KEGG   PATHWAY: xph00630
Entry
xph00630                    Pathway                                
Name
Glyoxylate and dicarboxylate metabolism - Xanthomonas phaseoli
Class
Metabolism; Carbohydrate metabolism
Pathway map
xph00630  Glyoxylate and dicarboxylate metabolism
xph00630

Module
xph_M00012  Glyoxylate cycle [PATH:xph00630]
xph_M00621  Glycine cleavage system [PATH:xph00630]
Other DBs
GO: 0046487 0043648
Organism
Xanthomonas phaseoli [GN:xph]
Gene
XppCFBP6546_10610  aceA; isocitrate lyase [KO:K01637] [EC:4.1.3.1]
XppCFBP6546_13490  acs; acetate--CoA ligase [KO:K01895] [EC:6.2.1.1]
XppCFBP6546_10615  XppCFBP6546P_10615; malate synthase A [KO:K01638] [EC:2.3.3.9]
XppCFBP6546_06460  XppCFBP6546P_06460; malate dehydrogenase [KO:K00024] [EC:1.1.1.37]
XppCFBP6546_17275  XppCFBP6546P_17275; citrate synthase [KO:K01647] [EC:2.3.3.1]
XppCFBP6546_20190  acnA; aconitate hydratase AcnA [KO:K01681] [EC:4.2.1.3]
XppCFBP6546_20205  acnB; bifunctional aconitate hydratase 2/2-methylisocitrate dehydratase [KO:K01682] [EC:4.2.1.3 4.2.1.99]
XppCFBP6546_04680  XppCFBP6546P_04680; thiolase family protein [KO:K00626] [EC:2.3.1.9]
XppCFBP6546_10865  XppCFBP6546P_10865; acetyl-CoA C-acetyltransferase [KO:K00626] [EC:2.3.1.9]
XppCFBP6546_16750  phbB; acetoacetyl-CoA reductase [KO:K00023] [EC:1.1.1.36]
XppCFBP6546_01000  XppCFBP6546P_01000; beta-ketoacyl-ACP reductase [KO:K00023] [EC:1.1.1.36]
XppCFBP6546_14350  katB; catalase KatB [KO:K03781] [EC:1.11.1.6]
XppCFBP6546_14580  XppCFBP6546P_14580; catalase family peroxidase [KO:K03781] [EC:1.11.1.6]
XppCFBP6546_05470  XppCFBP6546P_05470; catalase [KO:K03781] [EC:1.11.1.6]
XppCFBP6546_22280  XppCFBP6546P_22280; D-glycerate dehydrogenase [KO:K00090] [EC:1.1.1.79 1.1.1.81 1.1.1.215]
XppCFBP6546_08880  XppCFBP6546P_08880; HAD hydrolase-like protein [KO:K01091] [EC:3.1.3.18]
XppCFBP6546_16230  gph; phosphoglycolate phosphatase [KO:K01091] [EC:3.1.3.18]
XppCFBP6546_17525  XppCFBP6546P_17525; HAD family hydrolase [KO:K01091] [EC:3.1.3.18]
XppCFBP6546_00715  XppCFBP6546P_00715; glutamine synthetase [KO:K01915] [EC:6.3.1.2]
XppCFBP6546_00725  XppCFBP6546P_00725; glutamine synthetase [KO:K01915] [EC:6.3.1.2]
XppCFBP6546_10910  glnA; type I glutamate--ammonia ligase [KO:K01915] [EC:6.3.1.2]
XppCFBP6546_07720  XppCFBP6546P_07720; serine hydroxymethyltransferase [KO:K00600] [EC:2.1.2.1]
XppCFBP6546_05455  gcvP; aminomethyl-transferring glycine dehydrogenase [KO:K00281] [EC:1.4.4.2]
XppCFBP6546_20460  gcvT; glycine cleavage system aminomethyltransferase GcvT [KO:K00605] [EC:2.1.2.10]
XppCFBP6546_03765  lpdA; dihydrolipoyl dehydrogenase [KO:K00382] [EC:1.8.1.4]
XppCFBP6546_16040  lpdA; dihydrolipoyl dehydrogenase [KO:K00382] [EC:1.8.1.4]
XppCFBP6546_20465  gcvH; glycine cleavage system protein GcvH [KO:K02437]
XppCFBP6546_11935  XppCFBP6546P_11935; glycerate kinase [KO:K00865] [EC:2.7.1.165]
XppCFBP6546_01910  XppCFBP6546P_01910; bifunctional 4-hydroxy-2-oxoglutarate aldolase/2-dehydro-3-deoxy-phosphogluconate aldolase [KO:K01625] [EC:4.1.2.14 4.1.3.42]
XppCFBP6546_10250  purU; formyltetrahydrofolate deformylase [KO:K01433] [EC:3.5.1.10]
XppCFBP6546_18480  hutG; N-formylglutamate deformylase [KO:K01458] [EC:3.5.1.68]
Compound
C00007  Oxygen
C00011  CO2
C00014  Ammonia
C00022  Pyruvate
C00024  Acetyl-CoA
C00025  L-Glutamate
C00026  2-Oxoglutarate
C00027  Hydrogen peroxide
C00033  Acetate
C00036  Oxaloacetate
C00037  Glycine
C00042  Succinate
C00048  Glyoxylate
C00058  Formate
C00064  L-Glutamine
C00065  L-Serine
C00091  Succinyl-CoA
C00100  Propanoyl-CoA
C00111  Glycerone phosphate
C00136  Butanoyl-CoA
C00149  (S)-Malate
