KEGG   PATHWAY: xma03082
Entry
xma03082                    Pathway                                
Name
ATP-dependent chromatin remodeling - Xiphophorus maculatus (southern platyfish)
Class
Genetic Information Processing; Chromosome
Pathway map
xma03082  ATP-dependent chromatin remodeling
xma03082

Organism
Xiphophorus maculatus (southern platyfish) [GN:xma]
Gene
102218085  smarca5; SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 5 [KO:K11654] [EC:5.6.2.-]
102226435  baz1a; bromodomain adjacent to zinc finger domain protein 1A [KO:K11655]
102226829  baz1b; tyrosine-protein kinase BAZ1B isoform X1 [KO:K11658]
102222358  baz2a; bromodomain adjacent to zinc finger domain protein 2A [KO:K15224]
102236398  bromodomain adjacent to zinc finger domain protein 2B isoform X1 [KO:K26167]
102236591  bromodomain adjacent to zinc finger domain protein 2B-like isoform X1 [KO:K26167]
102226731  chrac1; chromatin accessibility complex protein 1 [KO:K11656]
102217293  pole3; DNA polymerase epsilon subunit 3 [KO:K02326] [EC:2.7.7.7]
102219005  rsf1; remodeling and spacing factor 1 isoform X2 [KO:K11657]
102234067  remodeling and spacing factor 1-like [KO:K11657]
102225616  bptf; nucleosome-remodeling factor subunit BPTF isoform X1 [KO:K11728]
102224277  histone-binding protein RBBP7 isoform X2 [KO:K10752]
102222886  rbbp4; histone-binding protein RBBP4 [KO:K10752]
102225886  c11h17orf49; chromatin complexes subunit BAP18 isoform X1 [KO:K23406]
102223871  cat eye syndrome critical region protein 2 isoform X1 [KO:K25830]
102221255  chd3; chromodomain-helicase-DNA-binding protein 3 isoform X1 [KO:K11642] [EC:5.6.2.-]
102227958  chromodomain-helicase-DNA-binding protein 4-like isoform X1 [KO:K11643] [EC:5.6.2.-]
102236567  chromodomain-helicase-DNA-binding protein 4 isoform X1 [KO:K11643] [EC:5.6.2.-]
102225350  probable histone deacetylase 1-B [KO:K06067] [EC:3.5.1.98]
102236362  probable histone deacetylase 1-B [KO:K06067] [EC:3.5.1.98]
102238316  hdac2; histone deacetylase 2 [KO:K06067] [EC:3.5.1.98]
102227553  mbd2; methyl-CpG-binding domain protein 2 [KO:K11590]
102224802  methyl-CpG-binding domain protein 3-like isoform X4 [KO:K11591]
102221456  methyl-CpG-binding domain protein 3-like isoform X2 [KO:K11591]
102221463  mta1; metastasis-associated protein MTA1 [KO:K11660]
102227999  mta3; metastasis-associated protein MTA3 isoform X1 [KO:K11660]
102235243  mta2; metastasis-associated protein MTA2 [KO:K11660]
102218595  transcriptional repressor p66 alpha-like isoform X5 [KO:K23194]
102221442  transcriptional repressor p66-alpha-like [KO:K23194]
102230242  gatad2b; transcriptional repressor p66-beta isoform X1 [KO:K23194]
111609214  phf11; PHD finger protein 11 isoform X1 [KO:K23310]
102225653  phf6; PHD finger protein 6 isoform X1 [KO:K23310]
102226456  cdk2ap1; cyclin-dependent kinase 2-associated protein 1 isoform X1 [KO:K26454]
102216781  cdk2ap2; cyclin-dependent kinase 2-associated protein 2 [KO:K26455]
102218640  probable global transcription activator SNF2L2 [KO:K11647] [EC:5.6.2.-]
102222158  transcription activator BRG1 isoform X1 [KO:K11647] [EC:5.6.2.-]
102238432  smarca4; transcription activator BRG1 isoform X1 [KO:K11647] [EC:5.6.2.-]
102236844  SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily B member 1 [KO:K11648]
