KEGG   PATHWAY: ypn01200
Entry
ypn01200                    Pathway                                
Name
Carbon metabolism - Yersinia pestis Nepal516 (biovar Antiqua)
Description
Carbon metabolism is the most basic aspect of life. This map presents an overall view of central carbon metabolism, where the number of carbons is shown for each compound denoted by a circle, excluding a cofactor (CoA, CoM, THF, or THMPT) that is replaced by an asterisk. The map contains carbon utilization pathways of glycolysis (map00010), pentose phosphate pathway (map00030), and citrate cycle (map00020), and six known carbon fixation pathways (map00710 and map00720) as well as some pathways of methane metabolism (map00680). The six carbon fixation pathways are: (1) reductive pentose phosphate cycle (Calvin cycle) in plants and cyanobacteria that perform oxygenic photosynthesis, (2) reductive citrate cycle in photosynthetic green sulfur bacteria and some chemolithoautotrophs, (3) 3-hydroxypropionate bi-cycle in photosynthetic green nonsulfur bacteria, two variants of 4-hydroxybutyrate pathways in Crenarchaeota called (4) hydroxypropionate-hydroxybutyrate cycle and (5) dicarboxylate-hydroxybutyrate cycle, and (6) reductive acetyl-CoA pathway in methanogenic bacteria.
Class
Pathway map
ypn01200  Carbon metabolism
ypn01200

Module
ypn_M00001  Glycolysis (Embden-Meyerhof pathway), glucose => pyruvate [PATH:ypn01200]
ypn_M00002  Glycolysis, core module involving three-carbon compounds [PATH:ypn01200]
ypn_M00004  Pentose phosphate pathway (Pentose phosphate cycle) [PATH:ypn01200]
ypn_M00005  PRPP biosynthesis, ribose 5P => PRPP [PATH:ypn01200]
ypn_M00006  Pentose phosphate pathway, oxidative phase, glucose 6P => ribulose 5P [PATH:ypn01200]
ypn_M00007  Pentose phosphate pathway, non-oxidative phase, fructose 6P => ribose 5P [PATH:ypn01200]
ypn_M00008  Entner-Doudoroff pathway, glucose-6P => glyceraldehyde-3P + pyruvate [PATH:ypn01200]
ypn_M00009  Citrate cycle (TCA cycle, Krebs cycle) [PATH:ypn01200]
ypn_M00010  Citrate cycle, first carbon oxidation, oxaloacetate => 2-oxoglutarate [PATH:ypn01200]
ypn_M00011  Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate [PATH:ypn01200]
ypn_M00012  Glyoxylate cycle [PATH:ypn01200]
ypn_M00020  Serine biosynthesis, glycerate-3P => serine [PATH:ypn01200]
ypn_M00021  Cysteine biosynthesis, serine => cysteine [PATH:ypn01200]
ypn_M00168  CAM (Crassulacean acid metabolism), dark [PATH:ypn01200]
ypn_M00307  Pyruvate oxidation, pyruvate => acetyl-CoA [PATH:ypn01200]
ypn_M00579  Phosphate acetyltransferase-acetate kinase pathway, acetyl-CoA => acetate [PATH:ypn01200]
ypn_M00621  Glycine cleavage system [PATH:ypn01200]
Organism
Yersinia pestis Nepal516 (biovar Antiqua) [GN:ypn]
KO pathway
ko01200   
LinkDB

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