KEGG   PATHWAY: xpr00230
Entry
xpr00230                    Pathway                                
Name
Purine metabolism - Xanthomonas prunicola
Class
Metabolism; Nucleotide metabolism
Pathway map
xpr00230  Purine metabolism
xpr00230

Module
xpr_M00005  PRPP biosynthesis, ribose 5P => PRPP [PATH:xpr00230]
xpr_M00048  De novo purine biosynthesis, PRPP + glutamine => IMP [PATH:xpr00230]
xpr_M00049  Adenine ribonucleotide biosynthesis, IMP => ADP,ATP [PATH:xpr00230]
xpr_M00050  Guanine ribonucleotide biosynthesis, IMP => GDP,GTP [PATH:xpr00230]
xpr_M00053  Deoxyribonucleotide biosynthesis, ADP/GDP/CDP/UDP => dATP/dGTP/dCTP/dUTP [PATH:xpr00230]
xpr_M00958  Adenine ribonucleotide degradation, AMP => Urate [PATH:xpr00230]
Other DBs
GO: 0006163 0042278
Organism
Xanthomonas prunicola [GN:xpr]
Gene
MUG10_05510  NUDIX hydrolase [KO:K01515] [EC:3.6.1.13 3.6.1.-]
MUG10_16525  nudE; ADP compounds hydrolase NudE [KO:K08312] [EC:3.6.1.-]
MUG10_12415  phosphomannomutase/phosphoglucomutase [KO:K15778] [EC:5.4.2.8 5.4.2.2]
MUG10_14025  phosphomannomutase [KO:K15778] [EC:5.4.2.8 5.4.2.2]
MUG10_05325  ribose-phosphate diphosphokinase [KO:K00948] [EC:2.7.6.1]
MUG10_04905  purF; amidophosphoribosyltransferase [KO:K00764] [EC:2.4.2.14]
MUG10_07720  purD; phosphoribosylamine--glycine ligase [KO:K01945] [EC:6.3.4.13]
MUG10_17055  purN; phosphoribosylglycinamide formyltransferase [KO:K11175] [EC:2.1.2.2]
MUG10_06470  purL; phosphoribosylformylglycinamidine synthase [KO:K01952] [EC:6.3.5.3]
MUG10_17065  purM; phosphoribosylformylglycinamidine cyclo-ligase [KO:K01933] [EC:6.3.3.1]
MUG10_18500  5-(carboxyamino)imidazole ribonucleotide synthase [KO:K01589] [EC:6.3.4.18]
MUG10_18495  purE; 5-(carboxyamino)imidazole ribonucleotide mutase [KO:K01588] [EC:5.4.99.18]
MUG10_07920  phosphoribosylaminoimidazolesuccinocarboxamide synthase [KO:K01923] [EC:6.3.2.6]
MUG10_01725  purB; adenylosuccinate lyase [KO:K01756] [EC:4.3.2.2]
MUG10_07715  purH; bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase [KO:K00602] [EC:2.1.2.3 3.5.4.10]
MUG10_19615  adenine phosphoribosyltransferase [KO:K00759] [EC:2.4.2.7]
MUG10_01430  5'-nucleotidase [KO:K01081] [EC:3.1.3.5]
MUG10_00355  surE; 5'/3'-nucleotidase SurE [KO:K03787] [EC:3.1.3.5 3.1.3.6]
MUG10_15745  pgeF; peptidoglycan editing factor PgeF [KO:K05810] [EC:2.4.2.1 2.4.2.28 3.5.4.4]
MUG10_03075  hypoxanthine-guanine phosphoribosyltransferase [KO:K00760] [EC:2.4.2.8]
MUG10_20135  guaB; IMP dehydrogenase [KO:K00088] [EC:1.1.1.205]
MUG10_21845  ndk; nucleoside-diphosphate kinase [KO:K00940] [EC:2.7.4.6]
MUG10_14985  rdgB; RdgB/HAM1 family non-canonical purine NTP pyrophosphatase [KO:K01519] [EC:3.6.1.66]
MUG10_17420  xanthine dehydrogenase family protein molybdopterin-binding subunit [KO:K11177] [EC:1.17.1.4]
MUG10_03920  xanthine dehydrogenase family protein molybdopterin-binding subunit [KO:K11177] [EC:1.17.1.4]