102217819  SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily B member 1-like [KO:K11648]
102237168  smarcc2; SWI/SNF complex subunit SMARCC2 isoform X1 [KO:K11649]
102217562  SWI/SNF complex subunit SMARCC1-like [KO:K11649]
102224406  smarcc1; SWI/SNF complex subunit SMARCC1 isoform X1 [KO:K11649]
102228838  smarcd1; SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 1 [KO:K11650]
102222302  SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 2 [KO:K11650]
102223885  smarcd3; SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 3 isoform X1 [KO:K11650]
102223126  smarce1; SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily E member 1 isoform X1 [KO:K11651]
102226691  SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily E member 1-like isoform X1 [KO:K11651]
102218394  actin, cytoplasmic 2 [KO:K05692]
102222885  actb; actin, cytoplasmic 1 [KO:K05692]
102236272  actin, cytoplasmic 3-like [KO:K05692]
102233322  actl6a; actin-like protein 6A [KO:K11340]
102218970  bcl7b; B-cell CLL/lymphoma 7 protein family member B [KO:K25605]
102224935  bcl7a; B-cell CLL/lymphoma 7 protein family member A [KO:K25605]
102224042  ss18; protein SSXT isoform X1 [KO:K15623]
102217206  ss18l1; calcium-responsive transactivator isoform X1 [KO:K15623]
102219805  AT-rich interactive domain-containing protein 1A-like isoform X1 [KO:K11653]
102228829  AT-rich interactive domain-containing protein 1B-like isoform X1 [KO:K11653]
102236424  AT-rich interactive domain-containing protein 1A-like [KO:K11653]
102228573  AT-rich interactive domain-containing protein 1B isoform X1 [KO:K11653]
102227787  dpf1; zinc finger protein neuro-d4 isoform X1 [KO:K22198]
102235244  zinc finger protein DPF3-like isoform X1 [KO:K22198]
102238195  zinc finger protein DPF3-like [KO:K22198]
102228975  zinc finger protein ubi-d4-like isoform X5 [KO:K13196]
102224250  zinc finger protein ubi-d4 isoform X1 [KO:K13196]
102222234  arid2; AT-rich interactive domain-containing protein 2 isoform X1 [KO:K11765]
102217911  protein polybromo-1-like [KO:K11757]
102223457  protein polybromo-1 isoform X1 [KO:K11757]
102229986  brd7; bromodomain-containing protein 7 isoform X1 [KO:K11723]
102224675  phf10; PHD finger protein 10 [KO:K22197]
102230128  brd9; bromodomain-containing protein 9 [KO:K22184]
102235543  bicra; BRD4-interacting chromatin-remodeling complex-associated protein isoform X1 [KO:K25612]
102237318  bicral; BRD4-interacting chromatin-remodeling complex-associated protein-like [KO:K25613]
102233683  ino80; DNA helicase INO80 isoform X1 [KO:K11665] [EC:5.6.2.-]
102233517  ino80b; INO80 complex subunit B isoform X1 [KO:K11666]
102234021  ino80c; INO80 complex subunit C isoform X2 [KO:K11667]
102238373  ino80d; INO80 complex subunit D [KO:K11668]
102232090  ino80e; INO80 complex subunit E isoform X1 [KO:K11669]
102227675  tfpt; TCF3 fusion partner [KO:K11670]
102233150  nfrkb; nuclear factor related to kappa-B-binding protein isoform X4 [KO:K11671]
102222735  mcrs1; microspherule protein 1 [KO:K11674]
102219308  uchl5; ubiquitin carboxyl-terminal hydrolase isozyme L5 [KO:K05610] [EC:3.4.19.12]
102231677  ruvbl1; ruvB-like 1 [KO:K04499] [EC:5.6.2.4]
102224231  ruvbl2; ruvB-like 2 [KO:K11338] [EC:5.6.2.3]
