KEGG   PATHWAY: ypn01100
Entry
ypn01100                    Pathway                                
Name
Metabolic pathways - Yersinia pestis Nepal516 (biovar Antiqua)
Class
Pathway map
ypn01100  Metabolic pathways
ypn01100

Module
ypn_M00001  Glycolysis (Embden-Meyerhof pathway), glucose => pyruvate [PATH:ypn01100]
ypn_M00002  Glycolysis, core module involving three-carbon compounds [PATH:ypn01100]
ypn_M00003  Gluconeogenesis, oxaloacetate => fructose-6P [PATH:ypn01100]
ypn_M00004  Pentose phosphate pathway (Pentose phosphate cycle) [PATH:ypn01100]
ypn_M00005  PRPP biosynthesis, ribose 5P => PRPP [PATH:ypn01100]
ypn_M00006  Pentose phosphate pathway, oxidative phase, glucose 6P => ribulose 5P [PATH:ypn01100]
ypn_M00007  Pentose phosphate pathway, non-oxidative phase, fructose 6P => ribose 5P [PATH:ypn01100]
ypn_M00008  Entner-Doudoroff pathway, glucose-6P => glyceraldehyde-3P + pyruvate [PATH:ypn01100]
ypn_M00009  Citrate cycle (TCA cycle, Krebs cycle) [PATH:ypn01100]
ypn_M00010  Citrate cycle, first carbon oxidation, oxaloacetate => 2-oxoglutarate [PATH:ypn01100]
ypn_M00011  Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate [PATH:ypn01100]
ypn_M00012  Glyoxylate cycle [PATH:ypn01100]
ypn_M00015  Proline biosynthesis, glutamate => proline [PATH:ypn01100]
ypn_M00016  Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine [PATH:ypn01100]
ypn_M00017  Methionine biosynthesis, aspartate => homoserine => methionine [PATH:ypn01100]
ypn_M00018  Threonine biosynthesis, aspartate => homoserine => threonine [PATH:ypn01100]
ypn_M00019  Valine/isoleucine biosynthesis, pyruvate => valine / 2-oxobutanoate => isoleucine [PATH:ypn01100]
ypn_M00020  Serine biosynthesis, glycerate-3P => serine [PATH:ypn01100]
ypn_M00021  Cysteine biosynthesis, serine => cysteine [PATH:ypn01100]
ypn_M00022  Shikimate pathway, phosphoenolpyruvate + erythrose-4P => chorismate [PATH:ypn01100]
ypn_M00023  Tryptophan biosynthesis, chorismate => tryptophan [PATH:ypn01100]
ypn_M00024  Phenylalanine biosynthesis, chorismate => phenylpyruvate => phenylalanine [PATH:ypn01100]
ypn_M00025  Tyrosine biosynthesis, chorismate => HPP => tyrosine [PATH:ypn01100]
ypn_M00026  Histidine biosynthesis, PRPP => histidine [PATH:ypn01100]
ypn_M00028  Ornithine biosynthesis, glutamate => ornithine [PATH:ypn01100]
ypn_M00045  Histidine degradation, histidine => N-formiminoglutamate => glutamate [PATH:ypn01100]
ypn_M00048  De novo purine biosynthesis, PRPP + glutamine => IMP [PATH:ypn01100]
ypn_M00049  Adenine ribonucleotide biosynthesis, IMP => ADP,ATP [PATH:ypn01100]
ypn_M00050  Guanine ribonucleotide biosynthesis, IMP => GDP,GTP [PATH:ypn01100]
ypn_M00051  De novo pyrimidine biosynthesis, glutamine (+ PRPP) => UMP [PATH:ypn01100]
ypn_M00052  Pyrimidine ribonucleotide biosynthesis, UMP => UDP/UTP,CDP/CTP [PATH:ypn01100]
ypn_M00053  Deoxyribonucleotide biosynthesis, ADP/GDP/CDP/UDP => dATP/dGTP/dCTP/dUTP [PATH:ypn01100]
ypn_M00061  D-Glucuronate degradation, D-glucuronate => pyruvate + D-glyceraldehyde 3P [PATH:ypn01100]
ypn_M00063  CMP-KDO biosynthesis [PATH:ypn01100]
ypn_M00064  ADP-L-glycero-D-manno-heptose biosynthesis [PATH:ypn01100]
ypn_M00082  Fatty acid biosynthesis, initiation [PATH:ypn01100]
ypn_M00083  Fatty acid biosynthesis, elongation [PATH:ypn01100]
ypn_M00086  beta-Oxidation, acyl-CoA synthesis [PATH:ypn01100]
ypn_M00087  beta-Oxidation [PATH:ypn01100]
ypn_M00093  Phosphatidylethanolamine (PE) biosynthesis, PA => PS => PE [PATH:ypn01100]
ypn_M00115  NAD biosynthesis, aspartate => quinolinate => NAD [PATH:ypn01100]
