KEGG   PATHWAY: ypr00010
Entry
ypr00010                    Pathway                                
Name
Glycolysis / Gluconeogenesis - Yersinia pseudotuberculosis EP2/+
Description
Glycolysis is the process of converting glucose into pyruvate and generating small amounts of ATP (energy) and NADH (reducing power). It is a central pathway that produces important precursor metabolites: six-carbon compounds of glucose-6P and fructose-6P and three-carbon compounds of glycerone-P, glyceraldehyde-3P, glycerate-3P, phosphoenolpyruvate, and pyruvate [MD:M00001]. Acetyl-CoA, another important precursor metabolite, is produced by oxidative decarboxylation of pyruvate [MD:M00307]. When the enzyme genes of this pathway are examined in completely sequenced genomes, the reaction steps of three-carbon compounds from glycerone-P to pyruvate form a conserved core module [MD:M00002], which is found in almost all organisms and which sometimes contains operon structures in bacterial genomes. Gluconeogenesis is a synthesis pathway of glucose from noncarbohydrate precursors. It is essentially a reversal of glycolysis with minor variations of alternative paths [MD:M00003].
Class
Metabolism; Carbohydrate metabolism
Pathway map
ypr00010  Glycolysis / Gluconeogenesis
ypr00010

Module
ypr_M00001  Glycolysis (Embden-Meyerhof pathway), glucose => pyruvate [PATH:ypr00010]
ypr_M00002  Glycolysis, core module involving three-carbon compounds [PATH:ypr00010]
ypr_M00003  Gluconeogenesis, oxaloacetate => fructose-6P [PATH:ypr00010]
ypr_M00307  Pyruvate oxidation, pyruvate => acetyl-CoA [PATH:ypr00010]
Other DBs
GO: 0006096 0006094
Organism
Yersinia pseudotuberculosis EP2/+ [GN:ypr]
Gene
BZ20_3508  glk; glucokinase [KO:K00845] [EC:2.7.1.2]
BZ20_2458  pgi; glucose-6-phosphate isomerase [KO:K01810] [EC:5.3.1.9]
BZ20_2048  pfkA; 6-phosphofructokinase [KO:K00850] [EC:2.7.1.11]
BZ20_1652  fructose-1-6-bisphosphatase family protein [KO:K03841] [EC:3.1.3.11]
BZ20_2036  glpX; fructose-1,6-bisphosphatase, class II [KO:K02446] [EC:3.1.3.11]
BZ20_2290  ketose-bisphosphate aldolase family protein [KO:K01624] [EC:4.1.2.13]
BZ20_3001  fbaA; fructose-bisphosphate aldolase, class II [KO:K01624] [EC:4.1.2.13]
BZ20_2040  tpiA; triose-phosphate isomerase [KO:K01803] [EC:5.3.1.1]
BZ20_27  gap; glyceraldehyde-3-phosphate dehydrogenase, type I [KO:K00134] [EC:1.2.1.12]
BZ20_3000  phosphoglycerate kinase family protein [KO:K00927] [EC:2.7.2.3]
BZ20_829  gpmA; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [KO:K01834] [EC:5.4.2.11]
BZ20_1499  putative phosphoglycerate mutase gpmB [KO:K15634] [EC:5.4.2.11]
BZ20_2061  gpmI; phosphoglycerate mutase [KO:K15633] [EC:5.4.2.12]
BZ20_1331  eno; phosphopyruvate hydratase [KO:K01689] [EC:4.2.1.11]
BZ20_65  pyk; pyruvate kinase [KO:K00873] [EC:2.7.1.40]
BZ20_3937  pyk; pyruvate kinase [KO:K00873] [EC:2.7.1.40]
BZ20_3925  ppsA; phosphoenolpyruvate synthase [KO:K01007] [EC:2.7.9.2]
BZ20_1373  aceE; pyruvate dehydrogenase (acetyl-transferring), homodimeric type [KO:K00163] [EC:1.2.4.1]
