog01100] vog_M00086   beta-Oxidation, acyl-CoA synthesis [PATH:vog01100] vog_M00093   Phosphatidylethanolamine (PE) biosynthesis, PA => PS => PE [PATH:vog01100] vog_M00115   NAD biosynthesis, aspartate => quinolinate => NAD [PATH:vog01100] vog_M00117   Ubiquinone biosynthesis, prokaryotes, chorismate (+ polyprenyl-PP) => ubiquinol [PATH:vog01100] vog_M00118   Glutathione biosynthesis, glutamate => glutathione [PATH:vog01100] vog_M00120   Coenzyme A biosynthesis, pantothenate => CoA [PATH:vog01100] vog_M00121   Heme biosynthesis, plants and bacteria, glutamate => heme [PATH:vog01100] vog_M00122   Cobalamin biosynthesis, cobyrinate a,c-diamide => cobalamin [PATH:vog01100] vog_M00123   Biotin biosynthesis, pimeloyl-ACP/CoA => biotin [PATH:vog01100] vog_M00126   Tetrahydrofolate biosynthesis, GTP => THF [PATH:vog01100] vog_M00133   Polyamine biosynthesis, arginine => agmatine => putrescine => spermidine [PATH:vog01100] vog_M00144   NADH:quinone oxidoreductase, prokaryotes [PATH:vog01100] vog_M00149   Succinate dehydrogenase, prokaryotes [PATH:vog01100] vog_M00151   Cytochrome bc1 complex respiratory unit [PATH:vog01100] vog_M00156   Cytochrome c oxidase, cbb3-type [PATH:vog01100] vog_M00157   F-type ATPase, prokaryotes and chloroplasts [PATH:vog01100] vog_M00168   CAM (Crassulacean acid metabolism), dark [PATH:vog01100] vog_M00307   Pyruvate oxidation, pyruvate => acetyl-CoA [PATH:vog01100] vog_M00432   Leucine biosynthesis, 2-oxoisovalerate => 2-oxoisocaproate [PATH:vog01100] vog_M00531   Assimilatory nitrate reduction, nitrate => ammonia [PATH:vog01100] vog_M00549   Nucleotide sugar biosynthesis, glucose => UDP-glucose [PATH:vog01100] vog_M00570   Isoleucine biosynthesis, threonine => 2-oxobutanoate => isoleucine [PATH:vog01100] vog_M00572   Pimeloyl-ACP biosynthesis, BioC-BioH pathway, malonyl-ACP => pimeloyl-ACP [PATH:vog01100] vog_M00579   Phosphate acetyltransferase-acetate kinase pathway, acetyl-CoA => acetate [PATH:vog01100] vog_M00621   Glycine cleavage system [PATH:vog01100] vog_M00793   dTDP-L-rhamnose biosynthesis [PATH:vog01100] vog_M00844   Arginine biosynthesis, ornithine => arginine [PATH:vog01100] vog_M00846   Siroheme biosynthesis, glutamyl-tRNA => siroheme [PATH:vog01100] vog_M00879   Arginine succinyltransferase pathway, arginine => glutamate [PATH:vog01100] vog_M00880   Molybdenum cofactor biosynthesis, GTP => molybdenum cofactor [PATH:vog01100] vog_M00881   Lipoic acid biosynthesis, plants and bacteria, octanoyl-ACP => dihydrolipoyl-E2/H [PATH:vog01100] vog_M00909   UDP-N-acetyl-D-glucosamine biosynthesis, prokaryotes, glucose => UDP-GlcNAc [PATH:vog01100] vog_M00938   Pyrimidine deoxyribonucleotide biosynthesis, UDP => dTTP [PATH:vog01100] vog_M00970   Proline degradation, proline => glutamate [PATH:vog01100] Organism Vogesella sp. XCS3 [GN:vog] Related pathway vog00010   Glycolysis / Gluconeogenesis vog00020   Citrate cycle (TCA cycle) vog00030   Pentose phosphate pathway vog00040   Pentose and glucuronate interconversions vog00051   Fructose and mannose metabolism vog00052   Galactose metabolism vog00061   Fatty acid biosynthesis vog00071   Fatty acid degradation vog00130   Ubiquinone and other terpenoid-quinone biosynthesis vog00190   Oxidative phosphorylation vog00220   Arginine biosynthesis vog00230   Purine metabolism vog00240   Pyrimidine metabolism vog00250   Alanine, aspartate and glutamate metabolism vog00260   Glycine, serine and threonine metabolism vog00261   Monobactam biosynthesis vog00270   Cysteine and methionine metabolism vog00280   Valine, leucine and isoleucine degradation vog00290   Valine, leucine and isoleucine biosynthesis vog00300   Lysine biosynthesis vog00310   Lysine degradation vog00330   Arginine and proline metabolism vog00332   Carbapenem biosynthesis vog00340   Histidine metabolism vog00350   Tyrosine metabolism vog00360   Phenylalanine metabolism vog00361   Chlorocyclohexane and chlorobenzene degradation vog00362   Benzoate degradation vog00364   Fluorobenzoate degradation vog00380   Tryptophan metabolism vog00400   Phenylalanine, tyrosine and tryptophan biosynthesis vog00401   Novobiocin biosynthesis vog00410   beta-Alanine metabolism vog00430   Taurine and hypotaurine metabolism vog00440   Phosphonate and phosphinate metabolism vog00450   Selenocompound metabolism vog00460   Cyanoamino acid metabolism vog00470   D-Amino acid metabolism vog00480   Glutathione metabolism vog00500   Starch and sucrose metabolism vog00520   Amino sugar and nucleotide sugar metabolism vog00521   Streptomycin biosynthesis vog00523   Polyketide sugar unit biosynthesis vog00525   Acarbose and validamycin biosynthesis vog00540   Lipopolysaccharide biosynthesis vog00541   O-Antigen nucleotide sugar biosynthesis vog00543   Exopolysaccharide biosynthesis vog00550   Peptidoglycan biosynthesis vog00552   Teichoic acid biosynthesis vog00561   Glycerolipid metabolism vog00562   Inositol phosphate metabolism vog00564   Glycerophospholipid metabolism vog00565   Ether lipid metabolism vog00592   alpha-Linolenic acid metabolism vog00620   Pyruvate metabolism vog00623   Toluene degradation vog00625   Chloroalkane and chloroalkene degradation vog00626   Naphthalene degradation vog00630   Glyoxylate and dicarboxylate metabolism vog00633   Nitrotoluene degradation vog00640   Propanoate metabolism vog00643   Styrene degradation vog00650   Butanoate metabolism vog00660   C5-Branched dibasic acid metabolism vog00670   One carbon pool by folate vog00680   Methane metabolism vog00730   Thiamine metabolism vog00740   Riboflavin metabolism vog00750   Vitamin B6 metabolism vog00760   Nicotinate and nicotinamide metabolism vog00770   Pantothenate and CoA biosynthesis vog00780   Biotin metabolism vog00785   Lipoic acid metabolism vog00790   Folate biosynthesis vog00860   Porphyrin metabolism vog00900   Terpenoid backbone biosynthesis vog00906   Carotenoid biosynthesis vog00907   Pinene, camphor and geraniol degradation vog00910   Nitrogen metabolism vog00920   Sulfur metabolism vog00999   Biosynthesis of various plant secondary metabolites vog01040   Biosynthesis of unsaturated fatty acids vog01055   Biosynthesis of vancomycin group antibiotics KO pathway ko01100     LinkDB All DBs

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