KEGG   PATHWAY: ypa01100
Entry
ypa01100                    Pathway                                
Name
Metabolic pathways - Yersinia pestis Antiqua (biovar Antiqua)
Class
Pathway map
ypa01100  Metabolic pathways
ypa01100

Module
ypa_M00001  Glycolysis (Embden-Meyerhof pathway), glucose => pyruvate [PATH:ypa01100]
ypa_M00002  Glycolysis, core module involving three-carbon compounds [PATH:ypa01100]
ypa_M00003  Gluconeogenesis, oxaloacetate => fructose-6P [PATH:ypa01100]
ypa_M00004  Pentose phosphate pathway (Pentose phosphate cycle) [PATH:ypa01100]
ypa_M00005  PRPP biosynthesis, ribose 5P => PRPP [PATH:ypa01100]
ypa_M00006  Pentose phosphate pathway, oxidative phase, glucose 6P => ribulose 5P [PATH:ypa01100]
ypa_M00007  Pentose phosphate pathway, non-oxidative phase, fructose 6P => ribose 5P [PATH:ypa01100]
ypa_M00008  Entner-Doudoroff pathway, glucose-6P => glyceraldehyde-3P + pyruvate [PATH:ypa01100]
ypa_M00009  Citrate cycle (TCA cycle, Krebs cycle) [PATH:ypa01100]
ypa_M00010  Citrate cycle, first carbon oxidation, oxaloacetate => 2-oxoglutarate [PATH:ypa01100]
ypa_M00011  Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate [PATH:ypa01100]
ypa_M00012  Glyoxylate cycle [PATH:ypa01100]
ypa_M00015  Proline biosynthesis, glutamate => proline [PATH:ypa01100]
ypa_M00016  Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine [PATH:ypa01100]
ypa_M00017  Methionine biosynthesis, aspartate => homoserine => methionine [PATH:ypa01100]
ypa_M00018  Threonine biosynthesis, aspartate => homoserine => threonine [PATH:ypa01100]
ypa_M00019  Valine/isoleucine biosynthesis, pyruvate => valine / 2-oxobutanoate => isoleucine [PATH:ypa01100]
ypa_M00020  Serine biosynthesis, glycerate-3P => serine [PATH:ypa01100]
ypa_M00021  Cysteine biosynthesis, serine => cysteine [PATH:ypa01100]
ypa_M00022  Shikimate pathway, phosphoenolpyruvate + erythrose-4P => chorismate [PATH:ypa01100]
ypa_M00023  Tryptophan biosynthesis, chorismate => tryptophan [PATH:ypa01100]
ypa_M00024  Phenylalanine biosynthesis, chorismate => phenylpyruvate => phenylalanine [PATH:ypa01100]
ypa_M00025  Tyrosine biosynthesis, chorismate => HPP => tyrosine [PATH:ypa01100]
ypa_M00026  Histidine biosynthesis, PRPP => histidine [PATH:ypa01100]
ypa_M00028  Ornithine biosynthesis, glutamate => ornithine [PATH:ypa01100]
ypa_M00045  Histidine degradation, histidine => N-formiminoglutamate => glutamate [PATH:ypa01100]
ypa_M00048  De novo purine biosynthesis, PRPP + glutamine => IMP [PATH:ypa01100]
ypa_M00049  Adenine ribonucleotide biosynthesis, IMP => ADP,ATP [PATH:ypa01100]
ypa_M00050  Guanine ribonucleotide biosynthesis, IMP => GDP,GTP [PATH:ypa01100]
ypa_M00051  De novo pyrimidine biosynthesis, glutamine (+ PRPP) => UMP [PATH:ypa01100]
ypa_M00052  Pyrimidine ribonucleotide biosynthesis, UMP => UDP/UTP,CDP/CTP [PATH:ypa01100]
ypa_M00053  Deoxyribonucleotide biosynthesis, ADP/GDP/CDP/UDP => dATP/dGTP/dCTP/dUTP [PATH:ypa01100]
ypa_M00061  D-Glucuronate degradation, D-glucuronate => pyruvate + D-glyceraldehyde 3P [PATH:ypa01100]
ypa_M00063  CMP-KDO biosynthesis [PATH:ypa01100]
ypa_M00064  ADP-L-glycero-D-manno-heptose biosynthesis [PATH:ypa01100]
ypa_M00082  Fatty acid biosynthesis, initiation [PATH:ypa01100]
ypa_M00083  Fatty acid biosynthesis, elongation [PATH:ypa01100]
ypa_M00086  beta-Oxidation, acyl-CoA synthesis [PATH:ypa01100]
ypa_M00087  beta-Oxidation [PATH:ypa01100]
ypa_M00093  Phosphatidylethanolamine (PE) biosynthesis, PA => PS => PE [PATH:ypa01100]
ypa_M00115  NAD biosynthesis, aspartate => quinolinate => NAD [PATH:ypa01100]
