KEGG   PATHWAY: xnm00010
Entry
xnm00010                    Pathway                                
Name
Glycolysis / Gluconeogenesis - Xenorhabdus nematophila AN6/1
Description
Glycolysis is the process of converting glucose into pyruvate and generating small amounts of ATP (energy) and NADH (reducing power). It is a central pathway that produces important precursor metabolites: six-carbon compounds of glucose-6P and fructose-6P and three-carbon compounds of glycerone-P, glyceraldehyde-3P, glycerate-3P, phosphoenolpyruvate, and pyruvate [MD:M00001]. Acetyl-CoA, another important precursor metabolite, is produced by oxidative decarboxylation of pyruvate [MD:M00307]. When the enzyme genes of this pathway are examined in completely sequenced genomes, the reaction steps of three-carbon compounds from glycerone-P to pyruvate form a conserved core module [MD:M00002], which is found in almost all organisms and which sometimes contains operon structures in bacterial genomes. Gluconeogenesis is a synthesis pathway of glucose from noncarbohydrate precursors. It is essentially a reversal of glycolysis with minor variations of alternative paths [MD:M00003].
Class
Metabolism; Carbohydrate metabolism
Pathway map
xnm00010  Glycolysis / Gluconeogenesis
xnm00010

Module
xnm_M00001  Glycolysis (Embden-Meyerhof pathway), glucose => pyruvate [PATH:xnm00010]
xnm_M00002  Glycolysis, core module involving three-carbon compounds [PATH:xnm00010]
xnm_M00003  Gluconeogenesis, oxaloacetate => fructose-6P [PATH:xnm00010]
xnm_M00307  Pyruvate oxidation, pyruvate => acetyl-CoA [PATH:xnm00010]
Other DBs
GO: 0006096 0006094
Organism
Xenorhabdus nematophila AN6/1 [GN:xnm]
Gene
XNC2_3762  glk; glucokinase [KO:K00845] [EC:2.7.1.2]
XNC2_3795  pgi; glucosephosphate isomerase [KO:K01810] [EC:5.3.1.9]
XNC2_0101  pfkA; 6-phosphofructokinase I [KO:K00850] [EC:2.7.1.11]
XNC2_0471  fbp; fructose-bisphosphatase [KO:K03841] [EC:3.1.3.11]
XNC2_2585  fbaB; fructose-bisphosphate aldolase class I [KO:K11645] [EC:4.1.2.13]
XNC2_2907  fbaA; fructose-bisphosphate aldolase, class II [KO:K01624] [EC:4.1.2.13]
XNC2_0209  tpiA; triosephosphate isomerase [KO:K01803] [EC:5.3.1.1]
XNC2_2410  gapA; glyceraldehyde-3-phosphate dehydrogenase A [KO:K00134] [EC:1.2.1.12]
XNC2_2908  pgk; phosphoglycerate kinase [KO:K00927] [EC:2.7.2.3]
XNC2_1388  gpmA; phosphoglyceromutase 1 [KO:K01834] [EC:5.4.2.11]
XNC2_0677  ytjC; putative phosphoglyceromutase 2 [KO:K15634] [EC:5.4.2.11]
XNC2_0862  eno; enolase [KO:K01689] [EC:4.2.1.11]
XNC2_1814  pykF; pyruvate kinase I (formerly F), fructose-stimulated [KO:K00873] [EC:2.7.1.40]
XNC2_2100  pykA; pyruvate kinase II, glucose-stimulated [KO:K00873] [EC:2.7.1.40]
XNC2_1807  pps; phosphoenolpyruvate synthase [KO:K01007] [EC:2.7.9.2]
XNC2_1063  aceE; pyruvate dehydrogenase, decarboxylase subunit, thiamin-binding [KO:K00163] [EC:1.2.4.1]
XNC2_1064  aceF; pyruvate dehydrogenase, dihydrolipoyltransacetylase subunit [KO:K00627] [EC:2.3.1.12]
XNC2_1065  lpd; dihydrolipoamide dehydrogenase, FAD/NAD(P)-binding, component of the 2-oxoglutarate dehydrogenase and the pyruvate dehydrogenase complexes [KO:K00382] [EC:1.8.1.4]
XNC2_1987  adhC; alcohol dehydrogenase class III [KO:K00121] [EC:1.1.1.284 1.1.1.1]
XNC2_1468  yiaY; putative alcohol dehydrogenase with dehydroquinate synthase-like domain [KO:K13954] [EC:1.1.1.1]
XNC2_0859  aldB; aldehyde dehydrogenase B (lactaldehyde dehydrogenase) [KO:K00128] [EC:1.2.1.3]
XNC2_0051  acs; acetyl-CoA synthetase, has propionyl-CoA synthetase activity [KO:K01895] [EC:6.2.1.1]
XNC2_1349  pgm; phosphoglucomutase [KO:K01835] [EC:5.4.2.2]
XNC2_2411  conserved hypothetical protein [KO:K01792] [EC:5.1.3.15]
XNC2_4438  pck; phosphoenolpyruvate carboxykinase [KO:K01610] [EC:4.1.1.49]
XNC2_3095  crr; PTS family enzyme IIA component [KO:K02777] [EC:2.7.1.-]
Compound
C00022  Pyruvate
C00024  Acetyl-CoA
C00031  D-Glucose
C00033  Acetate
C00036  Oxaloacetate
C00068  Thiamin diphosphate
C00074  Phosphoenolpyruvate
C00084  Acetaldehyde
C00085  D-Fructose 6-phosphate
C00103  D-Glucose 1-phosphate
C00111  Glycerone phosphate
C00118  D-Glyceraldehyde 3-phosphate
C00186  (S)-Lactate
C00197  3-Phospho-D-glycerate
C00221  beta-D-Glucose
C00236  3-Phospho-D-glyceroyl phosphate
C00267  alpha-D-Glucose
C00354  D-Fructose 1,6-bisphosphate
C00469  Ethanol
C00631  2-Phospho-D-glycerate
C00668  alpha-D-Glucose 6-phosphate
C01159  2,3-Bisphospho-D-glycerate
C01172  beta-D-Glucose 6-phosphate
C01451  Salicin
C05125  2-(alpha-Hydroxyethyl)thiamine diphosphate
C06186  Arbutin
C06187  Arbutin 6-phosphate
C06188  Salicin 6-phosphate
C15972  Enzyme N6-(lipoyl)lysine
C15973  Enzyme N6-(dihydrolipoyl)lysine
C16255  [Dihydrolipoyllysine-residue acetyltransferase] S-acetyldihydrolipoyllysine
Reference
  Authors
Nishizuka Y (ed).
  Title
[Metabolic Maps] (In Japanese)
  Journal
Tokyo Kagaku Dojin (1980)
Reference
  Authors
Nishizuka Y, Seyama Y, Ikai A, Ishimura Y, Kawaguchi A (eds).
  Title
[Cellular Functions and Metabolic Maps] (In Japanese)
  Journal
Tokyo Kagaku Dojin (1997)
Reference
  Authors
Michal G.
  Title
Biochemical Pathways
  Journal
Wiley (1999)
Related
pathway
xnm00020  Citrate cycle (TCA cycle)
xnm00030  Pentose phosphate pathway
xnm00500  Starch and sucrose metabolism
xnm00620  Pyruvate metabolism
xnm00640  Propanoate metabolism
KO pathway
ko00010   
LinkDB

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