102232607  actr5; actin-related protein 5 [KO:K11672]
102222685  actr8; actin-related protein 8 [KO:K11673]
102217167  transcriptional repressor protein YY1-like [KO:K09201]
102222790  transcriptional repressor protein YY1-like isoform X2 [KO:K09201]
102238222  srcap; helicase SRCAP [KO:K11661] [EC:5.6.2.-]
102235895  dmap1; DNA methyltransferase 1-associated protein 1 [KO:K11324]
102223514  yeats4; YEATS domain-containing protein 4 [KO:K11341]
102236391  vps72; vacuolar protein sorting-associated protein 72 homolog [KO:K11664]
102228452  histone H2AX [KO:K11251]
102222618  late histone H2A.2.2-like [KO:K11251]
102229281  histone H2A [KO:K11251]
102232238  histone H2A.V [KO:K11251]
102227983  histone H2A [KO:K11251]
102234569  histone H2A-like [KO:K11251]
102232380  histone H2A.Z [KO:K11251]
102231801  histone H2A-like [KO:K11251]
111608582  histone H2A [KO:K11251]
111608583  histone H2A [KO:K11251]
111608635  histone H2A [KO:K11251]
111610837  histone H2A-like [KO:K11251]
111610992  histone H2A-like [KO:K11251]
111610995  histone H2A-like [KO:K11251]
111610830  histone H2A-like [KO:K11251]
111610836  histone H2A-like [KO:K11251]
102237754  core histone macro-H2A.1 isoform X1 [KO:K11251]
111611798  histone H2A-like [KO:K11251]
111611820  histone H2A [KO:K11251]
111611821  histone H2A [KO:K11251]
102220494  actr6; actin-related protein 6 isoform X1 [KO:K11662]
102224208  znhit1; zinc finger HIT domain-containing protein 1 [KO:K11663]
102237745  ep400; E1A-binding protein p400 isoform X9 [KO:K11320] [EC:5.6.2.-]
102219105  trrap; transformation/transcription domain-associated protein [KO:K08874]
102231904  mortality factor 4-like protein 1 [KO:K11339]
102219152  mortality factor 4-like protein 1 [KO:K11339]
102223134  mrgbp; MRG/MORF4L-binding protein [KO:K11343]
102232365  brd8; bromodomain-containing protein 8 isoform X2 [KO:K11321]
102235167  bromodomain-containing protein 8-like isoform X1 [KO:K11321]
102232838  ing3; inhibitor of growth protein 3 [KO:K11319]
102225627  enhancer of polycomb homolog 1-like [KO:K11322]
102236478  enhancer of polycomb homolog 1-like isoform X1 [KO:K11322]
102237058  meaf6; chromatin modification-related protein MEAF6 isoform X1 [KO:K11344]
102225592  kat5; histone acetyltransferase KAT5 isoform X1 [KO:K11304] [EC:2.3.1.48]
Reference
PMID:31769422
  Authors
Hasan N, Ahuja N
  Title
The Emerging Roles of ATP-Dependent Chromatin Remodeling Complexes in Pancreatic Cancer.
  Journal
Cancers (Basel) 11:cancers11121859 (2019)
DOI:10.3390/cancers11121859
Reference
PMID:32001526
  Authors
He S, Wu Z, Tian Y, Yu Z, Yu J, Wang X, Li J, Liu B, Xu Y
  Title
Structure of nucleosome-bound human BAF complex.
  Journal
Science 367:875-881 (2020)
DOI:10.1126/science.aaz9761
Reference
PMID:33941852
  Authors
Wanior M, Kramer A, Knapp S, Joerger AC
  Title
Exploiting vulnerabilities of SWI/SNF chromatin remodelling complexes for cancer therapy.
  Journal
Oncogene 40:3637-3654 (2021)
DOI:10.1038/s41388-021-01781-x
Reference
PMID:20493981
  Authors
Burgio G, Onorati MC, Corona DF
  Title
Chromatin remodeling regulation by small molecules and metabolites.
  Journal
Biochim Biophys Acta 1799:671-80 (2010)
DOI:10.1016/j.bbagrm.2010.05.007
KO pathway
ko03082   
LinkDB

DBGET integrated database retrieval system