ypa_M00116  Menaquinone biosynthesis, chorismate (+ polyprenyl-PP) => menaquinol [PATH:ypa01100]
ypa_M00117  Ubiquinone biosynthesis, prokaryotes, chorismate (+ polyprenyl-PP) => ubiquinol [PATH:ypa01100]
ypa_M00118  Glutathione biosynthesis, glutamate => glutathione [PATH:ypa01100]
ypa_M00119  Pantothenate biosynthesis, valine/L-aspartate => pantothenate [PATH:ypa01100]
ypa_M00120  Coenzyme A biosynthesis, pantothenate => CoA [PATH:ypa01100]
ypa_M00121  Heme biosynthesis, plants and bacteria, glutamate => heme [PATH:ypa01100]
ypa_M00123  Biotin biosynthesis, pimeloyl-ACP/CoA => biotin [PATH:ypa01100]
ypa_M00124  Pyridoxal-P biosynthesis, erythrose-4P => pyridoxal-P [PATH:ypa01100]
ypa_M00125  Riboflavin biosynthesis, plants and bacteria, GTP => riboflavin/FMN/FAD [PATH:ypa01100]
ypa_M00126  Tetrahydrofolate biosynthesis, GTP => THF [PATH:ypa01100]
ypa_M00127  Thiamine biosynthesis, prokaryotes, AIR (+ DXP/tyrosine) => TMP/TPP [PATH:ypa01100]
ypa_M00144  NADH:quinone oxidoreductase, prokaryotes [PATH:ypa01100]
ypa_M00149  Succinate dehydrogenase, prokaryotes [PATH:ypa01100]
ypa_M00150  Fumarate reductase, prokaryotes [PATH:ypa01100]
ypa_M00157  F-type ATPase, prokaryotes and chloroplasts [PATH:ypa01100]
ypa_M00168  CAM (Crassulacean acid metabolism), dark [PATH:ypa01100]
ypa_M00176  Assimilatory sulfate reduction, sulfate => H2S [PATH:ypa01100]
ypa_M00307  Pyruvate oxidation, pyruvate => acetyl-CoA [PATH:ypa01100]
ypa_M00417  Cytochrome o ubiquinol oxidase [PATH:ypa01100]
ypa_M00432  Leucine biosynthesis, 2-oxoisovalerate => 2-oxoisocaproate [PATH:ypa01100]
ypa_M00530  Dissimilatory nitrate reduction, nitrate => ammonia [PATH:ypa01100]
ypa_M00533  Homoprotocatechuate degradation, homoprotocatechuate => 2-oxohept-3-enedioate [PATH:ypa01100]
ypa_M00549  Nucleotide sugar biosynthesis, glucose => UDP-glucose [PATH:ypa01100]
ypa_M00554  Nucleotide sugar biosynthesis, galactose => UDP-galactose [PATH:ypa01100]
ypa_M00555  Betaine biosynthesis, choline => betaine [PATH:ypa01100]
ypa_M00570  Isoleucine biosynthesis, threonine => 2-oxobutanoate => isoleucine [PATH:ypa01100]
ypa_M00579  Phosphate acetyltransferase-acetate kinase pathway, acetyl-CoA => acetate [PATH:ypa01100]
ypa_M00621  Glycine cleavage system [PATH:ypa01100]
ypa_M00631  D-Galacturonate degradation (bacteria), D-galacturonate => pyruvate + D-glyceraldehyde 3P [PATH:ypa01100]
ypa_M00632  Galactose degradation, Leloir pathway, galactose => alpha-D-glucose-1P [PATH:ypa01100]
ypa_M00761  Undecaprenylphosphate alpha-L-Ara4N biosynthesis, UDP-GlcA => undecaprenyl phosphate alpha-L-Ara4N [PATH:ypa01100]
ypa_M00844  Arginine biosynthesis, ornithine => arginine [PATH:ypa01100]
ypa_M00846  Siroheme biosynthesis, glutamyl-tRNA => siroheme [PATH:ypa01100]
ypa_M00854  Glycogen biosynthesis, glucose-1P => glycogen/starch [PATH:ypa01100]
ypa_M00855  Glycogen degradation, glycogen => glucose-6P [PATH:ypa01100]
ypa_M00879  Arginine succinyltransferase pathway, arginine => glutamate [PATH:ypa01100]
ypa_M00880  Molybdenum cofactor biosynthesis, GTP => molybdenum cofactor [PATH:ypa01100]
ypa_M00881  Lipoic acid biosynthesis, plants and bacteria, octanoyl-ACP => dihydrolipoyl-E2/H [PATH:ypa01100]
ypa_M00909  UDP-N-acetyl-D-glucosamine biosynthesis, prokaryotes, glucose => UDP-GlcNAc [PATH:ypa01100]
ypa_M00918  Aerobactin biosynthesis, lysine => aerobactin [PATH:ypa01100]
ypa_M00938  Pyrimidine deoxyribonucleotide biosynthesis, UDP => dTTP [PATH:ypa01100]
ypa_M00970  Proline degradation, proline => glutamate [PATH:ypa01100]
Organism
Yersinia pestis Antiqua (biovar Antiqua) [GN:ypa]
Related
pathway
ypa00010  Glycolysis / Gluconeogenesis