ypn_M00116  Menaquinone biosynthesis, chorismate (+ polyprenyl-PP) => menaquinol [PATH:ypn01100]
ypn_M00117  Ubiquinone biosynthesis, prokaryotes, chorismate (+ polyprenyl-PP) => ubiquinol [PATH:ypn01100]
ypn_M00118  Glutathione biosynthesis, glutamate => glutathione [PATH:ypn01100]
ypn_M00119  Pantothenate biosynthesis, valine/L-aspartate => pantothenate [PATH:ypn01100]
ypn_M00120  Coenzyme A biosynthesis, pantothenate => CoA [PATH:ypn01100]
ypn_M00121  Heme biosynthesis, plants and bacteria, glutamate => heme [PATH:ypn01100]
ypn_M00123  Biotin biosynthesis, pimeloyl-ACP/CoA => biotin [PATH:ypn01100]
ypn_M00124  Pyridoxal-P biosynthesis, erythrose-4P => pyridoxal-P [PATH:ypn01100]
ypn_M00125  Riboflavin biosynthesis, plants and bacteria, GTP => riboflavin/FMN/FAD [PATH:ypn01100]
ypn_M00126  Tetrahydrofolate biosynthesis, GTP => THF [PATH:ypn01100]
ypn_M00127  Thiamine biosynthesis, prokaryotes, AIR (+ DXP/tyrosine) => TMP/TPP [PATH:ypn01100]
ypn_M00144  NADH:quinone oxidoreductase, prokaryotes [PATH:ypn01100]
ypn_M00149  Succinate dehydrogenase, prokaryotes [PATH:ypn01100]
ypn_M00150  Fumarate reductase, prokaryotes [PATH:ypn01100]
ypn_M00157  F-type ATPase, prokaryotes and chloroplasts [PATH:ypn01100]
ypn_M00168  CAM (Crassulacean acid metabolism), dark [PATH:ypn01100]
ypn_M00176  Assimilatory sulfate reduction, sulfate => H2S [PATH:ypn01100]
ypn_M00307  Pyruvate oxidation, pyruvate => acetyl-CoA [PATH:ypn01100]
ypn_M00417  Cytochrome o ubiquinol oxidase [PATH:ypn01100]
ypn_M00432  Leucine biosynthesis, 2-oxoisovalerate => 2-oxoisocaproate [PATH:ypn01100]
ypn_M00530  Dissimilatory nitrate reduction, nitrate => ammonia [PATH:ypn01100]
ypn_M00533  Homoprotocatechuate degradation, homoprotocatechuate => 2-oxohept-3-enedioate [PATH:ypn01100]
ypn_M00549  Nucleotide sugar biosynthesis, glucose => UDP-glucose [PATH:ypn01100]
ypn_M00554  Nucleotide sugar biosynthesis, galactose => UDP-galactose [PATH:ypn01100]
ypn_M00555  Betaine biosynthesis, choline => betaine [PATH:ypn01100]
ypn_M00570  Isoleucine biosynthesis, threonine => 2-oxobutanoate => isoleucine [PATH:ypn01100]
ypn_M00579  Phosphate acetyltransferase-acetate kinase pathway, acetyl-CoA => acetate [PATH:ypn01100]
ypn_M00621  Glycine cleavage system [PATH:ypn01100]
ypn_M00631  D-Galacturonate degradation (bacteria), D-galacturonate => pyruvate + D-glyceraldehyde 3P [PATH:ypn01100]
ypn_M00632  Galactose degradation, Leloir pathway, galactose => alpha-D-glucose-1P [PATH:ypn01100]
ypn_M00761  Undecaprenylphosphate alpha-L-Ara4N biosynthesis, UDP-GlcA => undecaprenyl phosphate alpha-L-Ara4N [PATH:ypn01100]
ypn_M00844  Arginine biosynthesis, ornithine => arginine [PATH:ypn01100]
ypn_M00846  Siroheme biosynthesis, glutamyl-tRNA => siroheme [PATH:ypn01100]
ypn_M00854  Glycogen biosynthesis, glucose-1P => glycogen/starch [PATH:ypn01100]
ypn_M00855  Glycogen degradation, glycogen => glucose-6P [PATH:ypn01100]
ypn_M00880  Molybdenum cofactor biosynthesis, GTP => molybdenum cofactor [PATH:ypn01100]
ypn_M00881  Lipoic acid biosynthesis, plants and bacteria, octanoyl-ACP => dihydrolipoyl-E2/H [PATH:ypn01100]
ypn_M00909  UDP-N-acetyl-D-glucosamine biosynthesis, prokaryotes, glucose => UDP-GlcNAc [PATH:ypn01100]
ypn_M00918  Aerobactin biosynthesis, lysine => aerobactin [PATH:ypn01100]
ypn_M00938  Pyrimidine deoxyribonucleotide biosynthesis, UDP => dTTP [PATH:ypn01100]
ypn_M00970  Proline degradation, proline => glutamate [PATH:ypn01100]
Organism
Yersinia pestis Nepal516 (biovar Antiqua) [GN:ypn]
Related
pathway
ypn00010  Glycolysis / Gluconeogenesis