BZ20_1372  aceF; dihydrolipoyllysine-residue acetyltransferase [KO:K00627] [EC:2.3.1.12]
BZ20_1371  lpdA; dihydrolipoyl dehydrogenase [KO:K00382] [EC:1.8.1.4]
BZ20_2004  glucose inhibited division A family protein [KO:K00382] [EC:1.8.1.4]
BZ20_3999  nifJ; ferredoxin (flavodoxin) oxidoreductase [KO:K03737] [EC:1.2.7.1 1.2.7.-]
BZ20_447  S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase [KO:K00121] [EC:1.1.1.284 1.1.1.1]
BZ20_6  adhE; aldehyde-alcohol dehydrogenase [KO:K04072] [EC:1.2.1.10 1.1.1.1]
BZ20_4054  aldehyde dehydrogenase family protein [KO:K00138] [EC:1.2.1.-]
BZ20_1803  acs; acetate--CoA ligase [KO:K01895] [EC:6.2.1.1]
BZ20_827  galM; galactose mutarotase [KO:K01785] [EC:5.1.3.3]
BZ20_2095  HAD hydrolase, IA, variant 3 family protein [KO:K20866] [EC:3.1.3.10]
BZ20_3249  pgm; phosphoglucomutase, alpha-D-glucose phosphate-specific [KO:K01835] [EC:5.4.2.2]
BZ20_28  aldose 1-epimerase family protein [KO:K01792] [EC:5.1.3.15]
BZ20_2332  pckA; phosphoenolpyruvate carboxykinase [KO:K01610] [EC:4.1.1.49]
BZ20_2360  hypothetical protein [KO:K01222] [EC:3.2.1.86]
BZ20_694  glycosyl hydrolase 1 family protein [KO:K01223] [EC:3.2.1.86]
BZ20_3484  crr; glucose-specific phosphotransferase enzyme IIA component [KO:K02777] [EC:2.7.1.-]
BZ20_3745  ptsG; PTS system glucose-specific EIICB component [KO:K02779] [EC:2.7.1.199]
Compound
C00022  Pyruvate
C00024  Acetyl-CoA
C00031  D-Glucose
C00033  Acetate
C00036  Oxaloacetate
C00068  Thiamin diphosphate
C00074  Phosphoenolpyruvate
C00084  Acetaldehyde
C00085  D-Fructose 6-phosphate
C00103  D-Glucose 1-phosphate
C00111  Glycerone phosphate
C00118  D-Glyceraldehyde 3-phosphate
C00186  (S)-Lactate
C00197  3-Phospho-D-glycerate
C00221  beta-D-Glucose
C00236  3-Phospho-D-glyceroyl phosphate
C00267  alpha-D-Glucose
C00354  D-Fructose 1,6-bisphosphate
C00469  Ethanol
C00631  2-Phospho-D-glycerate
C00668  alpha-D-Glucose 6-phosphate
C01159  2,3-Bisphospho-D-glycerate
C01172  beta-D-Glucose 6-phosphate
C01451  Salicin
C05125  2-(alpha-Hydroxyethyl)thiamine diphosphate
C06186  Arbutin
C06187  Arbutin 6-phosphate
C06188  Salicin 6-phosphate
C15972  Enzyme N6-(lipoyl)lysine
C15973  Enzyme N6-(dihydrolipoyl)lysine
C16255  [Dihydrolipoyllysine-residue acetyltransferase] S-acetyldihydrolipoyllysine
Reference
  Authors
Nishizuka Y (ed).
  Title
[Metabolic Maps] (In Japanese)
  Journal
Tokyo Kagaku Dojin (1980)
Reference
  Authors
Nishizuka Y, Seyama Y, Ikai A, Ishimura Y, Kawaguchi A (eds).
  Title
[Cellular Functions and Metabolic Maps] (In Japanese)
  Journal
Tokyo Kagaku Dojin (1997)
Reference
  Authors
Michal G.
  Title
Biochemical Pathways
  Journal
Wiley (1999)
Related
pathway
ypr00020  Citrate cycle (TCA cycle)
ypr00030  Pentose phosphate pathway
ypr00500  Starch and sucrose metabolism
ypr00620  Pyruvate metabolism
ypr00640  Propanoate metabolism
KO pathway
ko00010   
LinkDB

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