MUG10_03915  xanthine dehydrogenase family protein subunit M [KO:K11178] [EC:1.17.1.4]
MUG10_17410  paoA; aldehyde dehydrogenase iron-sulfur subunit [KO:K13483]
MUG10_03910  2Fe-2S iron-sulfur cluster-binding protein [KO:K13483]
MUG10_11170  glutamine amidotransferase [KO:K01951] [EC:6.3.5.2]
MUG10_20140  guaA; glutamine-hydrolyzing GMP synthase [KO:K01951] [EC:6.3.5.2]
MUG10_15005  gmk; guanylate kinase [KO:K00942] [EC:2.7.4.8]
MUG10_11755  ribonucleoside-diphosphate reductase subunit alpha [KO:K00525] [EC:1.17.4.1]
MUG10_11760  ribonucleotide-diphosphate reductase subunit beta [KO:K00526] [EC:1.17.4.1]
MUG10_16295  bifunctional (p)ppGpp synthetase/guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase [KO:K00951] [EC:2.7.6.5]
MUG10_03100  CYTH domain-containing protein [KO:K01768] [EC:4.6.1.1]
MUG10_04075  adenylosuccinate synthase [KO:K01939] [EC:6.3.4.4]
MUG10_06885  carbohydrate kinase family protein [KO:K00856] [EC:2.7.1.20]
MUG10_08755  adenosine deaminase [KO:K01488] [EC:3.5.4.4]
MUG10_18530  ppnN; nucleotide 5'-monophosphate nucleosidase PpnN [KO:K06966] [EC:3.2.2.10 3.2.2.-]
MUG10_14790  adenylate kinase [KO:K00939] [EC:2.7.4.3]
MUG10_16535  mazG; nucleoside triphosphate pyrophosphohydrolase [KO:K04765] [EC:3.6.1.9]
MUG10_05765  symmetrical bis(5'-nucleosyl)-tetraphosphatase [KO:K01525] [EC:3.6.1.41]
MUG10_15440  cysN; sulfate adenylyltransferase subunit CysN [KO:K00955] [EC:2.7.7.4 2.7.1.25]
MUG10_15435  cysD; sulfate adenylyltransferase subunit CysD [KO:K00957] [EC:2.7.7.4]
MUG10_08830  hpyO; FAD-dependent urate hydroxylase HpyO [KO:K22879] [EC:1.14.13.113]
MUG10_08835  uraH; hydroxyisourate hydrolase [KO:K07127] [EC:3.5.2.17]
MUG10_08825  uraD; 2-oxo-4-hydroxy-4-carboxy-5-ureidoimidazoline decarboxylase [KO:K13485] [EC:4.1.1.97]
MUG10_08815  puuE; allantoinase PuuE [KO:K16842] [EC:3.5.2.5]
MUG10_08805  allantoate amidohydrolase [KO:K02083] [EC:3.5.3.9]
MUG10_08810  alanine--glyoxylate aminotransferase family protein [KO:K00839] [EC:2.6.1.112]
MUG10_08775  gamma-glutamyltransferase family protein [KO:K22602] [EC:3.5.1.126]
Compound
C00002  ATP
C00008  ADP
C00011  CO2
C00014  Ammonia
C00020  AMP
C00035  GDP
C00037  Glycine
C00039  DNA
C00044  GTP
C00046  RNA
C00048  Glyoxylate
C00053  3'-Phosphoadenylyl sulfate
C00054  Adenosine 3',5'-bisphosphate
C00059  Sulfate
C00064  L-Glutamine
C00081  ITP
C00086  Urea
C00104  IDP
C00117  D-Ribose 5-phosphate
C00119  5-Phospho-alpha-D-ribose 1-diphosphate
C00130  IMP
C00131  dATP
C00144  GMP
C00147  Adenine
C00169  Carbamoyl phosphate
C00206  dADP
C00209  Oxalate
C00212  Adenosine
C00224  Adenylyl sulfate
C00242  Guanine
C00262  Hypoxanthine
C00286  dGTP
C00288  HCO3-
C00294  Inosine
C00301  ADP-ribose
C00330  Deoxyguanosine
C00360  dAMP
C00361  dGDP
C00362  dGMP
C00366  Urate
C00385  Xanthine
C00387  Guanosine
C00499  Allantoate
C00559  Deoxyadenosine
C00575  3',5'-Cyclic AMP
C00603  (S)-Ureidoglycolate