ypn00020  Citrate cycle (TCA cycle)
ypn00030  Pentose phosphate pathway
ypn00040  Pentose and glucuronate interconversions
ypn00051  Fructose and mannose metabolism
ypn00052  Galactose metabolism
ypn00053  Ascorbate and aldarate metabolism
ypn00061  Fatty acid biosynthesis
ypn00071  Fatty acid degradation
ypn00130  Ubiquinone and other terpenoid-quinone biosynthesis
ypn00190  Oxidative phosphorylation
ypn00220  Arginine biosynthesis
ypn00230  Purine metabolism
ypn00240  Pyrimidine metabolism
ypn00250  Alanine, aspartate and glutamate metabolism
ypn00260  Glycine, serine and threonine metabolism
ypn00261  Monobactam biosynthesis
ypn00270  Cysteine and methionine metabolism
ypn00280  Valine, leucine and isoleucine degradation
ypn00290  Valine, leucine and isoleucine biosynthesis
ypn00300  Lysine biosynthesis
ypn00310  Lysine degradation
ypn00330  Arginine and proline metabolism
ypn00332  Carbapenem biosynthesis
ypn00340  Histidine metabolism
ypn00350  Tyrosine metabolism
ypn00360  Phenylalanine metabolism
ypn00361  Chlorocyclohexane and chlorobenzene degradation
ypn00362  Benzoate degradation
ypn00364  Fluorobenzoate degradation
ypn00380  Tryptophan metabolism
ypn00400  Phenylalanine, tyrosine and tryptophan biosynthesis
ypn00401  Novobiocin biosynthesis
ypn00410  beta-Alanine metabolism
ypn00430  Taurine and hypotaurine metabolism
ypn00440  Phosphonate and phosphinate metabolism
ypn00450  Selenocompound metabolism
ypn00460  Cyanoamino acid metabolism
ypn00470  D-Amino acid metabolism
ypn00480  Glutathione metabolism
ypn00500  Starch and sucrose metabolism
ypn00511  Other glycan degradation
ypn00520  Amino sugar and nucleotide sugar metabolism
ypn00521  Streptomycin biosynthesis
ypn00523  Polyketide sugar unit biosynthesis
ypn00525  Acarbose and validamycin biosynthesis
ypn00540  Lipopolysaccharide biosynthesis
ypn00541  O-Antigen nucleotide sugar biosynthesis
ypn00542  O-Antigen repeat unit biosynthesis
ypn00543  Exopolysaccharide biosynthesis
ypn00550  Peptidoglycan biosynthesis
ypn00552  Teichoic acid biosynthesis
ypn00561  Glycerolipid metabolism
ypn00562  Inositol phosphate metabolism
ypn00564  Glycerophospholipid metabolism
ypn00565  Ether lipid metabolism
ypn00592  alpha-Linolenic acid metabolism
ypn00600  Sphingolipid metabolism
ypn00620  Pyruvate metabolism
ypn00623  Toluene degradation
ypn00625  Chloroalkane and chloroalkene degradation
ypn00626  Naphthalene degradation
ypn00627  Aminobenzoate degradation
ypn00630  Glyoxylate and dicarboxylate metabolism
ypn00633  Nitrotoluene degradation
ypn00640  Propanoate metabolism
ypn00650  Butanoate metabolism
ypn00660  C5-Branched dibasic acid metabolism
ypn00670  One carbon pool by folate
ypn00680  Methane metabolism
ypn00730  Thiamine metabolism
ypn00740  Riboflavin metabolism
ypn00750  Vitamin B6 metabolism
ypn00760  Nicotinate and nicotinamide metabolism
ypn00770  Pantothenate and CoA biosynthesis
ypn00780  Biotin metabolism
ypn00785  Lipoic acid metabolism
ypn00790  Folate biosynthesis
ypn00860  Porphyrin metabolism
ypn00900  Terpenoid backbone biosynthesis
ypn00907  Pinene, camphor and geraniol degradation
ypn00910  Nitrogen metabolism
ypn00920  Sulfur metabolism
ypn00930  Caprolactam degradation
ypn00946  Degradation of flavonoids
ypn00997  Biosynthesis of various other secondary metabolites
ypn00999  Biosynthesis of various plant secondary metabolites
ypn01040  Biosynthesis of unsaturated fatty acids
ypn01053  Biosynthesis of siderophore group nonribosomal peptides
KO pathway
ko01100   
LinkDB

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