C00158  Citrate
C00160  Glycolate
C00168  Hydroxypyruvate
C00197  3-Phospho-D-glycerate
C00209  Oxalate
C00258  D-Glycerate
C00266  Glycolaldehyde
C00311  Isocitrate
C00313  Oxalyl-CoA
C00332  Acetoacetyl-CoA
C00417  cis-Aconitate
C00552  meso-Tartaric acid
C00631  2-Phospho-D-glycerate
C00683  (S)-Methylmalonyl-CoA
C00798  Formyl-CoA
C00877  Crotonoyl-CoA
C00888  Pentanoyl-CoA
C00898  (R,R)-Tartaric acid
C00975  Dihydroxyfumarate
C00988  2-Phosphoglycolate
C01127  4-Hydroxy-2-oxoglutarate
C01146  2-Hydroxy-3-oxopropanoate
C01182  D-Ribulose 1,5-bisphosphate
C01213  (R)-Methylmalonyl-CoA
C01380  Ethylene glycol
C01732  Mesaconate
C01989  3-Ethylmalate
C01990  3-Oxalomalate
C02123  3-Propylmalate
C02405  Formyl phosphate
C03217  2-Hydroxy-3-oxoadipate
C03459  2-Hydroxy-3-oxosuccinate
C03548  trans-2,3-Epoxysuccinate
C03561  (R)-3-Hydroxybutanoyl-CoA
C03618  L-threo-3-Methylaspartate
C04348  L-Malyl-CoA
C06027  L-erythro-3-Methylmalyl-CoA
C06028  2-Methylfumaryl-CoA
C06049  N-Formylderivatives
C18026  (2S)-Ethylmalonyl-CoA
C18324  (2S)-Methylsuccinyl-CoA
C20238  (2R)-Ethylmalonyl-CoA
C22337  D-Ribulose 1-phosphate
Reference
PMID:10978349
  Authors
Njau RK, Herndon CA, Hawes JW.
  Title
Novel beta-hydroxyacid dehydrogenases in Escherichia coli and Haemophilus influenzae.
  Journal
J Biol Chem 275:38780-6 (2000)
DOI:10.1074/jbc.M007432200
Reference
PMID:18065535
  Authors
Zarzycki J, Schlichting A, Strychalsky N, Muller M, Alber BE, Fuchs G
  Title
Mesaconyl-coenzyme A hydratase, a new enzyme of two central carbon metabolic pathways in bacteria.
  Journal
J Bacteriol 190:1366-74 (2008)
DOI:10.1128/JB.01621-07
Reference
PMID:18819910
  Authors
Erb TJ, Retey J, Fuchs G, Alber BE
  Title
Ethylmalonyl-CoA mutase from Rhodobacter sphaeroides defines a new subclade of coenzyme B12-dependent acyl-CoA mutases.
  Journal
J Biol Chem 283:32283-93 (2008)
DOI:10.1074/jbc.M805527200
Reference
PMID:9596633
  Authors
Coschigano KT, Melo-Oliveira R, Lim J, Coruzzi GM
  Title
Arabidopsis gls mutants and distinct Fd-GOGAT genes. Implications for photorespiration and primary nitrogen assimilation.
  Journal
Plant Cell 10:741-52 (1998)
DOI:10.1105/tpc.10.5.741
Reference
PMID:16407450
  Authors
Masclaux-Daubresse C, Reisdorf-Cren M, Pageau K, Lelandais M, Grandjean O, Kronenberger J, Valadier MH, Feraud M, Jouglet T, Suzuki A
  Title
Glutamine synthetase-glutamate synthase pathway and glutamate dehydrogenase play distinct roles in the sink-source nitrogen cycle in tobacco.
  Journal
Plant Physiol 140:444-56 (2006)
DOI:10.1104/pp.105.071910
Reference
PMID:21252347
  Authors
Khomyakova M, Bukmez O, Thomas LK, Erb TJ, Berg IA
  Title
A methylaspartate cycle in haloarchaea.
  Journal
Science 331:334-7 (2011)
DOI:10.1126/science.1196544
Reference
PMID:11513957
  Authors
Serrano JA, Bonete MJ
  Title
Sequencing, phylogenetic and transcriptional analysis of the glyoxylate bypass operon (ace) in the halophilic archaeon Haloferax volcanii.
  Journal
Biochim Biophys Acta 1520:154-62 (2001)
DOI:10.1016/S0167-4781(01)00263-9
Related
pathway
xph00010  Glycolysis / Gluconeogenesis
xph00020  Citrate cycle (TCA cycle)
xph00030  Pentose phosphate pathway
xph00053  Ascorbate and aldarate metabolism
xph00071  Fatty acid degradation
xph00230  Purine metabolism
xph00250  Alanine, aspartate and glutamate metabolism
xph00260  Glycine, serine and threonine metabolism
xph00620  Pyruvate metabolism
xph00710  Carbon fixation by Calvin cycle
xph00750  Vitamin B6 metabolism
xph00910  Nitrogen metabolism
KO pathway
ko00630   
LinkDB

DBGET integrated database retrieval system