Pasteurella atlantica: KGI96_07980
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Entry
KGI96_07980 CDS
T07499
Symbol
rluD
Name
(GenBank) 23S rRNA pseudouridine(1911/1915/1917) synthase RluD
KO
K06180
23S rRNA pseudouridine1911/1915/1917 synthase [EC:
5.4.99.23
]
Organism
patl
Pasteurella atlantica
Brite
KEGG Orthology (KO) [BR:
patl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
patl03009
]
KGI96_07980 (rluD)
Enzymes [BR:
patl01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.23 23S rRNA pseudouridine1911/1915/1917 synthase
KGI96_07980 (rluD)
Ribosome biogenesis [BR:
patl03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
KGI96_07980 (rluD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_2
S4
NepR
S4_2
ThiS
Motif
Other DBs
NCBI-ProteinID:
QVE20283
LinkDB
All DBs
Position
complement(1654594..1655571)
Genome browser
AA seq
325 aa
AA seq
DB search
MAQEITLKTEISLDLIGSRLDQALAQSFPDYSRTRLKAWIDNDRVKVNGKIVNKAREKVF
GGEEIEILAEMEDEVRFEAQNIALDIVYEDEDILVINKPKGLVVHPGAGNPDGTVLNALL
HHHPAIIEVPRAGIVHRLDKDTTGLMVVAKTIPAQTHLVAALQKRRITREYEAIASGVMT
QGGKVDEPMARHPTKRIAMAVHPMGKPAVTHYRIMQKFRNHTRLRLRLETGRTHQIRVHM
AHIAHPLLGDQVYGGRPRPPKGASEEFLTVLRDFQRQALHAAMLRLEHPITKEIMEWHAP
LPDDFVELLEALKTDYELYKEELDY
NT seq
978 nt
NT seq
+upstream
nt +downstream
nt
atggctcaagaaattacattaaaaactgaaatctcattagatttaatcggttctcgctta
gatcaagcattagcacaaagttttcccgattattctcgtactcgtttgaaggcgtggatt
gataatgatcgtgtaaaagtgaatggtaaaattgtaaataaagcacgtgaaaaagttttt
ggtggagaagagattgaaattcttgctgaaatggaagatgaagttcgttttgaagcacaa
aatattgcacttgatattgtttatgaagatgaagatattttggtgattaataaacctaaa
ggtcttgtcgttcatcctggtgctggcaatccagacggtacggtgttaaatgcactgtta
catcatcaccctgcgattattgaagtccctcgtgcaggtattgtacatcgtttagataag
gataccacaggcttaatggtggttgcaaaaaccattcccgcacaaactcatttagtcgca
gcattacaaaaacgccgtattacgcgtgaatatgaagctatcgccagtggtgtgatgaca
caaggtggaaaagttgatgaaccaatggctcgtcacccaaccaaacgtattgcaatggcg
gtacacccaatgggaaaacctgcggttactcactatcgtattatgcaaaagttccgtaat
catacacgtttacgtttacgcttagaaacggggagaacccatcaaattcgtgtgcatatg
gcacatattgctcatccattgttaggcgatcaagtttatggcggacgtccacgcccacca
aaaggtgcgagtgaagaatttttaactgtgctacgtgatttccaacgtcaagcactgcac
gcagcaatgcttcgcttagagcatccaataacgaaagaaataatggagtggcacgcacca
ttgcctgatgattttgtagaattactagaggctctgaaaacggattatgagttgtataaa
gaagagttagattattag
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