ypa00020  Citrate cycle (TCA cycle)
ypa00030  Pentose phosphate pathway
ypa00040  Pentose and glucuronate interconversions
ypa00051  Fructose and mannose metabolism
ypa00052  Galactose metabolism
ypa00053  Ascorbate and aldarate metabolism
ypa00061  Fatty acid biosynthesis
ypa00071  Fatty acid degradation
ypa00130  Ubiquinone and other terpenoid-quinone biosynthesis
ypa00190  Oxidative phosphorylation
ypa00220  Arginine biosynthesis
ypa00230  Purine metabolism
ypa00240  Pyrimidine metabolism
ypa00250  Alanine, aspartate and glutamate metabolism
ypa00260  Glycine, serine and threonine metabolism
ypa00261  Monobactam biosynthesis
ypa00270  Cysteine and methionine metabolism
ypa00280  Valine, leucine and isoleucine degradation
ypa00290  Valine, leucine and isoleucine biosynthesis
ypa00300  Lysine biosynthesis
ypa00310  Lysine degradation
ypa00330  Arginine and proline metabolism
ypa00332  Carbapenem biosynthesis
ypa00340  Histidine metabolism
ypa00350  Tyrosine metabolism
ypa00360  Phenylalanine metabolism
ypa00361  Chlorocyclohexane and chlorobenzene degradation
ypa00362  Benzoate degradation
ypa00364  Fluorobenzoate degradation
ypa00380  Tryptophan metabolism
ypa00400  Phenylalanine, tyrosine and tryptophan biosynthesis
ypa00401  Novobiocin biosynthesis
ypa00410  beta-Alanine metabolism
ypa00430  Taurine and hypotaurine metabolism
ypa00440  Phosphonate and phosphinate metabolism
ypa00450  Selenocompound metabolism
ypa00460  Cyanoamino acid metabolism
ypa00470  D-Amino acid metabolism
ypa00480  Glutathione metabolism
ypa00500  Starch and sucrose metabolism
ypa00511  Other glycan degradation
ypa00520  Amino sugar and nucleotide sugar metabolism
ypa00521  Streptomycin biosynthesis
ypa00523  Polyketide sugar unit biosynthesis
ypa00525  Acarbose and validamycin biosynthesis
ypa00540  Lipopolysaccharide biosynthesis
ypa00541  O-Antigen nucleotide sugar biosynthesis
ypa00542  O-Antigen repeat unit biosynthesis
ypa00543  Exopolysaccharide biosynthesis
ypa00550  Peptidoglycan biosynthesis
ypa00552  Teichoic acid biosynthesis
ypa00561  Glycerolipid metabolism
ypa00562  Inositol phosphate metabolism
ypa00564  Glycerophospholipid metabolism
ypa00565  Ether lipid metabolism
ypa00592  alpha-Linolenic acid metabolism
ypa00600  Sphingolipid metabolism
ypa00620  Pyruvate metabolism
ypa00623  Toluene degradation
ypa00625  Chloroalkane and chloroalkene degradation
ypa00626  Naphthalene degradation
ypa00627  Aminobenzoate degradation
ypa00630  Glyoxylate and dicarboxylate metabolism
ypa00633  Nitrotoluene degradation
ypa00640  Propanoate metabolism
ypa00650  Butanoate metabolism
ypa00660  C5-Branched dibasic acid metabolism
ypa00670  One carbon pool by folate
ypa00680  Methane metabolism
ypa00730  Thiamine metabolism
ypa00740  Riboflavin metabolism
ypa00750  Vitamin B6 metabolism
ypa00760  Nicotinate and nicotinamide metabolism
ypa00770  Pantothenate and CoA biosynthesis
ypa00780  Biotin metabolism
ypa00785  Lipoic acid metabolism
ypa00790  Folate biosynthesis
ypa00860  Porphyrin metabolism
ypa00900  Terpenoid backbone biosynthesis
ypa00907  Pinene, camphor and geraniol degradation
ypa00910  Nitrogen metabolism
ypa00920  Sulfur metabolism
ypa00930  Caprolactam degradation
ypa00946  Degradation of flavonoids
ypa00997  Biosynthesis of various other secondary metabolites
ypa00999  Biosynthesis of various plant secondary metabolites
ypa01040  Biosynthesis of unsaturated fatty acids
ypa01053  Biosynthesis of siderophore group nonribosomal peptides
KO pathway
ko01100   
LinkDB

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