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Entry
Name
ABC transporters - Yersinia pseudotuberculosis IP 31758 (serotype O:1b)
Description
The ATP-binding cassette (ABC) transporters form one of the largest known protein families, and are widespread in bacteria, archaea, and eukaryotes. They couple ATP hydrolysis to active transport of a wide variety of substrates such as ions, sugars, lipids, sterols, peptides, proteins, and drugs. The structure of a prokaryotic ABC transporter usually consists of three components; typically two integral membrane proteins each having six transmembrane segments, two peripheral proteins that bind and hydrolyze ATP, and a periplasmic (or lipoprotein) substrate-binding protein. Many of the genes for the three components form operons as in fact observed in many bacterial and archaeal genomes. On the other hand, in a typical eukaryotic ABC transporter, the membrane spanning protein and the ATP-binding protein are fused, forming a multi-domain protein with the membrane-spanning domain (MSD) and the nucleotide-binding domain (NBD).
Class
Environmental Information Processing; Membrane transport
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Organism
Yersinia pseudotuberculosis IP 31758 (serotype O:1b) [GN:
ypi ]
Gene
YpsIP31758_1299 cysP; sulfate/thiosulfate ABC transporter, periplasmic sulfate/thiosulfate-binding protein [KO:K02048 ]
YpsIP31758_1350 fbpA; iron(III) ABC transporter, permease protein, periplasmic iron(III)-binding protein [KO:K02012 ]
YpsIP31758_1059 proX; glycine betaine/L-proline ABC transporter, periplasmic glycine betaine-binding protein [KO:K02002 ]
YpsIP31758_2786 quaternary amine uptake ABC transporter (QAT) family, substrate-binding protein [KO:K05845 ]
YpsIP31758_1524 carbohydrate uptake (CUT1 family) ABC transporter, ATP-binding protein [KO:K10111 ] [EC:7.5.2.-]
YpsIP31758_0913 malK1; maltose/maltodextrin ABC transporter, ATP-binding protein [KO:K10111 ] [EC:7.5.2.-]
YpsIP31758_2169 carbohydrate uptake (CUT1 family) ABC transporter, ATP-binding protein [KO:K10111 ] [EC:7.5.2.-]
YpsIP31758_3572 carbohydrate uptake ABC transporter-1 (CUT1) family, ATP-binding protein [KO:K10112 ] [EC:7.5.2.-]
YpsIP31758_0914 malE1; maltose/maltodextrin ABC transporter, periplasmic maltose/maltodextrin-binding protein [KO:K15770 ]
YpsIP31758_1688 togB; oligogalacturonide ABC transporter, periplasmic oligogalacturonide-binding protein [KO:K10192 ]
YpsIP31758_0256 ugpB; glycerol-3-phosphate ABC transporter, periplasmic glycerol-3-phosphate binding protein [KO:K05813 ]
YpsIP31758_2920 gltI; glutamate/aspartate ABC transporter, periplasmic glutamate/aspartate-binding protein [KO:K10001 ]
YpsIP31758_0244 livK; high-affinity branched-chain amino acid ABC transporter, periplasmic leucine-specific-binding protein [KO:K01999 ]
YpsIP31758_0245 livH; high-affinity branched-chain amino acid ABC transporter, permease protein [KO:K01997 ]
YpsIP31758_0246 livM; high-affinity branched-chain amino acid ABC transporter, permease protein [KO:K01998 ]
YpsIP31758_0247 livG; high-affinity branched-chain amino acid ABC transporter, ATP-binding protein [KO:K01995 ]
YpsIP31758_0248 livF; high-affinity branched-chain amino acid ABC transporter, ATP-binding protein [KO:K01996 ]
YpsIP31758_1798 mppA; murein tripeptide ABC transporter, periplasmic murein peptide-binding protein [KO:K15580 ]
YpsIP31758_2441 fepB; ferric enterobactin ABC transporter, ferric enterobactin-binding periplasmic protein FepB [KO:K25286 ]
YpsIP31758_2027 znuA; high-affinity zinc uptake ABC transporter, periplasmic zinc-binding protein [KO:K09815 ]
YpsIP31758_2965 heavy metal ABC transporter (HMT) family, permease protein/ATP-binding protein [KO:K24821 ]
Compound
C00093 sn-Glycerol 3-phosphate
C01153 Orthophosphoric monoester
C01181 4-Trimethylammoniobutanoate
C01279 4-Amino-5-hydroxymethyl-2-methylpyrimidine
C03557 2-Aminoethylphosphonate
C03611 Galactose oligosaccharide
C03619 Methyl beta-D-galactoside
C04114 (E)-4-(Trimethylammonio)but-2-enoate
C06705 Capsular polysaccharide
C19872 N-Formyl-4-amino-5-aminomethyl-2-methylpyrimidine
C20570 alpha-1,5-L-Arabinobiose
C20571 alpha-1,5-L-Arabinotriose
C20572 alpha-1,5-L-Arabinotetraose
Reference
Authors
Tomii K, Kanehisa M.
Title
A comparative analysis of ABC transporters in complete microbial genomes.
Journal
Reference
Authors
Sperandeo P, Lau FK, Carpentieri A, De Castro C, Molinaro A, Deho G, Silhavy TJ, Polissi A
Title
Functional analysis of the protein machinery required for transport of lipopolysaccharide to the outer membrane of Escherichia coli.
Journal
Reference
Authors
Ruiz N, Gronenberg LS, Kahne D, Silhavy TJ
Title
Identification of two inner-membrane proteins required for the transport of lipopolysaccharide to the outer membrane of Escherichia coli.
Journal
Reference
Authors
Omata T, Price GD, Badger MR, Okamura M, Gohta S, Ogawa T
Title
Identification of an ATP-binding cassette transporter involved in bicarbonate uptake in the cyanobacterium Synechococcus sp. strain PCC 7942.
Journal
Reference
Authors
Quintero MJ, Montesinos ML, Herrero A, Flores E
Title
Identification of genes encoding amino acid permeases by inactivation of selected ORFs from the Synechocystis genomic sequence.
Journal
Reference
Authors
Picossi S, Montesinos ML, Pernil R, Lichtle C, Herrero A, Flores E
Title
ABC-type neutral amino acid permease N-I is required for optimal diazotrophic growth and is repressed in the heterocysts of Anabaena sp. strain PCC 7120.
Journal
Reference
Authors
Valladares A, Montesinos ML, Herrero A, Flores E.
Title
An ABC-type, high-affinity urea permease identified in cyanobacteria.
Journal
Reference
Authors
Richard-Fogal CL, Frawley ER, Kranz RG
Title
Topology and function of CcmD in cytochrome c maturation.
Journal
Reference
Authors
Suzuki H, Koyanagi T, Izuka S, Onishi A, Kumagai H
Title
The yliA, -B, -C, and -D genes of Escherichia coli K-12 encode a novel glutathione importer with an ATP-binding cassette.
Journal
Reference
Authors
Novikova M, Metlitskaya A, Datsenko K, Kazakov T, Kazakov A, Wanner B, Severinov K
Title
The Escherichia coli Yej transporter is required for the uptake of translation inhibitor microcin C.
Journal
Reference
Authors
Tikhonova EB, Devroy VK, Lau SY, Zgurskaya HI
Title
Reconstitution of the Escherichia coli macrolide transporter: the periplasmic membrane fusion protein MacA stimulates the ATPase activity of MacB.
Journal
Reference
Authors
Yamanaka H, Kobayashi H, Takahashi E, Okamoto K
Title
MacAB is involved in the secretion of Escherichia coli heat-stable enterotoxin II.
Journal
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