C00620  alpha-D-Ribose 1-phosphate
C00655  Xanthosine 5'-phosphate
C00700  XTP
C00802  Oxalureate
C00942  3',5'-Cyclic GMP
C01228  Guanosine 3',5'-bis(diphosphate)
C01260  P1,P4-Bis(5'-adenosyl)tetraphosphate
C01261  P1,P4-Bis(5'-guanosyl) tetraphosphate
C01344  dIDP
C01345  dITP
C01367  3'-AMP
C01444  Oxamate
C01762  Xanthosine
C02091  (S)-Ureidoglycine
C02348  (R)(-)-Allantoin
C02350  (S)-Allantoin
C02353  2',3'-Cyclic AMP
C02718  N-Formiminoglycine
C03090  5-Phosphoribosylamine
C03373  Aminoimidazole ribotide
C03483  Adenosine tetraphosphate
C03614  Inosine 5'-tetraphosphate
C03794  N6-(1,2-Dicarboxyethyl)-AMP
C03838  5'-Phosphoribosylglycinamide
C04051  5-Amino-4-imidazolecarboxyamide
C04376  5'-Phosphoribosyl-N-formylglycinamide
C04392  P1,P4-Bis(5'-xanthosyl) tetraphosphate
C04494  Guanosine 3'-diphosphate 5'-triphosphate
C04640  2-(Formamido)-N1-(5'-phosphoribosyl)acetamidine
C04677  1-(5'-Phosphoribosyl)-5-amino-4-imidazolecarboxamide
C04734  1-(5'-Phosphoribosyl)-5-formamido-4-imidazolecarboxamide
C04751  1-(5-Phospho-D-ribosyl)-5-amino-4-imidazolecarboxylate
C04823  1-(5'-Phosphoribosyl)-5-amino-4-(N-succinocarboxamide)-imidazole
C05239  5-Aminoimidazole
C05512  Deoxyinosine
C05513  Urate-3-ribonucleoside
C05515  5-Ureido-4-imidazole carboxylate
C05516  5-Amino-4-imidazole carboxylate
C05993  Acetyl adenylate
C06193  Guanosine 3'-phosphate
C06194  2',3'-Cyclic GMP
C06195  Imidazolone
C06196  2'-Deoxyinosine 5'-phosphate
C06197  P1,P3-Bis(5'-adenosyl) triphosphate
C06433  5'-Benzoylphosphoadenosine
C06435  5'-Butyrylphosphoinosine
C11821  5-Hydroxyisourate
C12248  5-Hydroxy-2-oxo-4-ureido-2,5-dihydro-1H-imidazole-5-carboxylate
C15667  5-Carboxyamino-1-(5-phospho-D-ribosyl)imidazole
C22395  N6-Succino-2-amino-2'-deoxyadenylate
C22441  dZMP
C22442  dZDP
C22443  dZTP
C22499  8-Hydroxyadenine
C22500  2,8-Dihydroxyadenine
Reference
PMID:10601204
  Authors
Cusa E, Obradors N, Baldoma L, Badia J, Aguilar J.
  Title
Genetic analysis of a chromosomal region containing genes required for assimilation of allantoin nitrogen and linked glyoxylate metabolism in Escherichia coli.
  Journal
J Bacteriol 181:7479-84 (1999)
DOI:10.1128/JB.181.24.7479-7484.1999
Reference
PMID:10986234
  Authors
Xi H, Schneider BL, Reitzer L.
  Title
Purine catabolism in Escherichia coli and function of xanthine dehydrogenase in purine salvage.
  Journal
J Bacteriol 182:5332-41 (2000)
DOI:10.1128/JB.182.19.5332-5341.2000
Related
pathway
xpr00030  Pentose phosphate pathway
xpr00220  Arginine biosynthesis
xpr00250  Alanine, aspartate and glutamate metabolism
xpr00260  Glycine, serine and threonine metabolism
xpr00340  Histidine metabolism
xpr00630  Glyoxylate and dicarboxylate metabolism
xpr00730  Thiamine metabolism
xpr00740  Riboflavin metabolism
xpr00790  Folate biosynthesis
KO pathway
ko00230   
LinkDB

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